Item | Value |
---|---|
gene id | LOC110521320 |
gene name | LOC106584577 |
gene type | coding |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_050570.1 |
NCBI id | CM025857.1 |
chromosome length | 46327593 |
location | 11593298 ~ 11594361 (+) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
description |
---|
gamma-crystallin M2-like |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XM_021598802.2 | True | 688 | mRNA | 0.49 | 3 | 11593298 | 11594361 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC110521318 | LOC106597951 | coding | upstream | 171897 | 11418769 ~ 11421401 (+) |
LOC110521319 | LOC106597951 | coding | upstream | 181878 | 11408759 ~ 11411420 (+) |
LOC110520942 | NA | coding | upstream | 307996 | 11284984 ~ 11285302 (+) |
LOC110522737 | NA | coding | upstream | 314351 | 11276180 ~ 11278947 (+) |
LOC118945769 | NA | coding | upstream | 319504 | 11266353 ~ 11273794 (+) |
LOC110521322 | LOC106584576 | coding | downstream | 79378 | 11673739 ~ 11681317 (+) |
LOC110521323 | LOC106561036 | coding | downstream | 89488 | 11683849 ~ 11796935 (+) |
LOC110521327 | LOC106584571 | coding | downstream | 426874 | 12021235 ~ 12023570 (+) |
LOC110521328 | LOC106584569 | coding | downstream | 486001 | 12080362 ~ 12084936 (+) |
LOC110522739 | LOC106584566 | coding | downstream | 492649 | 12087010 ~ 12091818 (+) |
G2200066 | NA | non-coding | upstream | 73880 | 11519154 ~ 11519418 (+) |
G2200065 | NA | non-coding | upstream | 74165 | 11518926 ~ 11519133 (+) |
G2200043 | NA | non-coding | upstream | 86897 | 11506162 ~ 11506401 (+) |
G2199998 | NA | non-coding | upstream | 123584 | 11469263 ~ 11469714 (+) |
G2199833 | NA | non-coding | upstream | 186605 | 11398282 ~ 11406693 (+) |
G2200291 | NA | non-coding | downstream | 206917 | 11801278 ~ 11801513 (+) |
G2200299 | NA | non-coding | downstream | 217298 | 11811659 ~ 11811874 (+) |
G2200309 | NA | non-coding | downstream | 229528 | 11823889 ~ 11824090 (+) |
G2200325 | NA | non-coding | downstream | 246306 | 11840667 ~ 11840887 (+) |
G2200329 | NA | non-coding | downstream | 250598 | 11844959 ~ 11845188 (+) |
G2198837 | NA | other | upstream | 448626 | 11144213 ~ 11144672 (+) |
LOC110521306 | LOC106584595 | other | upstream | 715509 | 10799756 ~ 10920504 (+) |
G2198247 | NA | other | upstream | 1369181 | 10221650 ~ 10224117 (+) |
G2197955 | NA | other | upstream | 1973011 | 9619867 ~ 9620287 (+) |
calcb | LOC100135819 | other | upstream | 2143645 | 9418139 ~ 9449834 (+) |
G2202196 | NA | other | downstream | 1606777 | 13201138 ~ 13201491 (+) |
LOC110521355 | LOC106584515 | other | downstream | 1697875 | 13292190 ~ 13301806 (+) |
tnnt3a | LOC100136357 | other | downstream | 1841447 | 13435735 ~ 13462187 (+) |
G2203653 | NA | other | downstream | 2965086 | 14559447 ~ 14567103 (+) |