Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC101268961 |
| gene name | LOC101268961 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_050570.1 |
| NCBI id | CM025857.1 |
| chromosome length | 46327593 |
| location | 8519320 ~ 8526505 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| id | name | namespace |
|---|---|---|
| GO:0045454 | cell redox homeostasis | biological_process |
| GO:0006662 | glycerol ether metabolic process | biological_process |
| GO:0055114 | oxidation-reduction process | biological_process |
| GO:0005783 | endoplasmic reticulum | cellular_component |
| GO:0015035 | protein disulfide oxidoreductase activity | molecular_function |
| GO:0016853 | isomerase activity | molecular_function |
| id | description |
|---|---|
| K08056 | PDIA3, GRP58; protein disulfide-isomerase A3 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| NM_001281398.1 | True | 1479 | mRNA | 0.53 | 13 | 8519320 | 8526505 |
8,518,000
8,519,000
8,520,000
8,521,000
8,522,000
8,523,000
8,524,000
8,525,000
8,526,000
8,527,000
8,527,000
8,528,000
8,529,000
8,530,000
8,531,000
8,532,000
8,533,000
8,534,000
8,535,000
8,536,000
NC_050570.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| isg20 | LOC106584653 | coding | downstream | 5092 | 8509548 ~ 8514228 (-) |
| LOC110521248 | LOC106584650 | coding | downstream | 15872 | 8494835 ~ 8503448 (-) |
| LOC110521247 | LOC106584649 | coding | downstream | 26739 | 8452318 ~ 8492581 (-) |
| LOC110521246 | LOC106584647 | coding | downstream | 72485 | 8435197 ~ 8446835 (-) |
| LOC110522722 | LOC106584645 | coding | downstream | 140683 | 8287806 ~ 8378637 (-) |
| LOC110521250 | LOC106584654 | coding | upstream | 13695 | 8540200 ~ 8551523 (-) |
| LOC110522723 | ticrr | coding | upstream | 28391 | 8554896 ~ 8573839 (-) |
| LOC110521252 | LOC106584657 | coding | upstream | 54004 | 8580509 ~ 8587172 (-) |
| LOC110521253 | LOC106584658 | coding | upstream | 66763 | 8593268 ~ 8595577 (-) |
| LOC110521254 | hsd17b12 | coding | upstream | 136928 | 8663433 ~ 8698074 (-) |
| G2196906 | NA | non-coding | downstream | 106343 | 8412634 ~ 8412977 (-) |
| G2196835 | NA | non-coding | downstream | 210197 | 8308382 ~ 8309123 (-) |
| G2196824 | NA | non-coding | downstream | 234928 | 8284173 ~ 8284392 (-) |
| G2196821 | NA | non-coding | downstream | 237848 | 8281259 ~ 8281472 (-) |
| G2197045 | NA | non-coding | upstream | 61249 | 8587754 ~ 8592010 (-) |
| G2197247 | NA | non-coding | upstream | 172035 | 8698540 ~ 8744360 (-) |
| G2197300 | NA | non-coding | upstream | 178437 | 8704942 ~ 8705545 (-) |
| G2197301 | NA | non-coding | upstream | 180712 | 8707217 ~ 8707448 (-) |
| G2197304 | NA | non-coding | upstream | 197384 | 8723889 ~ 8724271 (-) |
| G2196747 | NA | other | downstream | 381210 | 8126403 ~ 8138110 (-) |
| G2196733 | LOC106596922 | other | downstream | 412267 | 8099671 ~ 8107053 (-) |
| G2196731 | LOC106584678 | other | downstream | 425324 | 8092701 ~ 8093996 (-) |
| G2195796 | NA | other | downstream | 1233649 | 7285193 ~ 7285671 (-) |
| G2195750 | NA | other | downstream | 1248907 | 7225447 ~ 7270413 (-) |
| LOC110521266 | LOC106584677 | other | upstream | 504472 | 9030457 ~ 9031665 (-) |
| LOC110522725 | LOC106584670 | other | upstream | 593102 | 9119598 ~ 9125424 (-) |
| G2199158 | NA | other | upstream | 1470220 | 9996725 ~ 9997155 (-) |
