XLOC_004078 (CR589944.2)



Basic Information


Item Value
gene id XLOC_004078
gene name CR589944.2
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007122.7
NCBI id CM002895.2
chromosome length 45484837
location 17906902 ~ 17908682 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00007777
AttacaagaagaaaaagaagtttgTTCTTAACATTGGATTCCTGTCAGAAAGTCCACAACAAGATCCTTGAGCAAGATCAAACACGCTTGGCACAGAAGAGGTCAGTTTATGCAAGTCATAGCTGAAATCATGCATGTGCTTAGCCATCTTACAAATCTGTGTctaagattcata

Function


GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000100891

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00007777 True 175 processed_transcript 0.38 2 17906902 17908682

Neighbor


gene id symbol gene type direction distance location
XLOC_004077 uba3 coding downstream 103765 17785182 ~ 17803137 (-)
XLOC_004076 tmf1 coding downstream 123972 17757342 ~ 17782930 (-)
XLOC_004075 eogt coding downstream 151458 17726649 ~ 17755444 (-)
XLOC_004074 tafa4b coding downstream 192915 17596979 ~ 17713987 (-)
XLOC_004073 NA coding downstream 677049 17223850 ~ 17229853 (-)
XLOC_004079 cishb coding upstream 50825 17959507 ~ 17964525 (-)
XLOC_004080 twf2b coding upstream 56416 17965098 ~ 17981427 (-)
XLOC_004081 qrich1 coding upstream 88721 17997403 ~ 18107447 (-)
XLOC_004082 LO018315.7 coding upstream 235603 18144285 ~ 18148488 (-)
XLOC_004083 mustn1b coding upstream 341127 18249809 ~ 18253111 (-)
XLOC_004063 CR854846.1 misc downstream 1779224 16127382 ~ 16127678 (-)
XLOC_004019 CR450764.8 misc downstream 5215211 12691395 ~ 12691691 (-)
XLOC_004015 CR450764.4 misc downstream 5285135 12621518 ~ 12621767 (-)
XLOC_004013 CABZ01022569.1 misc downstream 5315606 12590999 ~ 12591296 (-)
XLOC_004008 BX000700.19 misc downstream 5393640 12512966 ~ 12513262 (-)
XLOC_004072 CR769769.3 non-coding downstream 759441 17144309 ~ 17147461 (-)
XLOC_004071 CR769769.2 non-coding downstream 808969 17093753 ~ 17097933 (-)
XLOC_004070 NA non-coding downstream 815707 17081422 ~ 17091195 (-)
XLOC_004068 AL844563.1 non-coding downstream 1231738 16669218 ~ 16675164 (-)
XLOC_004092 NA non-coding upstream 941244 18849926 ~ 18852369 (-)
XLOC_004093 NA non-coding upstream 1179732 19088414 ~ 19091101 (-)
XLOC_004095 CT737428.1 non-coding upstream 1271770 19180452 ~ 19180555 (-)
XLOC_004096 BX511159.1 non-coding upstream 1507496 19416178 ~ 19416315 (-)

Expression



Co-expression Network