LOC118945758 (LOC103466506)


Basic Information

Item Value
gene id LOC118945758
gene name LOC103466506
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050570.1
NCBI id CM025857.1
chromosome length 46327593
location 4378293 ~ 4532627 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036968532.1
TCCCAATACTCTTTCAGGACCACTCTTTTACTATACCCGCTGTTTCTTCCCTGAGCGTcaccgagagaaagaaaggagaaagagagagagagggggagagaggctgaCAAACTGACTACAGCTACCTGCTGGAAGGGAACGCACTGACGGGGAGGAGGATCGGATATTGAAACACGCACTCTCAACCGAGCAACAAGACAATACAAACAGCTACAACAAAACCCGCAATTAGAGAagagttgtgtgtgttttccagaCGGCAAAGAGGACTAATAATCATCATTACCATTGACCCAACGCCATCAGAAAACCCAGGAGTGAATATATAGCCATGTATTTGAATAGAGAAGAGAACAATAGCAAAGcaGGCTCCCTGTCCCTCAGTGTGCTCCTGGTGTCTCTAGCAGTCACAGTGTGTACTGTCTGGCTGGTGGCTCTGTGTGGTGTCTGTGGCTGGTGTCAACGCAAGCTGGGGAAGAGGAATAAGCCAGGACTGGAGGCGGCTGGTACTTCAGAGGCGGGTCGTGGGcgaggaggagagaaaaaagcCATCAAGTAGGTCTCTACCTGTAGGTTGCATAGGAACACCTGGGTAGTGGGGCCAATGAATAGCCACAACATGCACTACCTTACCATTCAGTAGGGTTCAGCCCTGAATTCCCCACATGAACACTATGGTAAAACTGGCAGCTGGTAACTGGT

Function

NR:

description
PREDICTED: synaptotagmin-7-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036968532.1 True 702 mRNA 0.50 3 4378293 4532627

Neighbor

gene id symbol gene type direction distance location
LOC110521166 LOC106584798 coding upstream 73059 4303164 ~ 4305234 (+)
LOC110521171 NA coding upstream 134297 4175714 ~ 4243996 (+)
LOC110521168 fadsd5 coding upstream 151263 4213585 ~ 4227030 (+)
LOC110521167 eps8l2 coding upstream 202902 4080039 ~ 4175391 (+)
LOC110520937 tmem80 coding upstream 305622 3958233 ~ 4072671 (+)
LOC118945757 LOC106584793 coding downstream 33739 4566366 ~ 4698448 (+)
LOC118945759 NA coding downstream 37546 4570173 ~ 4570963 (+)
LOC118945760 NA coding downstream 171475 4704102 ~ 4713241 (+)
LOC110522695 LOC106590753 coding downstream 315529 4848156 ~ 4869652 (+)
LOC110521175 NA coding downstream 353991 4886618 ~ 4950815 (+)
G2192607 NA non-coding upstream 33899 4344138 ~ 4344394 (+)
G2192599 NA non-coding upstream 50258 4327539 ~ 4328035 (+)
G2192589 NA non-coding upstream 66701 4310794 ~ 4311592 (+)
G2192576 NA non-coding upstream 90612 4285642 ~ 4287681 (+)
G2192571 NA non-coding upstream 99583 4272249 ~ 4278710 (+)
G2192695 NA non-coding downstream 1685 4534312 ~ 4534809 (+)
G2192718 NA non-coding downstream 55653 4588280 ~ 4588734 (+)
G2192713 NA non-coding downstream 68805 4601432 ~ 4606813 (+)
G2192743 NA non-coding downstream 86443 4619070 ~ 4619650 (+)
G2192744 NA non-coding downstream 87626 4620253 ~ 4620562 (+)
LOC110521161 LOC106584807 other upstream 441194 3931206 ~ 3937155 (+)
G2192425 LOC106584810 other upstream 467927 3910104 ~ 3910366 (+)
LOC110521165 fintrim other upstream 592585 3784498 ~ 3796399 (+)
iqch LOC106584827 other upstream 1325841 2941093 ~ 3052608 (+)
G2192059 NA other upstream 1453828 2922901 ~ 2924465 (+)
G2193497 NA other downstream 245073 4777700 ~ 4779264 (+)
LOC110521176 LOC106584785 other downstream 460775 4970661 ~ 4994824 (+)
G2193611 LOC106584794 other downstream 573431 5106058 ~ 5108156 (+)
G2193620 NA other downstream 590886 5123513 ~ 5124709 (+)

Expression


Co-expression Network