pidd1 (pidd1)


Basic Information

Item Value
gene id pidd1
gene name pidd1
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050570.1
NCBI id CM025857.1
chromosome length 46327593
location 4801210 ~ 4845322 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036968534.1
GCCTCATTGGTCTGGTTGATGACAACAAGCTGTTTGAAAAAACGTGTAGCCAACAAGGAAATAGTGAACCTTGCACTTTATAACAAATCAATCTGGCGTAGACGAGACGCAGTGGTTATCGCCGTGAACAGGAAACATTACTAACACGGACGCTCAAGTCCCAACATGCCCAAGTACAGCAGGAAGCAGGTGTCCCTTGAAGATTGGCCCTTCTAAtccatgagaagaaaaaaatcaatGTGTTTTGGATTTCAATTTAACAccttcacacaaaaaaacaaggtcctctgagagaagaggtgtgagatggagagagagaagaagaagaagagggaatgGAGGAGAAGAAGTGGACAAGAGAAAGCGGAGGGTGAGAATCAAGCCGGTGGGGGAACCATGGAAACGGGACATGATCCTCTTGGTCAGATGAGAAATAAGACTGTCCATAGAATAACACACTTTCCCGTAGATAAGATGACCCACCATCTTGGAGAGGAACTGTCACGTAGGGAAGGACAGACCGAGGGAGAAACTACCCGTGTGTCTGCAGTTAGAAACAAAGAAGAAAGTGGAATTCAAATGGGGACGGAGAAGATGGAGGAAATGAATACAGGACTGATAACAGTTACAGACCGAGATGACGAcgaccctccctccatccctcctgctccctccatctctcctgctccctccatccctcctgctccctccatctctcctctctccatctccaccctctcatccccctctccctccttcctggcTCCTCTCTCCTCGTTCTCTCCAGTTCCgtccctcacccctccccttcccccgTCAGTAGAGCTGTGTGCGGTGCTCACCGACACTAGACTGACTCTGGATGTATACCAGGGCGGGACTGCTGTGCTACAGGTACTATGGGTGTCTGTCCCTGGGCAgctgaggggcctgcagtacctccgACTGGGCTCGGAGGACAGGGGGGCGCTAGAGGGAGCCCTGGAGGTCCTACCGCACCTCACACAGCTACGCTCACTGGCTATTAGAGGACACTGTTTCCACGACGCCCATGGTGACCCCCTCCCCGGCCTtctcacctctcttcctccctctctctcatccctttctctcctcgTCCACCTGGACCTCTCCttcaacctcctctcctccttccctccctgcctcctcaccctccccctcctctccaccctcctcctggGTCACAACCACCTCActgatctccctccctccttcggtCCTCTCCCTGCCCTccgctacctctctctcctggGGAACTGTCTGGCCTCTCTCCCCCCCAGCCTGGGTCAGTTGAAGACACTCCACACCCTGGATGTCTCCTATAACCTCCTGGAGACATTACCTGAGGAGATCGGTGCGCTGGAGGAGCTGGTAAAACTGGAGCTGTCACACAACAGGCTAAAGAGGCTGCCTGAGACCATGGgctgtctcctgtctctcaggGACCTGGTGATCCACAGTAATGACCTGCGTGTTCTccccgtctgtctctgtctggacaAACTGGATAAGTTAAAGATAGACGTAAGGAACAACCCCCTGGGAAGACCCCCtacccctccaccactaccacccacACCTGGCCAGGTGGAGACACGCATTCCAGAGTTACACCTTGGACCGAATCGACACAGGTTCTGTGTGTCGCCTGCTGGTTGTCATGTGTTCCTCCCAGGGGGAGCGGAGCTACTGTTTCCCTCGGGTTGCCTAGCGACGACCACCACGCTGCAGTGGGCGGAGCGTAGGCCAGACAGGAAATGGGTGTGGCTAGAGGAGCATGACTTCCTGCTGAGTCGACCACTGGAACTCCTCCCACACGGGATCTCCTTTTTAAAGccagTGGAGGTGTGTGTACCGTACCACCGGTCCAGGAAAGGGGAGGTGGTTGTGAGGAGGTTTGATGGACAGCAGTGGAGTACACTATCCACTGAAACCAGAAGGGGCAGTATAGGACACAGCAGTCACCCCGGAGGCCGACCTGCCAGGCTGGCCTGCGTCTCAGTGAGACAGTTCTCCTGGTTTGTGGCAGTGGGTCGTCCAGTCAGGGACAGTTGCTCTGTGACACCAGAGGGGGCGCTGCTGGTGTCACGTTCAGACGCAGGCATCAAACTGACCTTCCCCCCAGACTGCACTGTTCAGACCCGCACCATCATTCTACAGGTACTACAGGTGTCTGTCACTGAGGTCCAGACGTTGTGTGGAGACCCTCAGGCCAGAGTcagtcccctcctctgtctctctcaagaCCCCAGCATCCAATTCCTCCAGCCAATCAAGGTGCAGGTCCCGCTGCCAACTGGACTCACTGGTCACACAGTAGACCTGTCCTGTCTCCACCTGCTTCATGGAGACCCCAGCGCCCACACCTGGACAGACATAACCTCACAGGTGTCCCTGTACGTCACACAGCTCTACGCCATCTTCTACATCACTCACTTCTCCTGGTACTGGCTGTGGTACACTACCCAGCGCTGTGTTAGCGGGGTGGTCCGTAGGGTCTACCAGAGACTGAAGCAGTTTCAGGTCCAGTTCCTGGTGCTACAGAGGAGAACAGACCCCAAACAGGTTCTGCTACAGTGCCTGCCTGCTGACAAGGTGGACAACAGAGTACAGTCTCTGTCAGAGCAGTACGATGGCCCACAACCCTCAGACCTCTGTGACCTGTTGGAGGGAGAGCAGTTCTTCGCTGGCTTCGAGAGGGGCCTAGACGTCAGCGCAGatAGACCAGACTGTGCGGAAGGGAGACTGTCGTTTGTGTTCTACTCTCGGTTGAAGAATCTCAAAGAGGTGTACGTTTGTCCAACACAGAAGCAGGAGGGGTCAATCAGGGGTCAGgtgtctTTCTATCGAGGGGAGGTTCCCAGTGACATACCACAGGAAGTGGCCAGGAAAAGGAAAGGACACGACAGCCAATGGCTGGCCACCTTACCACTCAGACTTCCTGGCCTAAACTCAGAGGGTGGTAGTAATGGTATGGACTGGGAGCAGCCTCGGTACCCTCCGCTGAACCTGGGCGACCCAGAGAGTGGGTACCTGACTGAGGCTAACCTGCTGGCCATCTCCCTTCAGATCGGACAGGACTGGAGGTCCATTGGCATCAACCTGGGAATCAGCTACCAGGAGCTGGACCGCATGCAGTACAAATACAGAGACAACCTAGGGGCCGTGGTGTTGGAGATGCTGTTCCACTGGGCCCGGGGTCAgcagcaggaaggtgttgggttGTGTCCCGCTGGAGGTCCAGGCCAGCAGGGTATTGGTGCAGTGCCCAGGTTGATAGATGCCATGGTGGAGAGTGGCAGGAGGGACCTGGCTGAGGAGATTAAAGACATAGTGAGGCTAGGAACCCGGAAGTATAATGAGTCACTGAGGAGGGTGGGCctagaagaggaagagaagaggcctTCAACAGACACAGATCCCTCACCTTCACACTGAACCAACTCACAGAGGGAGTATAGAGAGTCAATGAGGAGAGTGAGGTTACAGGAAGAGACCACCTCATCTTCACACTAAGATTACAGGAAGAGACCACCTCATCTTCACACTGAGGAGAGTGAGATTACAGGAAGAGACCACCTCATCTTCACACTGAGGAGAGTGAGATTACAGGAAGAGACAACCTCATCTTCACACTGAGGAGAGTGAGATTACAGGAAGAGACCACCTCATCTTCACACTGAGGAGAGTGAGATTACAGGAAGAGACAACCTCATCTTCACACTGAGGAGAGTGAGATTACAGGAAGAGACCACCTCATCTTCACACGGAGGAGAGTGAGattagaggaagaggagatgacTGAACTCATCCCTTCATTCTGAAGCAGTAGACTGAACTCATCCCTTCATTCTGAAGCAGTAGACTGAACTCATCCCTTCTTTCTGAAGCAGTAGACTGAACTCATCCCTTCTTTCTGAAGCAGTAGACTGAACTCATCCCTTCTTTCTGAAGCAGTAGACTGAACTCATCCCTTCTTTCTGAAGCAGTAGACTGAACTCATCCCTTCTTTCTGAAGCAGTAGACTGAACTCATCCCTTCTTTCTGAAGCAGTAGACTGAACTCATCCCTTCATTCTGAAGCAGTAGACTGAACTCATCCCTTCATTCTGAAGCAGTAGACTGAACTCATCCCTTCTTTCTGAAGCAGTAGACTGAACTCATCCCTTCTTTCTGAAGCAGTAGACTGAACTCATCCCTTCATGCTGAAGCAGTAGACTGAACTCATCCCTTCATGCTGAAGCAGTAGACTGAACTCATCCCTTCTTTCTGAAGCAGTAGACTGAACTCAGTAAAACACTGGGGTTTGAAGTAACTGTTTCTATGAAATGTGACCTATAATTAATTACGATATGAGTGAAATAGTCTTCCTtctaaattgttttatttaaatgtGTTGAAAAGCAACTTTTCTGTGTTGTAATGACATGGGCGTATATGGTCATTGAAAATAGAACGCTGATTGGAAATAGCACGCTTTTATTTTAACTTTCTGTTTTTAGATACAAGTGTGAGGTAAGGTTTTTAAAGTGTTTTGTCTCCAATTTATGCTCTGGCCACAAATACAACTATAGGAtaag
>XM_036968535.1
GCCTCATTGGTCTGGTTGATGACAACAAGCTGTTTGAAAAAACGTGTAGCCAACAAGGAAATAGTGAACCTTGCACTTTATAACAAATCAATCTGGCGTAGACGAGACGCAGTGGTTATCGCCGTGAACAGGAAACATTACTAACACGGACGCTCAAGTCCCAACATGCCCAAGTACAGCAGGAAGCAGGTGTCCCTTGAAGATTGGCCCTTCTAAtccatgagaagaaaaaaatcaatGTGTTTTGGATTTCAATTTAACAccttcacacaaaaaaacaaggtcctctgagagaagaggtgtgagatggagagagagaagaagaagaagagggaatgGAGGAGAAGAAGTGGACAAGAGAAAGCGGAGGGTGAGAATCAAGCCGGTGGGGGAACCATGGAAACGGGACATGATCCTCTTGGTCAGATGAGAAATAAGACTGTCCATAGAATAACACACTTTCCCGTAGATAAGATGACCCACCATCTTGGAGAGGAACTGTCACGTAGGGAAGGACAGACCGAGGGAGAAACTACCCGTGTGTCTGCAGTTAGAAACAAAGAAGAAAGTGGAATTCAAATGGGGACGGAGAAGATGGAGGAAATGAATACAGGACTGATAACAGTTACAGACCGAGATGACGAcgaccctccctccatccctcctgctccctccatctctcctgctccctccatccctcctgctccctccatctctcctctctccatctccaccctctcatccccctctccctccttcctggcTCCTCTCTCCTCGTTCTCTCCAGTTCCgtccctcacccctccccttcccccgTCAGTAGAGCTGTGTGCGGTGCTCACCGACACTAGACTGACTCTGGATGTATACCAGGGCGGGACTGCTGTGCTACAGGTACTATGGGTGTCTGTCCCTGGGCAgctgaggggcctgcagtacctccgACTGGGCTCGGAGGACAGGGGGGCGCTAGAGGGAGCCCTGGAGGTCCTACCGCACCTCACACAGCTACGCTCACTGGCTATTAGAGGACACTGTTTCCACGACGCCCATGGTGACCCCCTCCCCGGCCTtctcacctctcttcctccctctctctcatccctttctctcctcgTCCACCTGGACCTCTCCttcaacctcctctcctccttccctccctgcctcctcaccctccccctcctctccaccctcctcctggGTCACAACCACCTCActgatctccctccctccttcggtCCTCTCCCTGCCCTccgctacctctctctcctggGGAACTGTCTGGCCTCTCTCCCCCCCAGCCTGGGTCAGTTGAAGACACTCCACACCCTGGATGTCTCCTATAACCTCCTGGAGACATTACCTGAGGAGATCGGTGCGCTGGAGGAGCTGGTAAAACTGGAGCTGTCACACAACAGGCTAAAGAGGCTGCCTGAGACCATGGgctgtctcctgtctctcaggGACCTGGTGATCCACAGTAATGACCTGCGTGTTCTccccgtctgtctctgtctggacaAACTGGATAAGTTAAAGATAGACGTAAGGAACAACCCCCTGGGAAGACCCCCtacccctccaccactaccacccacACCTGGCCAGGTGGAGACACGCATTCCAGAGTTACACCTTGGACCGAATCGACACAGGTTCTGTGTGTCGCCTGCTGGTTGTCATGTGTTCCTCCCAGGGGGAGCGGAGCTACTGTTTCCCTCGGGTTGCCTAGCGACGACCACCACGCTGCAGTGGGCGGAGCGTAGGCCAGACAGGAAATGGGTGTGGCTAGAGGAGCATGACTTCCTGCTGAGTCGACCACTGGAACTCCTCCCACACGGGATCTCCTTTTTAAAGccagTGGAGGTGTGTGTACCGTACCACCGGTCCAGGAAAGGGGAGGTGGTTGTGAGGAGGTTTGATGGACAGCAGTGGAGTACACTATCCACTGAAACCAGAAGGGGCAGTATAGGACACAGCAGTCACCCCGGAGGCCGACCTGCCAGGCTGGCCTGCGTCTCAGTGAGACAGTTCTCCTGGTTTGTGGCAGTGGGTCGTCCAGTCAGGGACAGTTGCTCTGTGACACCAGAGGGGGCGCTGCTGGTGTCACGTTCAGACGCAGGCATCAAACTGACCTTCCCCCCAGACTGCACTGTTCAGACCCGCACCATCATTCTACAGGTACTACAGGTGTCTGTCACTGAGGTCCAGACGTTGTGTGGAGACCCTCAGGCCAGAGTcagtcccctcctctgtctctctcaagaCCCCAGCATCCAATTCCTCCAGCCAATCAAGGTGCAGGTCCCGCTGCCAACTGGACTCACTGGTCACACAGTAGACCTGTCCTGTCTCCACCTGCTTCATGGAGACCCCAGCGCCCACACCTGGACAGACATAACCTCACAGGTGTCCCTGTACGTCACACAGCTCTACGCCATCTTCTACATCACTCACTTCTCCTGGTACTGGCTGTGGTACACTACCCAGCGCTGTGTTAGCGGGGTGGTCCGTAGGGTCTACCAGAGACTGAAGCAGTTTCAGGTCCAGTTCCTGGTGCTACAGAGGAGAACAGACCCCAAACAGGTTCTGCTACAGTGCCTGCCTGCTGACAAGGTGGACAACAGAGTACAGTCTCTGTCAGAGCAGTACGATGGCCCACAACCCTCAGACCTCTGTGACCTGTTGGAGGGAGAGCAGTTCTTCGCTGGCTTCGAGAGGGGCCTAGACGTCAGCGCAGatAGACCAGACTGTGCGGAAGGGAGACTGTCGTTTGTGTTCTACTCTCGGTTGAAGAATCTCAAAGAGGTGTACGTTTGTCCAACACAGAAGCAGGAGGGGTCAATCAGGGGTCAGgtgtctTTCTATCGAGGGGAGGTTCCCAGTGACATACCACAGGAAGTGGCCAGGAAAAGGAAAGGACACGACAGCCAATGGCTGGCCACCTTACCACTCAGACTTCCTGGCCTAAACTCAGAGGGTGGTAGTAATGGTATGGACTGGGAGCAGCCTCGGTACCCTCCGCTGAACCTGGGCGACCCAGAGAGTGGGTACCTGACTGAGGCTAACCTGCTGGCCATCTCCCTTCAGATCGGACAGGACTGGAGGTCCATTGGCATCAACCTGGGAATCAGCTACCAGGAGCTGGACCGCATGCAGTACAAATACAGAGACAACCTAGGGGCCGTGGTGTTGGAGATGCTGTTCCACTGGGCCCGGGGTCAgcagcaggaaggtgttgggttGTGTCCCGCTGGAGGTCCAGGCCAGCAGGGTATTGGTGCAGTGCCCAGGTTGATAGATGCCATGGTGGAGAGTGGCAGGAGGGACCTGGCTGAGGAGATTAAAGACATAGTGAGGCTAGGAACCCGGAAGTATAATGAGTCACTGAGGAGGGTGGGCctagaagaggaagagaagaggcctTCAACAGACACAGATCCCTCACCTTCACACTGAACCAACTCACAGAGGGAGTATAGAGAGTCAATGAGGAGAGTGAGATTACAGGAAGAGACCACCTCATCTTCACACTGAGGAGAGTGAGATTACAGGAAGAGACCACCTCATCTTCACACTGAGGAGAGTGAGATTACAGGAAGAGACAACCTCATCTTCACACTGAGGAGAGTGAGATTACAGGAAGAGACCACCTCATCTTCACACTGAGGAGAGTGAGATTACAGGAAGAGACAACCTCATCTTCACACTGAGGAGAGTGAGATTACAGGAAGAGACCACCTCATCTTCACACGGAGGAGAGTGAGattagaggaagaggagatgacTGAACTCATCCCTTCATTCTGAAGCAGTAGACTGAACTCATCCCTTCATTCTGAAGCAGTAGACTGAACTCATCCCTTCTTTCTGAAGCAGTAGACTGAACTCATCCCTTCTTTCTGAAGCAGTAGACTGAACTCATCCCTTCTTTCTGAAGCAGTAGACTGAACTCATCCCTTCTTTCTGAAGCAGTAGACTGAACTCATCCCTTCTTTCTGAAGCAGTAGACTGAACTCATCCCTTCTTTCTGAAGCAGTAGACTGAACTCATCCCTTCATTCTGAAGCAGTAGACTGAACTCATCCCTTCATTCTGAAGCAGTAGACTGAACTCATCCCTTCTTTCTGAAGCAGTAGACTGAACTCATCCCTTCTTTCTGAAGCAGTAGACTGAACTCATCCCTTCATGCTGAAGCAGTAGACTGAACTCATCCCTTCATGCTGAAGCAGTAGACTGAACTCATCCCTTCTTTCTGAAGCAGTAGACTGAACTCAGTAAAACACTGGGGTTTGAAGTAACTGTTTCTATGAAATGTGACCTATAATTAATTACGATATGAGTGAAATAGTCTTCCTtctaaattgttttatttaaatgtGTTGAAAAGCAACTTTTCTGTGTTGTAATGACATGGGCGTATATGGTCATTGAAAATAGAACGCTGATTGGAAATAGCACGCTTTTATTTTAACTTTCTGTTTTTAGATACAAGTGTGAGGTAAGGTTTTTAAAGTGTTTTGTCTCCAATTTATGCTCTGGCCACAAATACAACTATAGGAtaag

Function

symbol description
pidd1 Predicted to act upstream of or within apoptotic process; cellular response to DNA damage stimulus; and signal transduction. Orthologous to human PIDD1 (p53-induced death domain protein 1).

NR:

description
p53-induced death domain-containing protein 1

GO: NA

KEGG:

id description
K10130 LRDD, PIDD; leucine-rich repeats and death domain-containing protein

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036968534.1 False 4600 mRNA 0.52 16 4801210 4845322
XM_036968535.1 True 4565 mRNA 0.52 17 4801210 4845322

Neighbor

gene id symbol gene type direction distance location
LOC110521172 LOC106584780 coding downstream 10961 4735169 ~ 4790249 (-)
LOC118945761 NA coding downstream 82556 4717985 ~ 4718654 (-)
fads2 d6fad_b coding downstream 537928 4238239 ~ 4263282 (-)
LOC110522693 d6fadc coding downstream 601913 4175699 ~ 4199297 (-)
LOC110515904 myrf coding downstream 741470 3949459 ~ 4059740 (-)
epx LOC106584777 coding upstream 193895 5039217 ~ 5067190 (-)
hps5 hps5 coding upstream 226626 5071948 ~ 5122084 (-)
gtf2h1 LOC106584761 coding upstream 278179 5123501 ~ 5144889 (-)
muc2.1 LOC106593352 coding upstream 305298 5150620 ~ 5187550 (-)
kcnc1b LOC106584763 coding upstream 498618 5343940 ~ 5415904 (-)
G2193814 NA non-coding downstream 551 4797732 ~ 4800659 (-)
G2193850 NA non-coding downstream 5763 4793377 ~ 4795447 (-)
G2193841 NA non-coding downstream 34332 4766479 ~ 4766878 (-)
G2193826 NA non-coding downstream 42591 4758195 ~ 4758619 (-)
G2193823 NA non-coding downstream 46350 4753300 ~ 4754860 (-)
G2193865 NA non-coding upstream 9293 4854615 ~ 4854947 (-)
G2193868 NA non-coding upstream 11521 4856843 ~ 4857087 (-)
G2193889 NA non-coding upstream 73292 4918614 ~ 4918913 (-)
G2193901 NA non-coding upstream 102682 4948004 ~ 4950826 (-)
G2193904 NA non-coding upstream 109415 4954737 ~ 4954939 (-)
G2193810 NA other downstream 68349 4731727 ~ 4732861 (-)
G2193451 NA other downstream 116244 4681737 ~ 4684966 (-)
G2193421 NA other downstream 189743 4610762 ~ 4611467 (-)
G2193227 fd6d other downstream 538011 4190064 ~ 4263199 (-)
LOC110521194 svip other upstream 985979 5825537 ~ 5836399 (-)
LOC110522707 myo5c other upstream 1363540 6206342 ~ 6221642 (-)
G2194918 NA other upstream 1381024 6226346 ~ 6294511 (-)
G2195405 NA other upstream 1790008 6635330 ~ 6635951 (-)
G2195750 NA other upstream 2401412 7225447 ~ 7270413 (-)

Expression


Co-expression Network