prr33 (LOC106584523)


Basic Information

Item Value
gene id prr33
gene name LOC106584523
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050570.1
NCBI id CM025857.1
chromosome length 46327593
location 13426651 ~ 13435077 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021598868.2
ACTCTCCTGCAGGGGGCGCCACTCTGAAATAGTATTTTTCAGAGGAGCATCTGGTCGCGGTAGTGAGGGGTGGTGATATCTAAAGTGCTGTGGCCACCCCCTGCCTGGCTGACGGTCGCAGCTAGCGCACTGTCACGACGGAGCACATTCTGAGCAAAAGGCTCAGGTTATATTTTTGGACTGCCATGGAGACTGGCCCTTCCATATGTAGGAAGGGTGTATAGTTGTGCTCAACATGAGCCTCCCGCTCTGATAATCCGGGCCGGGACAAGCAGGCAGCAGCCGGCCGATCCCAAGCAGCAgacacacagGGGACTCCCCTGTCGGGAGTGTGTTGGTCAACGGTAAGAAGAATAACCTGGGGTTTAAACTGCTCATGGCTGCCAGTTATAGCAATGTCAATGAACCAGGCCTGCTTTTCCAGCAGTACCCTCCAGCTCTACTGCCCAAGCCTGGCAAGGAAAATGCTAGACTCCAGAAACTACTCAAGAAAACGgagaaaaaaatcaagaaaaaagCCGCTCCTGAGATCGCAAAGACACCTGTCCCTTTCCGCTCAAGCCTCTCTCCTGTGAATGAAGCAAGTCCTGACTTGGAGCACAGTgaccactcaacccctcccaaaACTCCAGAGGCATCCTTCTACACACAGCACCCCAGATTTTCTGTCAGGCCAGTCTATCGTCATGTGGCATCCCCTTATCCGCAGCAACGAGGAGCCACTTTTGGTGGAACAGCAAGGTTCGCCCCACAGCTGTATGCTGCTCCAGCCCCCACCTTCCCCCAATATGTGGCCCCACTCTACACATTTACTCCAACACCCCCGTCAGCCGCTCCAGGGCCAGCCTTGCATGAATTGGCACCCAAAATGCCTGAGCAAACGTCCTCTGTGCTTGACGTGACAACGACAGCTGCTGCTCAAATTGCTCCTCCAGTCACTGCTTCAGTACCTCATCCACTCAGTGCTCCAGTTGCTCTCGTCACAGTCACTCCTGCTGCCACACAACCTACTCTGCGAATAGCCCCAGTAGTAATACACCGCAAAAGTCCAAGTCCACGTTTTAAAGCTACCGAAGCTGCACTAAAAGCACCCAAATCGATGTTTGATGTCCCTCAAATTAGGGTCTATACAGCATCTATGTCCCCCCTCCATGATTATAGTGGATCAAAGACATCTACTGCAGACGCATTATCTCTGAGTATAACACCCACATCAGAAATCACAAGAGCTTTTACACCAACTGCTGAAATCAAAAGGAGTGCAACACCTACATCCGGGGTAAAAAGAGGTTTAACACCGACACCTGGACTCCAAAGGAGTGCAACGCCTACATCTGAAGTGAAAAGAGCTAAAACACCAACTCATGATTTTTTAACACCAAGAACTCCTTTAGGTCGCCCTAAGACACCCTCATTTCATGTGTCCCGTGCCAAAACACCTGTTTTTGAAATATCAAGAACCAACCCACTTTTATTCGCTGTATCACCCATTACTACAGAGGCACAGATATCTAACACACCAACACCTGGTACTAATGCTGCCTGTCAGTCTTTGTCTGACCCTTCAAAATCATCTTCAACTATTCTAGGTGCAAGAACTCTGAATGGGGAAGAGACGTCAAAAGAGACTCCCACAGCTAAATCACCTCCTCAGAACACTTCAAAACCAGAGGCTCCTCGACACGAAAATCCTGTAGTTGAGTCTGCCAGACCAAAGACCCCGACAGGTCTATTAGGCTATCAAAGACCCAAGACTCCAACAGGTGTTGCACCCACATTTGGGTACCAAAGGCCCAAGACTCCAACAGATATCACACCGAAATCTGCTGCACCCTCCTATGGGTACCAAAGACCCAAGACTCCAACAATTGTCACACTAAAGCCTACAGCGCCCACAGATGGGTACCAAAGACCCAAGACACCAACAAAAGAAACATCAAAACCTACAGCACCCTCAGATGGGTATCCAAGGCCCAAGACTCCCACCAATGAAGGGCATAAACCTATGACTCCAACAATTGAGTATCAAAAACCACAACCACCAGCAGGGTATCAAAGACCAAAGACTCCCACAGCTGGGGTATCATCTATAGGATTTCAAAGGCCCAAGACACCAACATATGTGGATCCTAAACCAAGCCATACCTATTATGGGTTGACTCCTGCTGCATATGTTGCCCATGGTGGAATCCAAagtttttcacctttatttggaATATCCAGGTCTAAGACGCCGACTCAAGAGGAATCTAAAACCCAAGAGCTAGAAGCATCTAAAACACCTACCCAAGAGTTACCTGTAAAATCATATCCTTTGCCCGAGGTGTCAAACCAGGAAGCACCCTTCAAAGAACTGGAAAAAACTATTTCAAGTGAGGCCATAGTATCCATGACAGTAGTTAAGCTTCCGCTTCCAACCATTGTTGTTACACAAGCTGAAGAGGTCTCAGAAACAAGAGTATCCACAGCTGTGACCAGCAAAATATCAACTCCCATTGGTGAAATGCCAAAGGTTAAAACTGTGGCAAACACAAGACCATGGGCTAAATCTCCAACACCAGAGGTTAAAACCCCAGTGAAGACACCAACTTATGGAGTTTACCCAAAACCCAAGACACCCACCCCAGAAACCCAACGCAAGACAATACCTCCTTTCTCAAAAACAGAATCTCCTGTGGCTAAAGCCAGTGTGGTGCAACAGAAAGAGTTGAAGGAATCAACAGAGCCTAAAATGCCAACCAAAGCAACCTCTGAGGCTAAACCAGTAGGGACAAAGCCAACCAATTCTTCTCCACTTGCAAAGACTGCATCTCCTGAGAATCTTTTGTTGCCGGCTAAACCAAAGAATAACCAGGAAGCCAAACCTGAAAAAGTGGTATCAGCTCCAACCACACCATTGACagagaagaaggaagagaggaaagactCTTTCCCAGCAGCTGAACCTCTTCTTAAAGTGATCCAAAAGCCAAAGGGCATGATGAAGTCTAAACTCAGTGGTTGGTCACGGCTCAAGAAGCACATGGTAGTGGAAGAAGAACCACCTATGTTCACAGAATCAGATCCTAAGAAAGAAACCGCCAAGGTGACTGAGCAGGAAGGAGGTGAAGTGAAAAAGGATGAAAAGGTGTTATTTAAAGACATGGTGGCAGCCGTAACAGCTGACGATCCTCCCAAGGCAGCGAAGAAGTGGGATTCTCTTCTCTTCGATATGTTCTCCACTAAAGAGAAGATTATGCAGGTGATTGAAGCCAGCaaaagtgaggaggagaggaaagagcagCCAAAGGATGCAGGGAAAGAAATCCCATCCTTCGCCCATCGTCTGCCTGTTCTCCTTTTCAGCCCAAAGTTTGATGCCAAAAGGCTAAGAGAGGCTGCGTCAAGGCCACTAACTAAAATTTCGACAGTGTTTGAGATGGGTCTCATAGGGCGTAAAAATAAAGATGAGGAACCAAAAGACTTTAACAGAACAGCTAGAGGGTTCACTTGTCCTTAAACCATGTATTTTTGGACTGGTAAAGATTAAACTGAGAAGAACATTTAGAAAAATTCTATTGTTAAATGTTTTATGTGCACTGGTGTAGAAATGGTAGTCATAATGTACAGTTCCCATCTCTCGGCTTGACACAGGATACAATATTTAAGACAGTCTCATAGAGAATGTGGTCTTAACTTTATACTTGATAAATGCACCATGTTGCATTTTGAGCACTGATTGTTTTGTCGTCTGACTATGTTACACATTTGTGTGAATGTCTCTTTCTCTGATAATATGAAAATATTACCTTGACAATCAGAGGATAAGGGAAAATGTATTGTTGTTTTAAAATAATTTAGACATCTCGTGAGATTAAAATGTACAAAGATTAAGTTAATCTCTGAGTTAATTTTTTTGTCCACTGTTGAACCCTGATAGGACAATGAGATTCTTTTTCAGAAGGGGTCCTGAGACTGTAGTGTAATGTACTTAGGTACACCATTTACTAAAAACGATAACTCTCAGTTATAGTACATGTCTTGAAATCGCAGATGAGTGTAGAGCCTATAGACTGTAGTGATGCAGGTTTTGGGCATCTGAAGAAACTTGACTCCAGGGCATTTAGAGAAATGTTTCCAAAGATGGATgaaaaaaagaggagaggatgaaagTAGTAGTGAAGTAGGACTGTATATTTCCCAAAATGGTGCTATTTAATGGTGCTTTCAAATAGACTAGATATTCAGGtgatacttttttttttagaatGTTTGAGTAGCCTGCAGATGCTTATACCAGCTTGGTATCCTTCCCTTTTTTGGACTACAGGTCAGTGAGAGTGTTATTTGAGAAATAGGGTTGCTAACTCCTGTGGGGGACAAGTCAGCTCTATGAAGGATGTGTTTGACTGTTGGTGTGGGTGGATAAGAGGTCAGGGAAAGGGGTTGTGGGATATGGAAGGCAGTGACGACAGACGCTAAGACAAATGTATACAGGAAGTCCCTAAGGCCAAATCCTAACTGGAGATCCACgaatctcccattgacatcaatgcaggATTAACGTGAAAGTAAAATAGACTGAAATATCATGTTTCACACACAGTTTTCAAATACACAGCTTTCAAACGAGGGCTCCGGAAGGGTCAAGAACTGAGAGTGACATTTGACCTTGAGTTTCTGTAGGTTCGTCAGCTTGTTGTAGGTGCTTTGCGTTTTTCTTTCATGCATGTCTATATTAAAAAGATTAAGAACATTGTCTGTTATTGACAGAGTGATGTTCAACTGCTTTGGAATCTGAGATTTTGCTGCATAAGTTTACAGTAAATGttattttctatatatttttgataaaacagaaaataaaaaaGTTTGAATAGAACATTTTTTATGTTGGTTAATGTTTGACATAGAAAGTTCATCTTGAGCTATACAATTAAATAGAGATAATTAATTCTGTAGTGAAGATAACGGGCAGATCAAGGGCTATTGCCCTTTGGTGTTTGATAGAAGTCATGCTATTTAATTGTAGCTGGTATTTTGtagatttaaatgttttatttttatccgCAGGACCAGCAGAATAAAAAGGTGTTTTTTTGCCTCAGAAAA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021598868.2 True 5091 mRNA 0.44 3 13426651 13435077

Neighbor

gene id symbol gene type direction distance location
LOC110521353 LOC106584518 coding downstream 156530 13267984 ~ 13270121 (-)
drd4a LOC106584511 coding downstream 239946 13159502 ~ 13186705 (-)
ticam1 LOC106584543 coding downstream 307953 13108364 ~ 13118698 (-)
LOC110521347 LOC106584546 coding downstream 323106 13094306 ~ 13103545 (-)
LOC110521346 LOC106584547 coding downstream 339067 13078925 ~ 13087584 (-)
myod2 myod2 coding upstream 24257 13459334 ~ 13461444 (-)
LOC110521367 LOC106584527 coding upstream 27513 13462590 ~ 13474314 (-)
LOC110521369 LOC106584531 coding upstream 180180 13615257 ~ 13634264 (-)
LOC110521368 LOC106584530 coding upstream 215781 13650858 ~ 13666753 (-)
urahb urah coding upstream 231823 13666900 ~ 13671199 (-)
G2202449 NA non-coding downstream 63514 13362884 ~ 13363137 (-)
G2202446 NA non-coding downstream 66114 13360143 ~ 13360537 (-)
G2202407 NA non-coding downstream 84661 13337097 ~ 13341990 (-)
G2202409 NA non-coding downstream 106530 13276148 ~ 13320121 (-)
G2202420 LOC106584515 non-coding downstream 124903 13297881 ~ 13301748 (-)
G2202504 NA non-coding upstream 50642 13485719 ~ 13488753 (-)
G2202538 NA non-coding upstream 90894 13525971 ~ 13526293 (-)
G2202924 NA non-coding upstream 211343 13646420 ~ 13646703 (-)
G2202925 NA non-coding upstream 213314 13648391 ~ 13648791 (-)
G2201542 NA other downstream 1176669 12248951 ~ 12249982 (-)
G2199633 NA other downstream 2411683 11014527 ~ 11014968 (-)
LOC110522734 celsr1 other downstream 2495998 10918587 ~ 11012095 (-)
si:ch211-106e7.2 LOC106584539 other upstream 427427 13862396 ~ 13897713 (-)
G2203060 NA other upstream 576076 14011153 ~ 14012512 (-)
G2203363 LOC106613263 other upstream 739364 14174441 ~ 14244462 (-)
G2204129 NA other upstream 1089887 14524964 ~ 14525468 (-)

Expression

prr33(LOC106584523) Expression in all Baseline Samples

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The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 200.
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prr33(LOC106584523) Expression in each Bioproject

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prr33(LOC106584523) Expression in each Sample
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The chart has 1 Y axis displaying Expression. Range: 0 to 600.
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Co-expression Network