Gene
RNA
| Item | Value |
|---|---|
| gene id | cnot2 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_050570.1 |
| NCBI id | CM025857.1 |
| chromosome length | 46327593 |
| location | 13982925 ~ 13991370 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| CCR4-NOT transcription complex subunit 2 isoform X11 |
| id | description |
|---|---|
| K12605 | CNOT2, NOT2; CCR4-NOT transcription complex subunit 2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_036969154.1 | False | 3218 | mRNA | 0.49 | 15 | 13982925 | 13991068 |
| XM_021598912.2 | False | 3028 | mRNA | 0.49 | 15 | 13982925 | 13991268 |
| XM_021598900.2 | False | 3265 | mRNA | 0.49 | 15 | 13982925 | 13991370 |
| XM_021598901.2 | False | 3262 | mRNA | 0.49 | 15 | 13982925 | 13991370 |
| XM_021598902.2 | False | 3259 | mRNA | 0.49 | 15 | 13982925 | 13991370 |
| XM_021598903.2 | False | 3247 | mRNA | 0.49 | 15 | 13982925 | 13991370 |
| XM_021598904.2 | False | 3244 | mRNA | 0.49 | 15 | 13982925 | 13991370 |
| XM_021598905.2 | False | 3244 | mRNA | 0.49 | 15 | 13982925 | 13991370 |
| XM_021598906.2 | False | 3232 | mRNA | 0.49 | 15 | 13982925 | 13991370 |
| XM_021598907.2 | False | 3214 | mRNA | 0.49 | 15 | 13982925 | 13991370 |
| XM_021598909.2 | False | 3211 | mRNA | 0.49 | 15 | 13982925 | 13991370 |
| XM_021598911.2 | True | 3193 | mRNA | 0.49 | 15 | 13982925 | 13991370 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| slc41a2a | slc41a2 | coding | downstream | 29620 | 13939537 ~ 13953305 (-) |
| nfybb | nfyb | coding | downstream | 44292 | 13916667 ~ 13938633 (-) |
| LOC118945929 | NA | coding | downstream | 64299 | 13918514 ~ 13918626 (-) |
| si:ch211-106e7.2 | LOC106584539 | coding | downstream | 85212 | 13862396 ~ 13897713 (-) |
| amn1 | amn1 | coding | downstream | 159273 | 13817955 ~ 13823652 (-) |
| LOC110522742 | LOC106584500 | coding | upstream | 249801 | 14241171 ~ 14299087 (-) |
| LOC110521389 | LOC106584498 | coding | upstream | 310511 | 14301881 ~ 14359576 (-) |
| LOC110520943 | NA | coding | upstream | 440634 | 14432004 ~ 14433690 (-) |
| LOC110517476 | LOC106584495 | coding | upstream | 570527 | 14561897 ~ 14617511 (-) |
| LOC110521392 | NA | coding | upstream | 753431 | 14740548 ~ 14746591 (-) |
| G2203024 | NA | non-coding | downstream | 66592 | 13916032 ~ 13916333 (-) |
| G2203015 | NA | non-coding | downstream | 67362 | 13915279 ~ 13915563 (-) |
| G2203014 | NA | non-coding | downstream | 68118 | 13914531 ~ 13914807 (-) |
| G2203019 | NA | non-coding | downstream | 74733 | 13907977 ~ 13908192 (-) |
| G2203017 | NA | non-coding | downstream | 75554 | 13907109 ~ 13907371 (-) |
| G2203055 | NA | non-coding | upstream | 14086 | 14005456 ~ 14008520 (-) |
| G2203056 | NA | non-coding | upstream | 19325 | 14010695 ~ 14011006 (-) |
| G2203058 | LOC106584504 | non-coding | upstream | 32981 | 14024351 ~ 14025597 (-) |
| G2203069 | NA | non-coding | upstream | 49400 | 14040770 ~ 14041055 (-) |
| G2203074 | NA | non-coding | upstream | 56177 | 14047547 ~ 14048491 (-) |
| urahb | urah | other | downstream | 311945 | 13666900 ~ 13671199 (-) |
| LOC110521347 | LOC106584546 | other | downstream | 884622 | 13094306 ~ 13103545 (-) |
| LOC110521346 | LOC106584547 | other | downstream | 895402 | 13078925 ~ 13087584 (-) |
| G2201542 | NA | other | downstream | 1732943 | 12248951 ~ 12249982 (-) |
| G2203060 | NA | other | upstream | 19783 | 14011153 ~ 14012512 (-) |
| G2203363 | LOC106613263 | other | upstream | 183071 | 14174441 ~ 14244462 (-) |
| G2204129 | NA | other | upstream | 533594 | 14524964 ~ 14525468 (-) |
| G2204181 | NA | other | upstream | 635724 | 14627094 ~ 14629178 (-) |
| G2204315 | NA | other | upstream | 899565 | 14890935 ~ 14893501 (-) |
