Item | Value |
---|---|
gene id | LOC110521188 |
gene name | ano5 |
gene type | coding |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_050570.1 |
NCBI id | CM025857.1 |
chromosome length | 46327593 |
location | 5621165 ~ 5699784 (+) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
symbol | description |
---|---|
ano5 | Enables intracellular calcium activated chloride channel activity. Involved in chloride transport. Located in plasma membrane. Implicated in Miyoshi muscular dystrophy 3; autosomal recessive limb-girdle muscular dystrophy type 2L; gnathodiaphyseal dysplasia; and isolated elevated serum creatine phosphokinase levels. |
description |
---|
PREDICTED: anoctamin-5 isoform X4 |
id | description |
---|---|
K19480 | ANO5, GDD1, TMEM16E; anoctamin-5 |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XM_036969468.1 | False | 2902 | mRNA | 0.53 | 22 | 5621165 | 5692537 |
XM_036969464.1 | False | 7001 | mRNA | 0.45 | 24 | 5621168 | 5699784 |
XM_036969466.1 | False | 6959 | mRNA | 0.45 | 23 | 5621168 | 5699784 |
XM_036969465.1 | False | 6994 | mRNA | 0.45 | 24 | 5621169 | 5699784 |
XM_036969467.1 | True | 6714 | mRNA | 0.44 | 22 | 5621170 | 5699784 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC118945765 | NA | coding | upstream | 16302 | 5604084 ~ 5604863 (+) |
LOC110522700 | LOC106584766 | coding | upstream | 91264 | 5473255 ~ 5529901 (+) |
LOC110521185 | LOC106584765 | coding | upstream | 168122 | 5430549 ~ 5453043 (+) |
LOC118945903 | NA | coding | upstream | 311611 | 5309375 ~ 5309554 (+) |
tph1a | LOC106584760 | coding | upstream | 312910 | 5298056 ~ 5308255 (+) |
LOC110521189 | slc17a6 | coding | downstream | 9495 | 5709279 ~ 5734378 (+) |
LOC110522702 | LOC106561804 | coding | downstream | 65061 | 5764845 ~ 5812599 (+) |
LOC110522704 | ano3 | coding | downstream | 204218 | 5904002 ~ 5993318 (+) |
LOC110521197 | LOC106584705 | coding | downstream | 323028 | 6022812 ~ 6032411 (+) |
LOC110521199 | LOC106584748 | coding | downstream | 336742 | 6036526 ~ 6052246 (+) |
G2194183 | NA | non-coding | upstream | 4615 | 5616330 ~ 5616550 (+) |
G2194182 | NA | non-coding | upstream | 6069 | 5614764 ~ 5615096 (+) |
G2194181 | NA | non-coding | upstream | 7119 | 5613804 ~ 5614046 (+) |
G2194177 | NA | non-coding | upstream | 9980 | 5610636 ~ 5611185 (+) |
G2193809 | NA | non-coding | upstream | 11108 | 5609588 ~ 5610057 (+) |
G2194220 | NA | non-coding | downstream | 6796 | 5706580 ~ 5707014 (+) |
G2194221 | NA | non-coding | downstream | 7821 | 5707605 ~ 5707819 (+) |
G2194235 | NA | non-coding | downstream | 38993 | 5738777 ~ 5741985 (+) |
G2194249 | NA | non-coding | downstream | 78549 | 5778333 ~ 5778591 (+) |
G2194251 | NA | non-coding | downstream | 80764 | 5780548 ~ 5780782 (+) |
G2193690 | NA | other | upstream | 304551 | 5315780 ~ 5316614 (+) |
G2193655 | NA | other | upstream | 420796 | 5198526 ~ 5200369 (+) |
G2193620 | NA | other | upstream | 496456 | 5123513 ~ 5124709 (+) |
G2193611 | LOC106584794 | other | upstream | 513009 | 5106058 ~ 5108156 (+) |
G2194273 | NA | other | downstream | 130203 | 5829987 ~ 5832151 (+) |
LOC118945766 | NA | other | downstream | 803853 | 6503537 ~ 6506780 (+) |
LOC110521224 | LOC106613263 | other | downstream | 1199664 | 6899321 ~ 6916450 (+) |
LOC110521231 | LOC106584712 | other | downstream | 1336331 | 7036115 ~ 7102552 (+) |
G2195715 | NA | other | downstream | 1505596 | 7205380 ~ 7205867 (+) |