Gene
RNA
| Item | Value |
|---|---|
| gene id | si:ch211-106e7.2 |
| gene name | LOC106584539 |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_050570.1 |
| NCBI id | CM025857.1 |
| chromosome length | 46327593 |
| location | 13862396 ~ 13897713 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| uncharacterized protein LOC110521378 isoform X2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021598891.2 | False | 6416 | mRNA | 0.43 | 5 | 13862396 | 13897380 |
| XM_036969492.1 | False | 6497 | mRNA | 0.43 | 4 | 13862396 | 13897380 |
| XM_036969493.1 | False | 6511 | mRNA | 0.43 | 4 | 13862396 | 13897397 |
| XM_021598888.2 | False | 6196 | mRNA | 0.43 | 4 | 13862396 | 13897713 |
| XM_021598890.2 | False | 6246 | mRNA | 0.43 | 5 | 13862396 | 13897713 |
| TU2520518 | True | 1501 | TUCP | 0.40 | 4 | 13862504 | 13897698 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| amn1 | amn1 | coding | downstream | 38744 | 13817955 ~ 13823652 (-) |
| LOC110521374 | LOC106584536 | coding | downstream | 51766 | 13802748 ~ 13810630 (-) |
| LOC110521373 | LOC106584535 | coding | downstream | 59764 | 13782517 ~ 13802632 (-) |
| LOC110521372 | LOC106584534 | coding | downstream | 80950 | 13754120 ~ 13781446 (-) |
| LOC110521370 | LOC106584532 | coding | downstream | 125737 | 13672648 ~ 13736659 (-) |
| nfybb | nfyb | coding | upstream | 18954 | 13916667 ~ 13938633 (-) |
| LOC118945929 | NA | coding | upstream | 20801 | 13918514 ~ 13918626 (-) |
| slc41a2a | slc41a2 | coding | upstream | 41824 | 13939537 ~ 13953305 (-) |
| cnot2 | NA | coding | upstream | 85212 | 13982925 ~ 13991370 (-) |
| LOC110522742 | LOC106584500 | coding | upstream | 343458 | 14241171 ~ 14299087 (-) |
| G2202992 | NA | non-coding | downstream | 2082 | 13858799 ~ 13860314 (-) |
| G2203006 | NA | non-coding | downstream | 5924 | 13856182 ~ 13856472 (-) |
| G2203004 | NA | non-coding | downstream | 7569 | 13854168 ~ 13854827 (-) |
| G2202996 | NA | non-coding | downstream | 19420 | 13842765 ~ 13842976 (-) |
| G2202885 | NA | non-coding | downstream | 110284 | 13751153 ~ 13752112 (-) |
| G2203016 | NA | non-coding | upstream | 8799 | 13906512 ~ 13906965 (-) |
| G2203017 | NA | non-coding | upstream | 9396 | 13907109 ~ 13907371 (-) |
| G2203019 | NA | non-coding | upstream | 10264 | 13907977 ~ 13908192 (-) |
| G2203014 | NA | non-coding | upstream | 16818 | 13914531 ~ 13914807 (-) |
| G2203015 | NA | non-coding | upstream | 17566 | 13915279 ~ 13915563 (-) |
| urahb | urah | other | downstream | 191416 | 13666900 ~ 13671199 (-) |
| LOC110521347 | LOC106584546 | other | downstream | 764093 | 13094306 ~ 13103545 (-) |
| LOC110521346 | LOC106584547 | other | downstream | 774873 | 13078925 ~ 13087584 (-) |
| G2201542 | NA | other | downstream | 1612414 | 12248951 ~ 12249982 (-) |
| G2199633 | NA | other | downstream | 2847428 | 11014527 ~ 11014968 (-) |
| G2203060 | NA | other | upstream | 113440 | 14011153 ~ 14012512 (-) |
| G2203363 | LOC106613263 | other | upstream | 276728 | 14174441 ~ 14244462 (-) |
| G2204129 | NA | other | upstream | 627251 | 14524964 ~ 14525468 (-) |
| G2204181 | NA | other | upstream | 729381 | 14627094 ~ 14629178 (-) |
| G2204315 | NA | other | upstream | 993222 | 14890935 ~ 14893501 (-) |
