LOC118945791 (LOC106584811)


Basic Information

Item Value
gene id LOC118945791
gene name LOC106584811
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050570.1
NCBI id CM025857.1
chromosome length 46327593
location 3813375 ~ 3818776 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036968934.1
GTGAGGTTGCAGGAACAGAATCTAGAATATAATCTCTGTATTCTATGGTAGTAAGGTTGCAGGAACAGAATCTATAATATAATCTCTGTATTCTATGGTAGTAAGGTTGCAGGAACAGAATCTAGAATATAATCTCTGTATTCTATGGTAGTAAGGTTGCAGGAACAGAATCTATAATATAATCTCTGTATTCTATGGTAGTAAGGTTGCAGGAACAGAATCTAGAATATAATCTCTGTATTCTATGGTAGTAAAGTTGCAGGAACAGAATCTAGAATATAATCTCTGTATTCTATGGTAGTAAGGTTGCAGGAACAGAATCTAGAATATAATCTCTGTATTCTATGGTAGTAAGGTTGCAGGAACAGAATATAGAATCAAATGACTGCAAAACCAACAAGCCAAGCTTCACTCTCCAAGGAGGACCTGCTTTGTCCTGTGTGTTGTGAGGTATTCAGCCTTCCCGTCCTGCTGAAATGTGGCCATAACTCCTGTAAGGAGTGTTTACAGAAGCTGTGGGAATGGAAGGGAGGCAGGCAATGCCCCGTGTGTCTGACCACGTCGAGCTCAGAGAGGCCTCCTATCAACCTGGCCCTAAAGATAGCAGCCGACATGTTTACAAAGCAGAGGACGACCAGGGGAGAGGAGCGCCCAGAGGAGGAGTGGTGTCGTCTTCACAACGAGAAGCTGAAACTGTTCTGTCACAACGATGAGGAGCCCATTTGTGTCGTCTGTCAGCTTTCTAACCAACACAAAGTACATGTGTGTTGCCCTGTAGAGGAGGCTGCTCTGGAGAAAAAGATAGAGGTCTCAGCCAAGCTTGATTCATTGCAGAAACACCTGAAATTACTCAACAAGACTAAAGAGGATTGGGAAGAAACCAAAAATTACTTAAAGAGACAGGCGGACCAGACGGAGCGACAGATGAAGGAGGAGTTTGAGAGGTTCCACCAGTtcttgagggaggaggagaagaacagagtgGCCAAgttgagggaggaagaggagaacaaAACTCAGGTGATGTGTATGAAGTTGGAGTACATCAAGGAGAGGATCGCTGCCCTCACAGACACCATCAGCCAAGTAGAGAAGTCTATACGAGCGGATGATGTGAAGTTTTTACAGGACTACAAGAAGACAAAGAGAAGGTATGTGAAGGGCTACTACTAACTATTac

Function

NR:

description
PREDICTED: zinc-binding protein A33-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036968934.1 True 1180 mRNA 0.44 4 3813375 3818776

Neighbor

gene id symbol gene type direction distance location
LOC110521165 fintrim coding upstream 16976 3784498 ~ 3796399 (+)
ddb2 ddb2 coding upstream 86775 3688608 ~ 3726600 (+)
tle3a LOC104946490 coding upstream 248130 3466296 ~ 3565245 (+)
LOC110521158 LOC106584817 coding upstream 488341 3276441 ~ 3325034 (+)
LOC118945764 NA coding upstream 542124 3270517 ~ 3271251 (+)
LOC110521164 LOC106584811 coding downstream 8858 3827634 ~ 3831299 (+)
LOC118945778 NA coding downstream 76376 3895152 ~ 3896777 (+)
LOC110521161 LOC106584807 coding downstream 112430 3931206 ~ 3937155 (+)
LOC110520937 tmem80 coding downstream 139457 3958233 ~ 4072671 (+)
LOC110521167 eps8l2 coding downstream 261263 4080039 ~ 4175391 (+)
G2192366 NA non-coding upstream 11696 3798411 ~ 3801679 (+)
G2192356 NA non-coding upstream 65801 3746226 ~ 3747574 (+)
G2192295 NA non-coding upstream 275923 3537156 ~ 3537452 (+)
G2192294 NA non-coding upstream 277401 3535159 ~ 3535974 (+)
G2192396 NA non-coding downstream 16872 3835648 ~ 3839595 (+)
G2192404 NA non-coding downstream 39135 3857911 ~ 3858172 (+)
G2192406 NA non-coding downstream 41037 3859813 ~ 3860648 (+)
G2192407 NA non-coding downstream 42237 3861013 ~ 3862390 (+)
G2192410 NA non-coding downstream 57750 3876526 ~ 3878264 (+)
iqch LOC106584827 other upstream 760923 2941093 ~ 3052608 (+)
G2192059 NA other upstream 888910 2922901 ~ 2924465 (+)
smad3b LOC107755098 other upstream 904193 2892934 ~ 2915974 (+)
G2191994 NA other upstream 1050403 2760260 ~ 2762972 (+)
G2192425 LOC106584810 other downstream 91328 3910104 ~ 3910366 (+)
LOC118945757 LOC106584793 other downstream 747975 4566366 ~ 4698448 (+)
G2193497 NA other downstream 958924 4777700 ~ 4779264 (+)
LOC110521176 LOC106584785 other downstream 1174626 4970661 ~ 4994824 (+)

Expression


Co-expression Network