G2189403



Basic Information


Item Value
gene id G2189403
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 46855803 ~ 46856049 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU2503797
ATGTGTTCTatatgaaccctaaccctaacataaccctaacctaatgtgttttatatataaccctaacataaccctaacctaatgtgttttatatataaccctaaccctaacataaccctaacctaatgtgttttatatataaccctaaccctaacataaccctaacctaatgtgttttatatataaccctaaccctaacataaccctaacctaat

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU2503797 True 215 lncRNA 0.32 2 46855803 46856049

Neighbor


gene id symbol gene type direction distance location
si:dkey-175g6.2 NA coding downstream 172062 46673911 ~ 46683741 (-)
LOC118945322 NA coding downstream 287005 46567431 ~ 46568798 (-)
LOC118945303 NA coding downstream 437194 46417993 ~ 46418609 (-)
tmem135 tmem135 coding downstream 502153 46325201 ~ 46353650 (-)
grm5a LOC100700102 coding downstream 560940 46218563 ~ 46294863 (-)
ddx52 ddx52 coding upstream 34920 46890969 ~ 46934960 (-)
LOC110510303 LOC106563938 coding upstream 83544 46939593 ~ 46948417 (-)
pigs LOC106592729 coding upstream 101896 46957945 ~ 46972326 (-)
aldocb aldoc coding upstream 128205 46984254 ~ 47015337 (-)
LOC118945349 NA coding upstream 160133 47016181 ~ 47021968 (-)
G2189392 NA non-coding downstream 10814 46844613 ~ 46844989 (-)
G2189385 NA non-coding downstream 12222 46835937 ~ 46843581 (-)
G2189387 NA non-coding downstream 15470 46839340 ~ 46840333 (-)
G2189239 NA non-coding downstream 54737 46800855 ~ 46801066 (-)
G2189238 NA non-coding downstream 55992 46799270 ~ 46799811 (-)
G2189389 NA non-coding upstream 41047 46897096 ~ 46898753 (-)
G2189398 NA non-coding upstream 74109 46930158 ~ 46931864 (-)
G2189454 NA non-coding upstream 140250 46996299 ~ 46996687 (-)
G2189457 NA non-coding upstream 143611 46999660 ~ 47000016 (-)
G2189461 NA non-coding upstream 152441 47008490 ~ 47010493 (-)
G2189204 NA other downstream 85842 46769683 ~ 46769961 (-)
G2189115 NA other downstream 219635 46634238 ~ 46636168 (-)
G2188868 chordc1 other downstream 697997 46143319 ~ 46157806 (-)
G2188877 NA other downstream 771019 46081386 ~ 46084784 (-)
G2188420 NA other downstream 1051616 45802955 ~ 45804187 (-)
G2189814 NA other upstream 387000 47243049 ~ 47270482 (-)
G2189794 NA other upstream 429935 47285984 ~ 47287003 (-)
G2189898 NA other upstream 563885 47419934 ~ 47428596 (-)
G2189978 NA other upstream 747102 47603151 ~ 47604511 (-)

Expression



Co-expression Network