aass (LOC100136272)


Basic Information

Item Value
gene id aass
gene name LOC100136272
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050570.1
NCBI id CM025857.1
chromosome length 46327593
location 12906149 ~ 12921316 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>NM_001124530.1
CTGTTAGCTAGTTATAGAAAGGTGGGTTAGATATACTTGCCATTTGTTTACACTTTCCTCGAGTATTCGAGTGGGGTATAGCCATGTTGCGACTCCTAAGACACCAGGCTAGAGGGACGAGGAGCTGCCTCTGTGGCCAGAGGCGCTATGAGCATCACAAGAGCGTCATGGCCATCCGGCGTGAGGACATCAACGTGTGGGAGAGACGGGCGCCCCTGGCTCCGCGCCACGTTAAAGAGATCGTCCATGCTGGCCACAAGGTCCTCGTCCAGCCTTCCAACCGAAGGGCCATCCACGAGAATTATTATGAGAAAGCGGGGGCCATCATTTCCGAGGACATTTCCGAGGCCTCGTTGATCATTGGCGTCAAGAGTCCTCCGGAGGAGAAACTTTATCCCAGAAAGACCTACGCCTTCTTCTCTCACACCATCAAAGCACAGGAAGCTAACATGGGTCTACTGGATGACCTGCTCAAAAAGGAAGTGCGTCTCATCGACTATGAGAAGATGGTCGACGCCAATGGCTTCCGCATCGTGGCATTCGGACAGTGGGCTGGCGTTGCAGGAATGATCAATATTTTGCATGGTTTGGGACTTCGTTTTCTGGCGTTGGGACACCACACTCCTTTTATGCACATCGGTATGGCCCATAACTACAGGAATGTCAGCCAGGCCATCCAGGCAGTGAGGGATTGTGGGTACGAGATCTCCATGGGCCTCATGCCCAAGTCCATCGGCCCAGTGACTTTTGTCTTCACCGGAACAGGCAATGTCTCCAAGGGTGCACAAGATATCATCAATGAGCTTCCTGTAGAATACGTGGAGCCTCATGAGCTAAAAGACGTGTCTCAAACTGGAGACATGTCCCGAGTGTACGCCACCGTTCTGAGTCGTCACCACCATCTGATGAGGAAGAGTGATGGTGTTTATGACCCCCTGGAGTACGAGTATCACCCGGAACTGTACACATCGCACTTTAGAACCAGTGTGGCGCCCTACACCACGTGCCTGATCAACGGCATCTACTGGGACCCCCAGACACCGCGGCTCCTCAGGCGGCTGGACGCCCAGAGGCTCCTGACGCACGTCAAGCCCTCCGCCGCCGCTACGGAGGGATGGCCAGAGCTACCACACAAGCTCCTGGCGATCTGTGACATATCTGCCGACATGGGCGGCTCTATTGAGTTCATGACTGAGTGCACCTCCATCGATAAGCCCTTCTGTATGTACGATGCGGACCAGCACATAGACCACGACAGCGTGGAGGGCACAGGTATCCTCATGTGCTCTATTGATAACCTTCCTGCCCAGCTCCCCATTGAAGCCACTGAGTATTTCGGAGACCGCCTCTTTCCCTACATTTGGGAGATGCTGCTCTCCGATGCCACCAGACCTCTTGAAGAAGAGGACTTCTCACCTCAAGTTAGGGATGCTGTGATAACGTCAGAAGGAAAGCTTACCCCAAAGTTTGAGTACATTGAAGATCTTCGTCAACGAAGTGAGCAAGCCAAGATCATGAAGAGGAGTGGAATGAAGCGAGTGCTACTACTGGGTTCAGGTTACGTGTCGGGCCCTGTCATTGAGTACCTCACCCGGGACCCAGGGACTCAAATCACTGTTGCATCAGTGTTGTTGACCCAGGCAGAGGAGCTGGCAGGGAAATACCCCAACACGATCCCTGTCATGCTGGATGTCACCAGTCAGGAGGGTCATCTGGAGTCCCTGGTCAAAGACCATGACCTAGTAattagTATGCTGCCGTACGGGTATCATCCTGTGATCGCCAAACACTGCATCAACAAGAAGGTAAACATGGTGACAGCCAGCTACCTGAGTCCAGCCATGAAGGACCTCCAACAGAgTGCTGAGGAAGCTGGCATCACCATAGTGAATGAGATGGGCCTGGACCCTGGCATCGACCACATGCTGGCTATGGAGTGCATCGACCAAGCCAAGGCGGACGGCTGCACTATTGAGTCATACAGTTCATTCTGTGGTGGACTCCCTGCACCAGAATGCTCAGACAATCCTCTGCGCTACAAATTCAGCTGGAGTCCATATGGAGTCCTCCTCAATACCATCAGCCCTGCCATCTTCCTCAAGGACAACGAGGTGGTGAGCATCCCAGCGGGCGGCACTCTGATGGAATCCACTTCTCCCATGGACTTCCTGCCCGGCTTCAACCTAGAGGGCTTCCCCAACCGCGACAGCACCAAATACTCAGAACAGTACGGCATCGAGTCAGCCCACACACTCATCAGAGGAACACTCCGCTTCAAGGGTTTCTCCAAGGCCATGAGTGGCTTTGTGAAGCTGGGTCTTATCAACACTGACCCCTGCCCCATGCTGAAGCACACCTCCGCTCCTGTCTCCTGGAAAGAGCTGCTGTGTAACCAGATTGGCCTGCACCCCTCCACCTCTGACAAGGCCTTCGAGGGAGCTGTTTACGACCGCATCGGCCAAGACCCCTTCAAAATGGAAACACTCAAATGgtttGGGATGCTGAGTAAGGAGGCTGTTCCCCATGCAGAGACTGTGCTGGCGTCACTGGCTAAGCACTTAGAGGCCAGGCTCTCCTTTGATGAAGGTGAGCGGGACATGATTATCATGAGGAACGACGTGGGCCTGCGTCACTCTACAGGCGAGCTGGAGACCAAGCACATCAGCCTGGTGGTCTATGGAGACTCCAACGGCTTCTCTGCCATGGCCAAGACCGTGGGTTACCCTGCAGCCATCGCTGCTCGCATGGTGCTGGACGGAGAAATCCGTACGAAGGGACTGGTGGTGCCAATGACTAAGGACATCTATGGACCGGCACTGAAGAGACTGCAGGAGGAGGGCCTCAAGTTCACCTCGAAAAGCACCATCCAAGAGTAGTAACTCATGAGTCATCGGCAGTGTCCCAATAGTGTTTGTTTCCTTTCCTGGCATCCTCCTCCATCTGCACTGATCCCCAAAAAAGACCCCACATTTTTTATTCTTCATTTCAATTCTTACAGAACAGTGCAGTTAAAGGGAAGGAGATGAAGAAAGGAAGCTATTTTAGTCGTAACGCAACACCATGTGATATACAGCCAATCAGTGGCTGGGTACCAGGCTACAGAGAAACGggatgcatctcaatagtctcaaGTTACTTTCTTCGTTTGTCTCCTGTCTTTCATCTGTGCTGATCTGAGAAGGCAGGGTGGGGGAAGGCAATATGGTAGAAATCCTCAGGAGGACAGGATATGAGGGGAAGCTAGTTGTggctattgagatgcaccctgaATTCTGGATGCTTTTGAAACAAGCAATCTACTTTGTGTCAAATAGAACCATTAGGTTGTATGTGAACAGTTTCCAAGCACTTTGCTGCTTTTTAATTAAGGCCATACCATTCTTTACCTGGAGAACCACAACTCCCTGAGTGTCGTTATAACACAACGATCCTGTAATCTGCACAGACCTTCTAAGCTAAAGCGTCTCGTCTGTCCTTGACCGTAACGTATGCTTTTCCTGATGTTGATCAGCTGCTGCACAGTTCTGCTGATCTTTACATATTGATTTGGTTATCTGCTCATTGTAGATGACACTCAAGACAATCAAGATGCTAGAAATATCAGGAGTGTACAGTACCTGCTCAAAGAAAGACCAGTGAATAAGTTTGCGAGTGAACAGCACTAATATAATACCGTAGCCTGGACAGCTTGCTCATAAGAACAAGTAGTTCTAGTAACTCACCAAGAGCCTCTGAATTAAAAAAGAACTGTTTTACTTTTTTACTCAATGACCTGCATCACCGGTCAACCATACCTACCATGTCTCATTTTCGGGCAATAGTTTTAAATCAATCTACTGTATTTGTGTAAAATTCATTTTAAGTAGTGTGCAGATATATTTTAAGAACAAAAAAGATTTATGTTGAATCCTATTTAAAGATCCCAAACACTATTTGTTGAGTAAAATATCCAAGTGTATTTATTTTCTGGATTGGATATAAATGGTCTCCAGTGCTGCAACA

Function

NR:

description
lysine ketoglutarate reductase/saccharopine dehydrogenase

GO:

id name namespace
GO:0055114 oxidation-reduction process biological_process
GO:0016491 oxidoreductase activity molecular_function

KEGG:

id description
K14157 AASS; alpha-aminoadipic semialdehyde synthase

RNA

RNA id representative length rna type GC content exon number start site end site
NM_001124530.1 True 4002 mRNA 0.50 24 12906149 12921316

Neighbor

gene id symbol gene type direction distance location
LOC110521342 LOC106584552 coding upstream 9352 12893320 ~ 12896797 (+)
cadps2 cadps2 coding upstream 15752 12622334 ~ 12890397 (+)
slc13a1 slc13a1 coding upstream 296759 12586973 ~ 12609390 (+)
LOC110521338 LOC105018628 coding upstream 360516 12527612 ~ 12545633 (+)
LOC110521334 LOC106584563 coding upstream 482571 12415118 ~ 12423578 (+)
LOC110521345 LOC106584548 coding downstream 135714 13057030 ~ 13073884 (+)
bet1l bet1l coding downstream 190391 13111707 ~ 13114914 (+)
deaf1 LOC106584542 coding downstream 196251 13117567 ~ 13148519 (+)
cdhr5b LOC106584514 coding downstream 315653 13236969 ~ 13250964 (+)
LOC118945896 NA coding downstream 326746 13248062 ~ 13248115 (+)
G2200967 NA non-coding upstream 2589 12903343 ~ 12903560 (+)
G2200965 NA non-coding upstream 3677 12902137 ~ 12902472 (+)
G2200961 NA non-coding upstream 8321 12897553 ~ 12897828 (+)
G2200879 NA non-coding upstream 147029 12758825 ~ 12759120 (+)
G2200875 NA non-coding upstream 152953 12752681 ~ 12753196 (+)
G2202043 NA non-coding downstream 132451 13053767 ~ 13053972 (+)
G2202046 NA non-coding downstream 134405 13055721 ~ 13055936 (+)
G2202066 NA non-coding downstream 167843 13089159 ~ 13089377 (+)
G2202085 NA non-coding downstream 186121 13107437 ~ 13107769 (+)
G2202206 NA non-coding downstream 288634 13209950 ~ 13210150 (+)
LOC110521323 LOC106561036 other upstream 1109214 11683849 ~ 11796935 (+)
G2198837 NA other upstream 1761477 11144213 ~ 11144672 (+)
LOC110521306 LOC106584595 other upstream 2028360 10799756 ~ 10920504 (+)
G2198247 NA other upstream 2682032 10221650 ~ 10224117 (+)
G2197955 NA other upstream 3285862 9619867 ~ 9620287 (+)
G2202196 NA other downstream 279822 13201138 ~ 13201491 (+)
LOC110521355 LOC106584515 other downstream 370920 13292190 ~ 13301806 (+)
tnnt3a LOC100136357 other downstream 514492 13435735 ~ 13462187 (+)
G2203653 NA other downstream 1638131 14559447 ~ 14567103 (+)
G2203973 NA other downstream 2350729 15272045 ~ 15273733 (+)

Expression


Co-expression Network