Gene
RNA
| Item | Value |
|---|---|
| gene id | G2189323 |
| gene name | LOC107735056 |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048593.1 |
| NCBI id | CM023247.2 |
| chromosome length | 47748341 |
| location | 47070742 ~ 47077473 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: 60S ribosomal protein L23a |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2503678 | False | 539 | TUCP | 0.53 | 5 | 47070742 | 47077473 |
| TU2503679 | False | 531 | TUCP | 0.52 | 4 | 47070742 | 47076238 |
| TU2503681 | False | 533 | lncRNA | 0.52 | 4 | 47070742 | 47076238 |
| TU2503680 | True | 733 | TUCP | 0.47 | 2 | 47075141 | 47076238 |
47,064,000
47,065,000
47,066,000
47,067,000
47,068,000
47,069,000
47,070,000
47,071,000
47,072,000
47,073,000
47,074,000
47,075,000
47,076,000
47,077,000
47,078,000
47,079,000
47,080,000
47,081,000
NC_048593.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110510302 | LOC106563936 | coding | upstream | 182208 | 46863262 ~ 46888534 (+) |
| inpp5kb | LOC106563939 | coding | upstream | 435022 | 46588208 ~ 46636264 (+) |
| LOC118945337 | LOC108237022 | coding | upstream | 506743 | 46504069 ~ 46563999 (+) |
| LOC110517633 | LOC106604056 | coding | upstream | 582003 | 46446951 ~ 46489028 (+) |
| LOC110517634 | LOC106563910 | coding | upstream | 630866 | 46377726 ~ 46439876 (+) |
| polq | LOC106595115 | coding | downstream | 29175 | 47105413 ~ 47186621 (+) |
| c1qa | c1qc | coding | downstream | 166767 | 47243005 ~ 47270503 (+) |
| c1qc | LOC106591842 | coding | downstream | 203859 | 47280097 ~ 47287013 (+) |
| c1qb | c1qb | coding | downstream | 227800 | 47304038 ~ 47314715 (+) |
| hoatz | LOC100286538 | coding | downstream | 267321 | 47343559 ~ 47359357 (+) |
| G2189370 | NA | non-coding | upstream | 1391 | 47069150 ~ 47069351 (+) |
| G2189346 | LOC106563969 | non-coding | upstream | 44373 | 47025764 ~ 47026369 (+) |
| G2189345 | NA | non-coding | upstream | 45194 | 47025136 ~ 47025548 (+) |
| G2189331 | NA | non-coding | upstream | 54992 | 47014952 ~ 47015750 (+) |
| G2189339 | NA | non-coding | upstream | 59635 | 47010569 ~ 47011107 (+) |
| G2189324 | NA | non-coding | downstream | 1529 | 47077767 ~ 47078318 (+) |
| G2189372 | NA | non-coding | downstream | 3660 | 47079898 ~ 47080419 (+) |
| G2189375 | NA | non-coding | downstream | 8024 | 47084262 ~ 47084468 (+) |
| G2189378 | NA | non-coding | downstream | 15285 | 47091523 ~ 47092062 (+) |
| G2189379 | NA | non-coding | downstream | 16042 | 47092280 ~ 47092708 (+) |
| G2189283 | NA | other | upstream | 127983 | 46895556 ~ 46942759 (+) |
| G2188866 | NA | other | upstream | 312722 | 46757250 ~ 46758020 (+) |
| G2188775 | NA | other | upstream | 512186 | 46557448 ~ 46558556 (+) |
| G2189534 | NA | other | downstream | 88823 | 47165061 ~ 47165526 (+) |
| G2189507 | LOC106563947 | other | downstream | 111317 | 47187555 ~ 47224353 (+) |
| G2189691 | NA | other | downstream | 489011 | 47565249 ~ 47567756 (+) |
| G2189694 | NA | other | downstream | 551064 | 47627302 ~ 47639517 (+) |
| G2189327 | NA | non-coding | upstream | 54970 | 46983261 ~ 47015772 (+) |
