LOC110522735 (LOC106584602)


Basic Information

Item Value
gene id LOC110522735
gene name LOC106584602
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050570.1
NCBI id CM025857.1
chromosome length 46327593
location 11188626 ~ 11196163 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036968574.1
ATGTCAGATTACTCCATCTCTATTGCTGAGGAGGTTAAGATTCAGGACCCTGAAAAGAATCAACCAGCAAAGCTCAAAGatTCCTCCATCTTCTTGGCTGGTGCTGAGGTCAAACAGACCCAGTGCAAAGATGTCTCCTTGGTTGCTGCAGCTGAGTCAAAGACTCTGAAACCTCAGGAGGAGCAGCCAGCAAAGTGTAAAGATTTGTCTGTGTTTGCTGCAGCCGGAGGAAAGACTCAGGACTCAGCAAATGTCAAAGGTGAAAAGGACCTGGACATTAATGTAGACTGGCCAGAGACTGACTACAGTTGCAGTGACGATGAGTTCATGAGTGAAGAGATATACCCAACGGATGAAGAGAAAGATCTTCCACAACTCCAGACAGATGGGAATACTAATGAGATTGGTGGAGAAACGACAGATAGTGTTGCTTTTCAAAGACACAGAATAAACTCAGAGAAGGATGAGAAAGATGGAGATGAAAAGAAAGAGGTCATTCAGGAGAACCAGAGAACAACGTACAAAGATTTATCCATACTTTCAGCTGGTGCTCAGGTCACACATTCACAGTGCAAAGATCTCTCTGGGTTTGTTGCAGCAAGGGATAAGGTCAAGGGTGAAAACGACCGGGACATAGACTGGTTAGAGAGTGACAACAGTGAGATTGAGGAAGTAATAGAAAGTGACAGTGAAGTAAAGGAAAttcaccaaatggaagaaaagaaagagaaggatgaaGAACAGACAGATGACCTCCAAAgtaagagaaagacagagaagagTGACGAGGAAACCACAGATAGCAGTGATGACAAGAGTGAGAAAACAAACATCAAGAAAGACAAAGAGATGCGTCATGAAGACATTACAGACCACACCCTTGAGAAAACAGATTTCTCCATCTTAGCTGAGGAGGAGGTTAAGACTCAGGACCCTCGCGCGGACCAGCCAGCAAAGTGCAAAGCTGGAGGACAGACTCAGAacactcagacagaccaggcagcAAAGGTCAAAGGTGAACAGGACCTGGACATTGACTGGTCAGAGAGTGACTATGACAGTGAGGGAACAATGGATAGTGACAATGAGTTCATAGGTAAAGACGAATGGACAAAGTGGAGCGTGGACATTGAGGAAAAGAAAGTGTGTACACAAGTCCAACATGATGCAAATACAGCTGAGAGAGACATCATAAACCAAGAGAAGAAAAAGGACGAGCCAGCAAAATgcaaagATTTATCCATCTTTTCAGCTGGTGCTCAGACTCAGCAGACCCAGCAGTGCAAAGATGTCTCCATGGTTACTGCAACTGAGTCAAAGACTCTGAAACCTCAGGAGGACCAGCCAGCAGTGTGCAAAGCTGGAGGAAagactcagacagaccaggcaacAAAGGTCAAAGGTGAACAGGACCTGGACATCGACACAGACTGGTCAGAGAGTGactatgatagtgatgatgaatTCATAACTGAAGAAGTATGGCAAAAGTGGAAAGAGGACAATGAgaagaaaagacaaaacaaagattACACAGTTACACCATTACCGAATACAGATAGGATTGATGGAGAGGTCTCAAGAGAAAAGATTGGAAAGATAAACCAAGAGCAGAGGGCTGTAGCAGAGGGAAAGACTCAGAACCGTCAGACATATCAGCCAGTAAAGGTCAAAGGTGAAAATGACCTGACAAGTGGGGGAATGAACCAAgagaagacagagatagaggTCCTTCAGAGGTCTCGTCAGGAACAGCCAGCTAAGTGTAAAGgcaTGGCCAAGGTCCCCCCGGTTCAGCAGGCCAAAATTACTCTATTTTCACTGCATCAGGGCTAAAGAGCAAGGACCCGTATGATCAACAGCCAGTAAAATGCAAAgaagtcTCTATATTTGCAGCTGGGAAAAATCGTTTGGCTAAAGTCTTGAAACCCCTTGTGCGCAAAAAAATGAAGTCAGAATGCATAGGTAAGAGAGGAGAATGTTACAACTGATAAGTGAAGTTTGTTTGACACAGTATTACATGATTCTAACAGTGATACTTTTTGTTGGGTCTTTTTTCAGTTCCTGACGTTTTCCTTGCTAAGAAGTGACCTCTGCAATTTGAAAAATATTTTCTGAAATTCATTTTCATTCTTTCCCTTGTTTtctatatacatttttaaattcttcaagcattataaaataataaaatcattttatca

Function

NR:

description
myb-like protein X

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036968574.1 True 2201 mRNA 0.43 13 11188626 11196163

Neighbor

gene id symbol gene type direction distance location
atp2b1b LOC106584599 coding downstream 117769 11021804 ~ 11070857 (-)
gtse1 gtse1 coding downstream 167693 11016070 ~ 11020933 (-)
LOC110522734 celsr1 coding downstream 176531 10918587 ~ 11012095 (-)
LOC110521305 LOC106584593 coding downstream 419989 10731413 ~ 10768637 (-)
LOC110521303 LOC106584592 coding downstream 459222 10622559 ~ 10729404 (-)
LOC110522736 LOC106584602 coding upstream 94 11196257 ~ 11198563 (-)
LOC110521316 LOC106597951 coding upstream 132918 11329081 ~ 11331702 (-)
LOC110521317 LOC106597951 coding upstream 145855 11342018 ~ 11344639 (-)
LOC110521321 LOC106584576 coding upstream 453602 11649765 ~ 11656439 (-)
LOC110521324 brd1 coding upstream 739105 11935268 ~ 11949572 (-)
G2199704 NA non-coding downstream 43936 11144365 ~ 11144690 (-)
G2199689 NA non-coding downstream 62818 11125602 ~ 11125808 (-)
G2199603 NA non-coding downstream 229096 10957269 ~ 10959530 (-)
G2199601 NA non-coding downstream 234582 10953784 ~ 10954044 (-)
G2199568 NA non-coding downstream 279809 10907659 ~ 10908817 (-)
G2199747 NA non-coding upstream 30316 11226479 ~ 11226789 (-)
G2199749 NA non-coding upstream 32060 11228223 ~ 11229295 (-)
G2199750 NA non-coding upstream 33215 11229378 ~ 11232079 (-)
G2199799 NA non-coding upstream 105725 11301888 ~ 11302112 (-)
G2199986 NA non-coding upstream 266971 11463134 ~ 11463662 (-)
G2199633 NA other downstream 173658 11014527 ~ 11014968 (-)
G2199159 NA other downstream 1189977 9997420 ~ 9998649 (-)
G2199158 NA other downstream 1191471 9996725 ~ 9997155 (-)
LOC110522725 LOC106584670 other downstream 2063225 9119598 ~ 9125424 (-)
G2201542 NA other upstream 1052788 12248951 ~ 12249982 (-)
LOC110521346 LOC106584547 other upstream 1884433 13078925 ~ 13087584 (-)
LOC110521347 LOC106584546 other upstream 1901867 13094306 ~ 13103545 (-)
urahb urah other upstream 2471051 13666900 ~ 13671199 (-)
si:ch211-106e7.2 LOC106584539 other upstream 2666341 13862396 ~ 13897713 (-)

Expression


Co-expression Network