kcnc1b (LOC106584763)


Basic Information

Item Value
gene id kcnc1b
gene name LOC106584763
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050570.1
NCBI id CM025857.1
chromosome length 46327593
location 5343940 ~ 5415904 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036968853.1
GCTGGCAAATAACGCAAACAAATCAGTGAACGCATGAACTCCATGACTGACAGTTAAAACAGAACAATGGTTATGACTTGGCATGCTCCGTGTCATTTGAGACGAGGTGAaactagggagagagggaaccagCTGTCAACAATGATTTATTGTTAGCTTATATTTtcggtgttttttttttttttaaatttttttttagacATATGGTGAGTCTCTAGTCTGACAGTCCTACTccctcgtcttcctcctcctcttcttcctctacggTGTTTCCAGAACCAACGTTGTTCTGAGTTCGTGACAATTCTAAAGAGAATCCTTACCCACCGCGAGCACACAAATACAGAGAACATAGGACGTGCGCGTGCCTTCTTGCCTTCCGTCGTTTATCTTCTTGAGACTTCACACCCGTGAACACGGTTGACTGCTCGCCCTCCTGCAGGCTCTAAGCACGAGGGAATCACTCGCATCGGTCCGTCAAAATGCATACACGAAAACAACAATTACCGGCTGAAGATTAACATACAGACACCTGCGTGAGAATAAAAGGCGCGGCGCCTGATCTTTACAGTTATCGGTTTCGTTCAACGGAAAACTGGATTTTTCTGTGTTCTTTAGGGGAGGGGGTAAGCGACAGTAGATACATGAGAGGAAGGGTAGCAGTCTGAATAGCAAGGAGGGTGTCtcggagaggagggagagagagagactggtgctGTCCTTTCAGAACCACGGAAAGCAGTCACCCTTGGCACAGCAGTCACCCTTGGCACAGCAGTCACCTCACTGCCCGTGGATGTCATAAACAGGTTCTACCAAAACCACCACAACAGGAGGAGAGTCATTGTGTTGGATTTGGataaaaagaaaaacaaaacaattatagCATCATCTTTATCTCTCGGATGTATACCACTACGAGGTGACGTCCATTGTTTATGGGAAGCCATTGACTACAATCATTTGTGCAATTATGTGTTCTCCCTCCAGTAGGTCTGGTTGGTGATTGATTTCCGTGACAGGTTGGAGAACCGTTGGAGCATCTGGCATTATCAGTGGGAATATGTGCTAAATTAGGTCTATACGTGTATTCTTTGAGGGTCTGTAGtctgtaatagcagcagcagatTTATTTTGTGCATTGCTCTATTTCCTATAGcatcctaccccccccccccccccctcccctcccctggtaATCCCGGGTGTGCATGTGTTGCATTTGCGagagttctccctccctccctccctcccgttgaGGCGTGCGGTGCTCCTAGAGTTGCCGTTGTGATGCCGGGAACTTACTGGAGACATGCCTAAGGGACGCAATGGGCTTGAGCGACGAGAAGGATCGCATTGTGATAAATGTGGGAGGTATCAAACATCAGACATATCGCGGTACCCTGCGTACCCTGCCCGGCACCCGCTTATCCTGGCTCGCCGAACCCGACGCGCCTAGCCACTTTGACTGGGATGACAAACATGAGGAATTCTTCTTCGACCGCCACCCGGGTGTTTTCGCCCATATCCTTAATTATTACCGGACAGGTAAACTGCACTGCCCTGCCGATGTCTGCGGACCACTGTACGAGGAGGAACTGGCCTTCTGGGGCATCGACGAGACGGACGTGGAACCGTGCTGCTGGATGACCTATAGCCAGCATCGGGAGGCGGAAGAGGCACTTGATAGTTTTGGCGGGGGGGCCCTGCTCGACCTGACTGGTAACGATGATCCAGACCCGGAGATTGCAGCCGACCAGGGGGACGGGGTTGGTGATGAGGCTGATGAGATGACAAGGAGGCTGGCACAGGGGGATTCTCCAGATGCCAAGGCAGGGGGGGTTTGGGGCCGCTGGCAGAAACGCATGTGGGCACTGTTTGAAGACCCCTACTCCTCTAAATATGCACGGTGGATAGCCCTGGCCTCTCTGTTCTTCATCCTCGTGTCCATCTCCACCTTCTGCCTGGAGACCCACGAGTTCTTCAACCCCATCGTGAACCGCACCGAGCTGGAGCTGGTGGACAACGTAACGGTGGAGCATGTGTACCAGGAGACGGAGACGGTGGTCTATCTCACCTACATCGAGGGCGTCTGCGTGGTCTGGTTTACCTTTGAGTTCATGATGCGAGTCATATTCTGTCCGGATAAGATGGAGTTCATGAAGAAAGCTCTCAACGTTATCGACTTCGTGGCTATCTTACCGTTCTACCTGGAGGTCGGGCTGAGCGGGCTGTCTTCTAAAGCGGCTAAGGATGTTCTGGGGTTCCTGAGGGTGGTGAGGTTCGTCAGGATCCTGCGTATCTTCAAGCTGACCCGTCACTTCGTGGGCCTGAGGGTTCTGGGTCACACGTTACGGGCTAGCACCAATGAGTTCCTCCTCCTCATTATCTTCCTCGCCCTCGGAGTCCTCATCTTCGCCACGATGATCTACTACGCCGAACGGATGGGAGCGGACCCGACCGACCCGCGCGCCAGCGATCACACGCACTTCAAGAACATCCCCATCGGATTCTGGTGGGCCGTCGTTACCATGACGACCCTTGGCTACGGCGACATGTACCCCCAGACGTGGTCTGGCATGCTTGTCGGCGCGCTGTGCGCCCTATCGGGTGTACTGACCATCGCCATGCCCGTCCCCGTGATCGTCAACAACTTTGGAATGTATTACTCCCTGGCCATGGCGAAGCAGAAGCTACCAAAGAAGAAGAACAAGCATATCCCGCGAGCACCCCAACCAGGATCACCCAACTACTGTAAGTCCAGCATCAACTCTCCTCCAACGCCCCATAAAGCACCGCTCCTTCCTGAAAGCCCGAACTTAGTCCACCCCGTTTTGGCTCTGGCTCAAAACATGGCTCTGACACACGACGACGTCTTTGAAGTACAGTTTCCAGaTTCCAAGCTGAATGGGGAGGCGGCCAACGCAGCTCTAGCCAATGAGGACTGTCCTCATATAGACCAGGCCATCTCGCCAGAGGAGATCTTCAGCCCCAGTGAGAGAGAACGGCCTTGTTGTCTTGTCACCACAGCTGCAGAACGACCCAACCACACAGGGGGTAGAGTCAGGAGGGAGACCACCCAGCGACAGCCTCGGAGCAGACCAGCAGCATCAGACTCAGTTTGTGTAATGAACCATGGTGTTCCCACCACGATATGTCTGTCCCATAATAAGACCCCCTCACCGCAACACCAGCCCCCCATCTGATAATACAGTAGCCTTGTTTGTTGTGTGTATAAAATTTGCAGTTTTTAAACAAATGGGTGTTACACTGGCACCtcattccctatgtagggcactacttttgaacaggattATTCCCACCTACTGTGTGCAAGCCCtcggtcaaaagcagtgcactacatagggaatagggtgccatttggttttAAGACGCATCCTAACTCAGCATCGGTGTAGCACAGAGGGAGTGTTGTTGTCAAGCCTCATGTAGCTCAGTATCTGTGACTGGTTATTGTgctgtaatgtgctgtaatgCTCTGTGCCTATTGTTTggtgtgtatgtgcctgtgtaTACACTTTTGTGTGCAGAAGGTGTGTACTACTGCTAGTACTCTCAAAGGTTTTTGGGAGTGATTATCAAATATTTGTGTGCTGCTTCTGTGCTGcttc
>XM_036968852.1
GCTGGCAAATAACGCAAACAAATCAGTGAACGCATGAACTCCATGACTGACAGTTAAAACAGAACAATGGTTATGACTTGGCATGCTCCGTGTCATTTGAGACGAGGTGAaactagggagagagggaaccagCTGTCAACAATGATTTATTGTTAGCTTATATTTtcggtgttttttttttttttaaatttttttttagacATATGGTGAGTCTCTAGTCTGACAGTCCTACTccctcgtcttcctcctcctcttcttcctctacggTGTTTCCAGAACCAACGTTGTTCTGAGTTCGTGACAATTCTAAAGAGAATCCTTACCCACCGCGAGCACACAAATACAGAGAACATAGGACGTGCGCGTGCCTTCTTGCCTTCCGTCGTTTATCTTCTTGAGACTTCACACCCGTGAACACGGTTGACTGCTCGCCCTCCTGCAGGCTCTAAGCACGAGGGAATCACTCGCATCGGTCCGTCAAAATGCATACACGAAAACAACAATTACCGGCTGAAGATTAACATACAGACACCTGCGTGAGAATAAAAGGCGCGGCGCCTGATCTTTACAGTTATCGGTTTCGTTCAACGGAAAACTGGATTTTTCTGTGTTCTTTAGGGGAGGGGGTAAGCGACAGTAGATACATGAGAGGAAGGGTAGCAGTCTGAATAGCAAGGAGGGTGTCtcggagaggagggagagagagagactggtgctGTCCTTTCAGAACCACGGAAAGCAGTCACCCTTGGCACAGCAGTCACCCTTGGCACAGCAGTCACCTCACTGCCCGTGGATGTCATAAACAGGTTCTACCAAAACCACCACAACAGGAGGAGAGTCATTGTGTTGGATTTGGataaaaagaaaaacaaaacaattatagCATCATCTTTATCTCTCGGATGTATACCACTACGAGGTGACGTCCATTGTTTATGGGAAGCCATTGACTACAATCATTTGTGCAATTATGTGTTCTCCCTCCAGTAGGTCTGGTTGGTGATTGATTTCCGTGACAGGTTGGAGAACCGTTGGAGCATCTGGCATTATCAGTGGGAATATGTGCTAAATTAGGTCTATACGTGTATTCTTTGAGGGTCTGTAGtctgtaatagcagcagcagatTTATTTTGTGCATTGCTCTATTTCCTATAGcatcctaccccccccccccccccctcccctcccctggtaATCCCGGGTGTGCATGTGTTGCATTTGCGagagttctccctccctccctccctcccgttgaGGCGTGCGGTGCTCCTAGAGTTGCCGTTGTGATGCCGGGAACTTACTGGAGACATGCCTAAGGGACGCAATGGGCTTGAGCGACGAGAAGGATCGCATTGTGATAAATGTGGGAGGTATCAAACATCAGACATATCGCGGTACCCTGCGTACCCTGCCCGGCACCCGCTTATCCTGGCTCGCCGAACCCGACGCGCCTAGCCACTTTGACTGGGATGACAAACATGAGGAATTCTTCTTCGACCGCCACCCGGGTGTTTTCGCCCATATCCTTAATTATTACCGGACAGGTAAACTGCACTGCCCTGCCGATGTCTGCGGACCACTGTACGAGGAGGAACTGGCCTTCTGGGGCATCGACGAGACGGACGTGGAACCGTGCTGCTGGATGACCTATAGCCAGCATCGGGAGGCGGAAGAGGCACTTGATAGTTTTGGCGGGGGGGCCCTGCTCGACCTGACTGGTAACGATGATCCAGACCCGGAGATTGCAGCCGACCAGGGGGACGGGGTTGGTGATGAGGCTGATGAGATGACAAGGAGGCTGGCACAGGGGGATTCTCCAGATGCCAAGGCAGGGGGGGTTTGGGGCCGCTGGCAGAAACGCATGTGGGCACTGTTTGAAGACCCCTACTCCTCTAAATATGCACGGTGGATAGCCCTGGCCTCTCTGTTCTTCATCCTCGTGTCCATCTCCACCTTCTGCCTGGAGACCCACGAGTTCTTCAACCCCATCGTGAACCGCACCGAGCTGGAGCTGGTGGACAACGTAACGGTGGAGCATGTGTACCAGGAGACGGAGACGGTGGTCTATCTCACCTACATCGAGGGCGTCTGCGTGGTCTGGTTTACCTTTGAGTTCATGATGCGAGTCATATTCTGTCCGGATAAGATGGAGTTCATGAAGAAAGCTCTCAACGTTATCGACTTCGTGGCTATCTTACCGTTCTACCTGGAGGTCGGGCTGAGCGGGCTGTCTTCTAAAGCGGCTAAGGATGTTCTGGGGTTCCTGAGGGTGGTGAGGTTCGTCAGGATCCTGCGTATCTTCAAGCTGACCCGTCACTTCGTGGGCCTGAGGGTTCTGGGTCACACGTTACGGGCTAGCACCAATGAGTTCCTCCTCCTCATTATCTTCCTCGCCCTCGGAGTCCTCATCTTCGCCACGATGATCTACTACGCCGAACGGATGGGAGCGGACCCGACCGACCCGCGCGCCAGCGATCACACGCACTTCAAGAACATCCCCATCGGATTCTGGTGGGCCGTCGTTACCATGACGACCCTTGGCTACGGCGACATGTACCCCCAGACGTGGTCTGGCATGCTTGTCGGCGCGCTGTGCGCCCTATCGGGTGTACTGACCATCGCCATGCCCGTCCCCGTGATCGTCAACAACTTTGGAATGTATTACTCCCTGGCCATGGCGAAGCAGAAGCTACCAAAGAAGAAGAACAAGCATATCCCGCGAGCACCCCAACCAGGATCACCCAACTACTGTAAGTCCAGCATCAACTCTCCTCCAACGCCCCATAAAGCACCGCTCCTTCCTGAAAGCCCGAACTTAGTCCACCCCGTTTTGGCTCTGGCTCAAAACATGGCTCTGACACACGACGACGTCTTTGAAGTACAGTTTCCAGaTTCCAAGCTGAATGGGGAGGCGGCCAACGCAGCTCTAGCCAATGAGGACTGTCCTCATATAGACCAGGCCATCTCGCCAGAGGAGATCTTCAGCCCCAGTGAGAGAGAACGGCCTTGTTGTCTTGTCACCACAGCTGCAGAACGACCCAACCACACAGGGGGTAGAGTCAGGAGGGGTTATGACAAGCCTTGGAGCGCCCTAAACAGCATGTCTGGCATGAGCGTGAGTGGCCTGGGCGGCCATGACACCTCTGGAGTGTCGTCCTCCTGCGTTGCCGCGCTACCCTGCAGTCCATCCTGTCTCATCCAGCACTcccactcccccatcccatccATTCTCTGAACTCTAGCATGGTTCACCAGGACACTTTGGCCCTGTCCAGAATCAACCCCTAACGGTAGCCCCGGACAACCCACTagacacttgtggagatctgagaggattggataggTGTAGGCAATATGGTGATAGCGCcacctagcctatcagagggcaaggtGGAGTTGTCACCATATTTTATTGCGTAGTTACACctctccaatcctctcagatctctaggggttgtttctggacacaTCCTATCACTATGTGACCTgacctctctctacttctctctcctctctctacttctctctcctctctctactgctatctcctctctctacttctctctcctctctctactgctctcccctctctctactgctctcccccctctctact

Function

NR:

description
potassium voltage-gated channel subfamily C member 1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036968853.1 False 3632 mRNA 0.52 4 5343940 5415904
XM_036968852.1 True 3620 mRNA 0.53 4 5351122 5415904

Neighbor

gene id symbol gene type direction distance location
muc2.1 LOC106593352 coding downstream 156390 5150620 ~ 5187550 (-)
gtf2h1 LOC106584761 coding downstream 199051 5123501 ~ 5144889 (-)
hps5 hps5 coding downstream 221856 5071948 ~ 5122084 (-)
epx LOC106584777 coding downstream 276750 5039217 ~ 5067190 (-)
pidd1 pidd1 coding downstream 498618 4801210 ~ 4845322 (-)
LOC110521187 LOC106584768 coding upstream 142477 5557683 ~ 5599839 (-)
fancf fancf coding upstream 346936 5762840 ~ 5764816 (-)
LOC110521193 NA coding upstream 399834 5815738 ~ 5818923 (-)
LOC118945919 NA coding upstream 401151 5817055 ~ 5817143 (-)
LOC118945916 NA coding upstream 401578 5817482 ~ 5817551 (-)
G2194018 NA non-coding downstream 866 5340860 ~ 5343074 (-)
G2194060 NA non-coding downstream 4251 5339464 ~ 5339689 (-)
G2194051 NA non-coding downstream 26008 5317579 ~ 5317932 (-)
G2194050 NA non-coding downstream 26400 5315780 ~ 5317540 (-)
G2194049 NA non-coding downstream 28190 5315513 ~ 5315750 (-)
G2194104 NA non-coding upstream 38992 5454896 ~ 5504666 (-)
G2194118 NA non-coding upstream 71798 5487702 ~ 5488624 (-)
G2194119 NA non-coding upstream 75334 5491238 ~ 5495277 (-)
G2194124 NA non-coding upstream 85544 5501448 ~ 5502158 (-)
G2194123 NA non-coding upstream 112346 5528250 ~ 5543551 (-)
G2193850 NA other downstream 549717 4793377 ~ 4795447 (-)
G2193810 NA other downstream 611079 4731727 ~ 4732861 (-)
G2193451 NA other downstream 658974 4681737 ~ 4684966 (-)
G2193421 NA other downstream 732473 4610762 ~ 4611467 (-)
G2193227 fd6d other downstream 1080741 4190064 ~ 4263199 (-)
LOC110521194 svip other upstream 415397 5825537 ~ 5836399 (-)
LOC110522707 myo5c other upstream 792958 6206342 ~ 6221642 (-)
G2194918 NA other upstream 810442 6226346 ~ 6294511 (-)
G2195405 NA other upstream 1219426 6635330 ~ 6635951 (-)
G2195750 NA other upstream 1830830 7225447 ~ 7270413 (-)

Expression


Co-expression Network