Gene
RNA
| Item | Value |
|---|---|
| gene id | G2189537 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048593.1 |
| NCBI id | CM023247.2 |
| chromosome length | 47748341 |
| location | 47172741 ~ 47173070 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2503988 | True | 330 | lncRNA | 0.48 | 1 | 47172741 | 47173070 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110510302 | LOC106563936 | coding | upstream | 284207 | 46863262 ~ 46888534 (+) |
| inpp5kb | LOC106563939 | coding | upstream | 537021 | 46588208 ~ 46636264 (+) |
| LOC118945337 | LOC108237022 | coding | upstream | 608742 | 46504069 ~ 46563999 (+) |
| LOC110517633 | LOC106604056 | coding | upstream | 684002 | 46446951 ~ 46489028 (+) |
| LOC110517634 | LOC106563910 | coding | upstream | 732865 | 46377726 ~ 46439876 (+) |
| c1qa | c1qc | coding | downstream | 69935 | 47243005 ~ 47270503 (+) |
| c1qc | LOC106591842 | coding | downstream | 107027 | 47280097 ~ 47287013 (+) |
| c1qb | c1qb | coding | downstream | 130968 | 47304038 ~ 47314715 (+) |
| hoatz | LOC100286538 | coding | downstream | 170489 | 47343559 ~ 47359357 (+) |
| layna | LOC106563960 | coding | downstream | 194024 | 47367094 ~ 47385736 (+) |
| G2189535 | NA | non-coding | upstream | 2254 | 47169230 ~ 47170487 (+) |
| G2189531 | NA | non-coding | upstream | 15726 | 47156542 ~ 47157015 (+) |
| G2189527 | NA | non-coding | upstream | 26795 | 47144839 ~ 47145946 (+) |
| G2189522 | NA | non-coding | upstream | 38039 | 47134465 ~ 47134702 (+) |
| G2189384 | NA | non-coding | upstream | 72520 | 47099883 ~ 47100221 (+) |
| G2189538 | NA | non-coding | downstream | 478 | 47173548 ~ 47173837 (+) |
| polq | LOC106595115 | non-coding | downstream | 5298 | 47105413 ~ 47186621 (+) |
| G2189542 | NA | non-coding | downstream | 15203 | 47188273 ~ 47190605 (+) |
| G2189544 | NA | non-coding | downstream | 23849 | 47196919 ~ 47199751 (+) |
| G2189551 | NA | non-coding | downstream | 57365 | 47230435 ~ 47231210 (+) |
| G2189534 | NA | other | upstream | 7215 | 47165061 ~ 47165526 (+) |
| G2189323 | LOC107735056 | other | upstream | 95268 | 47070742 ~ 47077473 (+) |
| G2189283 | NA | other | upstream | 229982 | 46895556 ~ 46942759 (+) |
| G2188866 | NA | other | upstream | 414721 | 46757250 ~ 46758020 (+) |
| G2189507 | LOC106563947 | other | downstream | 14485 | 47187555 ~ 47224353 (+) |
| G2189691 | NA | other | downstream | 392179 | 47565249 ~ 47567756 (+) |
| G2189694 | NA | other | downstream | 454232 | 47627302 ~ 47639517 (+) |
