LOC110521345 (LOC106584548)


Basic Information

Item Value
gene id LOC110521345
gene name LOC106584548
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050570.1
NCBI id CM025857.1
chromosome length 46327593
location 13057030 ~ 13073884 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036968933.1
agtttgttccagtcattggcagcagagaactggaaggaaaggcggccaaaggaggaattggctttgggggtgaccagtgaattaCGGGGAGTTTCAGGCCCTGGAGTGAACATAATTGGAGACTCGCAAACTCGACTAAAAACGAGGGCTGAAAAGCTCACATGGCAAACTTCTCTTGCTTGGCTAGTCATTTGGACCGGCCCCCAAGATGGTGACGGGGATTCCCTCAAGGGCCTAAAGCGAGAACGACCGGCAGTATTTGCGTTTCCTGGATTGTTAGTGCGCAAGCGCAATCCCGTGAGTCCTTGGATGATCCGCCTGCTGTAGGTTACGCAGCCTGCAAAGGGACACCGACAAAATGCAGAGCTGGAATCAAGTATATCGCACTCTGGCAACGCGTAGCCACCAACTCCCGAATAGGCTCCAGGGTGCAATTGTCTCTGTCAGAACATACTCTGACAAAGCACAAATTGATGCTGATGTCACAGTGGTGGGCTCTGGTCCTGGTGGATATGTTGCCGCAATCAAAGCAGCCCAGCTTGGTTTCAAGACGGTGTGTGTGGAAAAGAATCCCACTCTAGGCGGGACCTGTTTGAATGTCGGCTGTATCCCTTCAAAGGCCCTGCTGAACAACTCCTACCTGTACCATCAGGCCAATGGCAAGGACTTTGAAAGCAGAGGCATTGAAAtCTCGGGGATCACATTGAACCTGGAGAAGATGATGTCACAGAAGAGCGGGGCAGTCAAAGCACTGACTGGAGGCATTGCACATTTATTCAAACAGAACAAGGTGACACACGTGAACGGCTATGGGAAGATAACGGGCAAGAACCAGGTGACGGCCACGGCCGAGGACGGCAGCATGCAGGTCATCAACAGCAAGAACATCCTCATTGCCACTGGCTCCGAGGTCACGCCCTTTCCGGGGATcgagGTTGATGAGGAGACGGTGGTGTCCTCCACGGGAGCCCTGGACCTGAAGAAGGTGCCTGAGCATCTCATCGTCATCGGAGCCGGAGTCATCGGGGTGGAGCTGGGGTCAGTGTGGCAGCGTCTGGGCTCCAAAGTGACAGCGGTGGAGTTCCTGGGCCACGTGGGCGGCTTGGGCATCGACATGGAGATCTCCAAGAACTTCCAACGCATCCTTCAGAAGCAAGGCATAAAGTTCAAGCTGGGCACCAAGGTCATGGGCGCCACCAAGAGGCCCGACGGCCAGATCGACGTGGCTGTCGAGGCGGCAGCCGGAGGGAAGAACGAGACTCTGACGTGTGACGTGCTGCTGGTGTGTATCGGCAGACGGCCCTTCACCAGGAACCTGGGCCTGGATACCGTGGGCCTGGAGCTGGACAACAGGGGACGCATACCAGTCAACAACCGCTTCCAGACCAAAGTACCCAGTATCTATGCCATTGGTGACGTGATCGCCGGGCCCATGCTGGCACACAAGGCAGAGGACGAGGGCATCATCTGTGTGGAAGGCATGGCCGGGGGCGCCGTGCACATCGACTACAACTGTGTCCCCTCTGTAGTCTACACACACCCCGAGGTGGCATGGGTGGGGAAGACAGAGGAGCAGCTCAAAGAGGAGGGCATCCCATACAAGGTGGGAAAGTTCCCGTTTGCCGCCAACAGCCGAGCCAAAACCAACGCAGACACCGATGGCCTGGTGAAGATCCTCGGCCACAAGGAGACCGACAGGATATTGGGCGCTCACATCCTGGGCTCTGGGGCAGGAGAGATAATCAACGAGGCGGCGCTCGCCATGGAGTATGGCGCGTCCTGCGAGGACGTTGCCAGAGTTTGCCACGCCCATCCTACTGTGTCCGAGGCCTTCAGAGAAGCTAACCTTGCAGCCTCCTTCGGGAAAGCTATCAACTTTTAACAACTGTCTTTGCCCGCACAGCTATGTACATAACATAACCGTTTTGTCTCCAACAATCAACGCACACATAATGTACCGTGACACCCTCAAGGGGATACTCTAGATACATAAAGACAAACCGTGTACTACACTTAAATATGGTATGTAAATGTTCTCAATAAAGGGGGTTTGGGTGGTAAAAACAGACTGGAGATTAGTCTTGACTTTCTACTTGGAATGGTTCGCTGCTATATAAATTAGTCGCAGGATATCTAGCATTTTCCCAACACCACTTTCTTAGTGCAGTGCTCAGATGTATATTATTCATGGTTTCAGAGAATGACCGTGGGTTGGCTGGACTACTGCTGTATTTACCAATAAGAGATAAGCCATGACtcaagttttatttattttttaagacTGAAGCATAACGAAACACCTTTTCAAAGGGTGACGGGAAGGCAGTTGTAAAGGCCCAAGCAGCAACTGGCTTGTATGAATTGCAATACTTGAATGTAAATATGgctgtgcactgtgtgtgtgtgtacaattttGCTTAATTCTGATCTCtgcaaataaaataaatgcaGTAGTGATTCAGAACTCCA
>XM_021598844.2
gtgaTATAATGGCGGCCGCTAACCAACGTTAAAGCTGCAtcccgccacctactgtgctggagtgtgtaGTCAATCACGGTTTACAACATTTCTAAGTCCTCCTACCTAACTCGgtactattttattttttatgggTGAAATATTTCTATAACGCTTGTTTAGACGACCGGCAGTATTTGCGTTTCCTGGATTGTTAGTGCGCAAGCGCAATCCCGTGAGTCCTTGGATGATCCGCCTGCTGTAGGTTACGCAGCCTGCAAAGGGACACCGACAAAATGCAGAGCTGGAATCAAGTATATCGCACTCTGGCAACGCGTAGCCACCAACTCCCGAATAGGCTCCAGGGTGCAATTGTCTCTGTCAGAACATACTCTGACAAAGCACAAATTGATGCTGATGTCACAGTGGTGGGCTCTGGTCCTGGTGGATATGTTGCCGCAATCAAAGCAGCCCAGCTTGGTTTCAAGACGGTGTGTGTGGAAAAGAATCCCACTCTAGGCGGGACCTGTTTGAATGTCGGCTGTATCCCTTCAAAGGCCCTGCTGAACAACTCCTACCTGTACCATCAGGCCAATGGCAAGGACTTTGAAAGCAGAGGCATTGAAAtCTCGGGGATCACATTGAACCTGGAGAAGATGATGTCACAGAAGAGCGGGGCAGTCAAAGCACTGACTGGAGGCATTGCACATTTATTCAAACAGAACAAGGTGACACACGTGAACGGCTATGGGAAGATAACGGGCAAGAACCAGGTGACGGCCACGGCCGAGGACGGCAGCATGCAGGTCATCAACAGCAAGAACATCCTCATTGCCACTGGCTCCGAGGTCACGCCCTTTCCGGGGATcgagGTTGATGAGGAGACGGTGGTGTCCTCCACGGGAGCCCTGGACCTGAAGAAGGTGCCTGAGCATCTCATCGTCATCGGAGCCGGAGTCATCGGGGTGGAGCTGGGGTCAGTGTGGCAGCGTCTGGGCTCCAAAGTGACAGCGGTGGAGTTCCTGGGCCACGTGGGCGGCTTGGGCATCGACATGGAGATCTCCAAGAACTTCCAACGCATCCTTCAGAAGCAAGGCATAAAGTTCAAGCTGGGCACCAAGGTCATGGGCGCCACCAAGAGGCCCGACGGCCAGATCGACGTGGCTGTCGAGGCGGCAGCCGGAGGGAAGAACGAGACTCTGACGTGTGACGTGCTGCTGGTGTGTATCGGCAGACGGCCCTTCACCAGGAACCTGGGCCTGGATACCGTGGGCCTGGAGCTGGACAACAGGGGACGCATACCAGTCAACAACCGCTTCCAGACCAAAGTACCCAGTATCTATGCCATTGGTGACGTGATCGCCGGGCCCATGCTGGCACACAAGGCAGAGGACGAGGGCATCATCTGTGTGGAAGGCATGGCCGGGGGCGCCGTGCACATCGACTACAACTGTGTCCCCTCTGTAGTCTACACACACCCCGAGGTGGCATGGGTGGGGAAGACAGAGGAGCAGCTCAAAGAGGAGGGCATCCCATACAAGGTGGGAAAGTTCCCGTTTGCCGCCAACAGCCGAGCCAAAACCAACGCAGACACCGATGGCCTGGTGAAGATCCTCGGCCACAAGGAGACCGACAGGATATTGGGCGCTCACATCCTGGGCTCTGGGGCAGGAGAGATAATCAACGAGGCGGCGCTCGCCATGGAGTATGGCGCGTCCTGCGAGGACGTTGCCAGAGTTTGCCACGCCCATCCTACTGTGTCCGAGGCCTTCAGAGAAGCTAACCTTGCAGCCTCCTTCGGGAAAGCTATCAACTTTTAACAACTGTCTTTGCCCGCACAGCTATGTACATAACATAACCGTTTTGTCTCCAACAATCAACGCACACATAATGTACCGTGACACCCTCAAGGGGATACTCTAGATACATAAAGACAAACCGTGTACTACACTTAAATATGGTATGTAAATGTTCTCAATAAAGGGGGTTTGGGTGGTAAAAACAGACTGGAGATTAGTCTTGACTTTCTACTTGGAATGGTTCGCTGCTATATAAATTAGTCGCAGGATATCTAGCATTTTCCCAACACCACTTTCTTAGTGCAGTGCTCAGATGTATATTATTCATGGTTTCAGAGAATGACCGTGGGTTGGCTGGACTACTGCTGTATTTACCAATAAGAGATAAGCCATGACtcaagttttatttattttttaagacTGAAGCATAACGAAACACCTTTTCAAAGGGTGACGGGAAGGCAGTTGTAAAGGCCCAAGCAGCAACTGGCTTGTATGAATTGCAATACTTGAATGTAAATATGgctgtgcactgtgtgtgtgtgtacaattttGCTTAATTCTGATCTCtgcaaataaaataaatgcaGTAGTGATTCAGAACTCCA

Function

NR:

description
dihydrolipoyl dehydrogenase, mitochondrial-like

GO:

id name namespace
GO:0045454 cell redox homeostasis biological_process
GO:0055114 oxidation-reduction process biological_process
GO:0050660 flavin adenine dinucleotide binding molecular_function
GO:0004148 dihydrolipoyl dehydrogenase activity molecular_function

KEGG:

id description
K00382 DLD, lpd, pdhD; dihydrolipoamide dehydrogenase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036968933.1 False 2469 mRNA 0.52 15 13057030 13073884
XM_021598844.2 True 2386 mRNA 0.51 14 13057343 13073884

Neighbor

gene id symbol gene type direction distance location
aass LOC100136272 coding upstream 135714 12906149 ~ 12921316 (+)
LOC110521342 LOC106584552 coding upstream 160233 12893320 ~ 12896797 (+)
cadps2 cadps2 coding upstream 166633 12622334 ~ 12890397 (+)
slc13a1 slc13a1 coding upstream 447640 12586973 ~ 12609390 (+)
LOC110521338 LOC105018628 coding upstream 511397 12527612 ~ 12545633 (+)
bet1l bet1l coding downstream 37823 13111707 ~ 13114914 (+)
deaf1 LOC106584542 coding downstream 43683 13117567 ~ 13148519 (+)
cdhr5b LOC106584514 coding downstream 163085 13236969 ~ 13250964 (+)
LOC118945896 NA coding downstream 174178 13248062 ~ 13248115 (+)
LOC110521354 LOC106584516 coding downstream 207740 13281624 ~ 13287124 (+)
G2202046 NA non-coding upstream 1094 13055721 ~ 13055936 (+)
G2202043 NA non-coding upstream 3058 13053767 ~ 13053972 (+)
G2200967 NA non-coding upstream 153470 12903343 ~ 12903560 (+)
G2200965 NA non-coding upstream 154558 12902137 ~ 12902472 (+)
G2200961 NA non-coding upstream 159202 12897553 ~ 12897828 (+)
G2202066 NA non-coding downstream 15275 13089159 ~ 13089377 (+)
G2202085 NA non-coding downstream 33553 13107437 ~ 13107769 (+)
G2202206 NA non-coding downstream 136066 13209950 ~ 13210150 (+)
G2202202 NA non-coding downstream 148576 13222460 ~ 13223067 (+)
G2202219 NA non-coding downstream 151118 13225002 ~ 13225210 (+)
LOC110521323 LOC106561036 other upstream 1260095 11683849 ~ 11796935 (+)
G2198837 NA other upstream 1912358 11144213 ~ 11144672 (+)
LOC110521306 LOC106584595 other upstream 2179241 10799756 ~ 10920504 (+)
G2198247 NA other upstream 2832913 10221650 ~ 10224117 (+)
G2197955 NA other upstream 3436743 9619867 ~ 9620287 (+)
G2202196 NA other downstream 127254 13201138 ~ 13201491 (+)
LOC110521355 LOC106584515 other downstream 218352 13292190 ~ 13301806 (+)
tnnt3a LOC100136357 other downstream 361924 13435735 ~ 13462187 (+)
G2203653 NA other downstream 1485563 14559447 ~ 14567103 (+)
G2203973 NA other downstream 2198161 15272045 ~ 15273733 (+)

Expression


Co-expression Network