fnbp4 (LOC106584504)


Basic Information

Item Value
gene id fnbp4
gene name LOC106584504
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050570.1
NCBI id CM025857.1
chromosome length 46327593
location 14011108 ~ 14031100 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021598914.2
ATACCCTCCCTTTGACACCGGATGTGTTGTGGATAGTTTCTTAAAAAAAATTCAACGGTACAAACAGCAATGCCTTTGGCTCGGTGGGTTAGTGCATAGACGCTGCACCCATATACCTCAGTGGGACCAGAGACCAGCGATGGGAAAGAAAACTCGCACAGGAACAGGAGGACGCAGAACAATACTGCAGCTTTTCCCACCTCGAAGCGGGGCCGTCTGTGGAAGAGAAGACTCTTTAGGTTCAGCATCCGAAGACGAGCAGGAGGGTGGTAACGGGGATGAATACAGTTTTCCAAGAGAAGTAACCACAGAAATGAGGATGCCCGTTAAGGCCACAGAGGGTCTGTCCCTCTTGGGGGCCTATGAGGACAGTGATGACGAAGAGGATGCCGACCCACAGCCTCCCTCTGTCAGGACCCAACACCAGTCTGCAGATATACTCGCCAACTTCATGGCTGAAATTGATGCAATCACTACACAGCCGGGCTCAGAGGAGCCCACAGGGGATCCGTCGGCCCCAGCCCCCACCCCACCTCGTCCAGAACCCAAAGCCCAGCAACATGCCTCTGAGATGGGGACAGAGCCTGAGAGTACTGGGGCGGACTTCCAGTACGATACCCATACTTCACTCGCTGGAGTGGGAGGATTGGAGATGGGGGACTGGCAGGAGGTGTGGGATGACAATACAGGATGTTACTACTACTGGAACACTCAGACCAACGAAGTGGCCTGGCAGCTGCCTTATTACCTGGCCCACCAGGTACAGGGCCTGCAGCAGTacacagacagCTCAACAGTCAATGGCAATGGAGCTACACAGAGTGCAGGATGCTATGCTGAACAACACTCCACTGCTGTTAGTTCCCTAACATCCAAGACAAAAAAGGAAGTGATGGAGAGTGTGGTGGCCCTTACCAGTGAGGAAGAGGAGCGTCATGGTGTGGCAGCCTCCCTCCTCGGTCCCCTCATCCCTGCCGAGGTGAAAGAAGCGGAGGAGAAGTGGCGGAAAAGGCTGGTGGGGGGGCTGGTGGGggggctggaggagagggagaacagcTTGGAGGATAGCCTCCCAGGGTCCCCTGCTCCTCCACTGAATGAGCCAgacacccccacacacccactGAGAGACCAATGCAGCAGGAACCAGTCTGAGGAGGACTCTGAtgcagaggagacagaagaggacACCATGGAGCTGGAGCTGGCTCTGGACAGGAAAAAGGCTGAGCTGCGGGCATTGGAAGAGGGCGATTGCAGTGTGGGGGGCTCCAGCCCCTGTTCTGAGGCCAGTCAGGAGGCCGCCACCGGGCCTCGTAGCCTGCTTCCGAAAAAGGCCATGTGGAAGACGGCCTTCCTCAGAGCAGCCAGCCCCGATTCAAACAGCAGGGACTCAGATACACGGGAAGACCCAGACACAGCACATTCCAAAGTCCCAGAGAAGGCCGGGGAAGAGGAGGACCAGGAAACTGGGGACAAAACGGTTCCTAATGTGCCACCAAAGGAGGAAGTCGAAACTCCAGAGCTCAAGTTTCAGATTGGCGAACTTGCCAACACCTTAACCAGCAAGATGGAGTTTTTGGGGATCAACAAGAAAACTATCTCCAACTTTCAGCTTCTTCTgttacagactgagACGCGGATCGCTGACTGGCGGGAGGGGGCTCTGAACGGGATCTATCTCCGCCGCAGGCTGCAGGAAGCCGCTGAGCACATAAAACATTACGAACTTAACGCCGCCCCTAAAGGCTGGTCGTGCCACTGGGACAGAGAGCAGAGGAGGTATTTCTATACCAATGACCGCACCAGTGCCTCCCAGTGGGACTTCCCAGCAGAGGAAGACGTGGAAGAAGTAGAAAATACCAAGACATCCATACATGGGGACCCCAAACCCCCGCCCGTACCCACTGGTGGGCTCGCAGTTGCAGGAGCTTCAGTCTTCACACCCATTGTCCCCCCTCAGCCTGGCCTTCCCTCCTATTGGTCTGTGCCTCAGCCCCCACTTCCCCCTGACCAGCCCCCTCCCCCTGCCGACTCCCCCCcgcctccccctccacccccagagtcacctccccctctcccccctcctcccctggaggatgatggagagatagaggaggtagagatggaggatgaTGACAGTGAGCCTCCAGCACCTGGAACAGAGCCTCCACTCCCTCCGGGTGTTGTTGGCGTAAAGGTTGTGGAGTCTACAGCCTCGCTGGGTAAGAGTCAGAAACGCAAGGCTTCAGGATCAGGTCAGCTGACCAAGGCTGTAACCATTGGCAGCAGCGCCATCCTCTACACACAGACCATCGCCACAGCAGGAGCTGCCTACTGGGGTGAGTCTGCGGTAGCTACACCGCCACTGCCTTCTGAAACCGTGGCCCCACCTCTCCCACCTCCCCCTACCCGCCCCCCGCTACCCCCCGCTCAGGCCCCCTCTGCCCTGGACCCCACAGGGTTTAAAACATTGCTAACGGACAAGACCAAGAAACTAAAGAAGGATAAGTCGAAGAAGAGCAAGACGAAGATGCCGTCCCTGGTGAAGAAGTGGCAGAGCATCCAGAAAGAGCTGGACGAGGAGGAGCAGGCTAGTTCTAGCGACGAGGACAGGGACCAGCTCAACAAGAGGAGCATTGAGGAGTGGAAACAGCAGCAGTTACTCACGGGCAAAGCTGGAAAGAATGCCAACTTTGAGGCTTTACCTGATGACTGGCGAGAGAGGATGttgaagaagaggaagatgatGAAGAGCACGTAACACACACTCCCCTCcccgcctacacacacacactcctccttaACCTGACTCCAAATGTTGGATAAGAATGAGAGGACTGACTGTGCACTTGACTCACTGTCATTTTGAAACAGGTTTTGAATAGCCCCTCATATCTTCGTCTGTGAATATATTGGATGGgcttgaatgtttttttttttaatttcttGGCTGTAAAACCCACTAGGGTTTTTAATATGGTAAACTGAACTCTCCTACCAAACATCCCCCTCTACCTGTTTAAAGCATAAATGCCGTTTTCTGTGAAACGTACGGCACTAAGAATGCTGGAGTTTCTAAATCTTTGTTTGTAATGGAGATCAACTCTTTGTTTTGACCTCCCCATGTTCCTCTTGCCCATTTTTAATAAACTATGATTTAATAACGTCTTCCTAATAATAACTGCTGTTTCTCTGAATAATCCACACTTCCATTTTATTAGAGGGCGGATGGAAATGCAATGAGCGCTTGTCTTTTCTAATGCTTCAACTATAGTAATTAACAGTACTTTTAGTTTATTCATGGTATATCCTGAACATACCCTTTCATCAGTTTTTTTATCTGACTTCAGATGGGAGATTTAAGTGATGTATAAAATGTGAATTATCACATGGCCCTATAGTGGAACCTCTAAATTGCAACAATTCTCTGCAGTTTTTCAATTTAAGCCAGTAGATGAGTATGCAACCAGTACCCATCCCACTCTCTTGTCAAGAGCTAACAAATAATCCTCATAATTCAGAGGTCTTTTCTTGTGCTGAAAACCATCAAGACTAGTTTGGTGGCAAGGGGAGTGTctttttttggggtgggggggggtgcagTTTTTCAGCTGTGTGAATTCCATAGGCCTATGTCCTAGTAAAACACTGGCAACAATTTTGTATTCAAGTTATTAAACTTTTTTGGGGAAACTTTAA
>XM_021598915.2
CCTCAGAGGGTCTGTCCCTCTTGGGGGCCTATGAGGACAGTGATGACGAAGAGGATGCCGACCCACAGCCTCCCTCTGTCAGGACCCAACACCAGTCTGCAGATATACTCGCCAACTTCATGGCTGCAAATTCCCCTGCGGCACTCGCGTGCCTTACGTTGCTGATGCCTGTCTAGAGTGATGTGCCATCCCCGCAGcttccgcaatggattagtctacTGATTCAGGAAATTGATGCAATCACTACACAGCCGGGCTCAGAGGAGCCCACAGGGGATCCGTCGGCCCCAGCCCCCACCCCACCTCGTCCAGAACCCAAAGCCCAGCAACATGCCTCTGAGATGGGGACAGAGCCTGAGAGTACTGGGGCGGACTTCCAGTACGATACCCATACTTCACTCGCTGGAGTGGGAGGATTGGAGATGGGGGACTGGCAGGAGGTGTGGGATGACAATACAGGATGTTACTACTACTGGAACACTCAGACCAACGAAGTGGCCTGGCAGCTGCCTTATTACCTGGCCCACCAGGTACAGGGCCTGCAGCAGTacacagacagCTCAACAGTCAATGGCAATGGAGCTACACAGAGTGCAGGATGCTATGCTGAACAACACTCCACTGCTGTTAGTTCCCTAACATCCAAGACAAAAAAGGAAGTGATGGAGAGTGTGGTGGCCCTTACCAGTGAGGAAGAGGAGCGTCATGGTGTGGCAGCCTCCCTCCTCGGTCCCCTCATCCCTGCCGAGGTGAAAGAAGCGGAGGAGAAGTGGCGGAAAAGGCTGGTGGGGGGGCTGGTGGGggggctggaggagagggagaacagcTTGGAGGATAGCCTCCCAGGGTCCCCTGCTCCTCCACTGAATGAGCCAgacacccccacacacccactGAGAGACCAATGCAGCAGGAACCAGTCTGAGGAGGACTCTGAtgcagaggagacagaagaggacACCATGGAGCTGGAGCTGGCTCTGGACAGGAAAAAGGCTGAGCTGCGGGCATTGGAAGAGGGCGATTGCAGTGTGGGGGGCTCCAGCCCCTGTTCTGAGGCCAGTCAGGAGGCCGCCACCGGGCCTCGTAGCCTGCTTCCGAAAAAGGCCATGTGGAAGACGGCCTTCCTCAGAGCAGCCAGCCCCGATTCAAACAGCAGGGACTCAGATACACGGGAAGACCCAGACACAGCACATTCCAAAGTCCCAGAGAAGGCCGGGGAAGAGGAGGACCAGGAAACTGGGGACAAAACGGTTCCTAATGTGCCACCAAAGGAGGAAGTCGAAACTCCAGAGCTCAAGTTTCAGATTGGCGAACTTGCCAACACCTTAACCAGCAAGATGGAGTTTTTGGGGATCAACAAGAAAACTATCTCCAACTTTCAGCTTCTTCTgttacagactgagACGCGGATCGCTGACTGGCGGGAGGGGGCTCTGAACGGGATCTATCTCCGCCGCAGGCTGCAGGAAGCCGCTGAGCACATAAAACATTACGAACTTAACGCCGCCCCTAAAGGCTGGTCGTGCCACTGGGACAGAGAGCAGAGGAGGTATTTCTATACCAATGACCGCACCAGTGCCTCCCAGTGGGACTTCCCAGCAGAGGAAGACGTGGAAGAAGTAGAAAATACCAAGACATCCATACATGGGGACCCCAAACCCCCGCCCGTACCCACTGGTGGGCTCGCAGTTGCAGGAGCTTCAGTCTTCACACCCATTGTCCCCCCTCAGCCTGGCCTTCCCTCCTATTGGTCTGTGCCTCAGCCCCCACTTCCCCCTGACCAGCCCCCTCCCCCTGCCGACTCCCCCCcgcctccccctccacccccagagtcacctccccctctcccccctcctcccctggaggatgatggagagatagaggaggtagagatggaggatgaTGACAGTGAGCCTCCAGCACCTGGAACAGAGCCTCCACTCCCTCCGGGTGTTGTTGGCGTAAAGGTTGTGGAGTCTACAGCCTCGCTGGGTAAGAGTCAGAAACGCAAGGCTTCAGGATCAGGTCAGCTGACCAAGGCTGTAACCATTGGCAGCAGCGCCATCCTCTACACACAGACCATCGCCACAGCAGGAGCTGCCTACTGGGGTGAGTCTGCGGTAGCTACACCGCCACTGCCTTCTGAAACCGTGGCCCCACCTCTCCCACCTCCCCCTACCCGCCCCCCGCTACCCCCCGCTCAGGCCCCCTCTGCCCTGGACCCCACAGGGTTTAAAACATTGCTAACGGACAAGACCAAGAAACTAAAGAAGGATAAGTCGAAGAAGAGCAAGACGAAGATGCCGTCCCTGGTGAAGAAGTGGCAGAGCATCCAGAAAGAGCTGGACGAGGAGGAGCAGGCTAGTTCTAGCGACGAGGACAGGGACCAGCTCAACAAGAGGAGCATTGAGGAGTGGAAACAGCAGCAGTTACTCACGGGCAAAGCTGGAAAGAATGCCAACTTTGAGGCTTTACCTGATGACTGGCGAGAGAGGATGttgaagaagaggaagatgatGAAGAGCACGTAACACACACTCCCCTCcccgcctacacacacacactcctccttaACCTGACTCCAAATGTTGGATAAGAATGAGAGGACTGACTGTGCACTTGACTCACTGTCATTTTGAAACAGGTTTTGAATAGCCCCTCATATCTTCGTCTGTGAATATATTGGATGGgcttgaatgtttttttttttaatttcttGGCTGTAAAACCCACTAGGGTTTTTAATATGGTAAACTGAACTCTCCTACCAAACATCCCCCTCTACCTGTTTAAAGCATAAATGCCGTTTTCTGTGAAACGTACGGCACTAAGAATGCTGGAGTTTCTAAATCTTTGTTTGTAATGGAGATCAACTCTTTGTTTTGACCTCCCCATGTTCCTCTTGCCCATTTTTAATAAACTATGATTTAATAACGTCTTCCTAATAATAACTGCTGTTTCTCTGAATAATCCACACTTCCATTTTATTAGAGGGCGGATGGAAATGCAATGAGCGCTTGTCTTTTCTAATGCTTCAACTATAGTAATTAACAGTACTTTTAGTTTATTCATGGTATATCCTGAACATACCCTTTCATCAGTTTTTTTATCTGACTTCAGATGGGAGATTTAAGTGATGTATAAAATGTGAATTATCACATGGCCCTATAGTGGAACCTCTAAATTGCAACAATTCTCTGCAGTTTTTCAATTTAAGCCAGTAGATGAGTATGCAACCAGTACCCATCCCACTCTCTTGTCAAGAGCTAACAAATAATCCTCATAATTCAGAGGTCTTTTCTTGTGCTGAAAACCATCAAGACTAGTTTGGTGGCAAGGGGAGTGTctttttttggggtgggggggggtgcagTTTTTCAGCTGTGTGAATTCCATAGGCCTATGTCCTAGTAAAACACTGGCAACAATTTTGTATTCAAGTTATTAAACTTTTTTGGGGAAACTTTAA

Function

NR:

description
formin-binding protein 4-like isoform X1

GO: NA

KEGG:

id description
K24774 FNBP4; formin-binding protein 4

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021598914.2 False 3702 mRNA 0.52 17 14011108 14031100
XM_021598915.2 True 3472 mRNA 0.52 16 14013242 14031100

Neighbor

gene id symbol gene type direction distance location
lrrc10 LOC106584482 coding upstream 2997 14005458 ~ 14008111 (+)
washc4 kiaa1033 coding upstream 29299 13956515 ~ 13981809 (+)
LOC110521381 NA coding upstream 65986 13914886 ~ 13945122 (+)
etfbkmt etfbkmt coding upstream 196361 13813305 ~ 13814906 (+)
LOC110522741 LOC106584529 coding upstream 360381 13582717 ~ 13650727 (+)
LOC110521386 LOC106584503 coding downstream 124409 14155509 ~ 14164819 (+)
LOC110521387 LOC106584502 coding downstream 160024 14191124 ~ 14230103 (+)
LOC110521390 LOC106584497 coding downstream 338926 14370026 ~ 14381434 (+)
LOC110521391 LOC106584496 coding downstream 352307 14383407 ~ 14427519 (+)
LOC118945780 NA coding downstream 730028 14761128 ~ 14772721 (+)
G2202765 LOC100194703 non-coding upstream 17330 13919300 ~ 13993778 (+)
G2202780 NA non-coding upstream 96682 13913976 ~ 13914426 (+)
G2202775 LOC106566315 non-coding upstream 104995 13905278 ~ 13906113 (+)
G2202755 NA non-coding upstream 111732 13899082 ~ 13899376 (+)
G2202748 NA non-coding upstream 154490 13856230 ~ 13856618 (+)
G2202815 NA non-coding downstream 2312 14033412 ~ 14033714 (+)
G2202830 NA non-coding downstream 26815 14057915 ~ 14058236 (+)
G2202832 NA non-coding downstream 29437 14060537 ~ 14060746 (+)
G2202841 NA non-coding downstream 39467 14070567 ~ 14070790 (+)
G2203102 NA non-coding downstream 48726 14079826 ~ 14080150 (+)
tnnt3a LOC100136357 other upstream 548921 13435735 ~ 13462187 (+)
LOC110521355 LOC106584515 other upstream 715948 13292190 ~ 13301806 (+)
G2202196 NA other upstream 809617 13201138 ~ 13201491 (+)
LOC110521323 LOC106561036 other upstream 2214173 11683849 ~ 11796935 (+)
G2198837 NA other upstream 2866436 11144213 ~ 11144672 (+)
G2203653 NA other downstream 528347 14559447 ~ 14567103 (+)
G2203973 NA other downstream 1240945 15272045 ~ 15273733 (+)
G2205546 NA other downstream 2199071 16230171 ~ 16232396 (+)
G2206179 NA other downstream 3132537 17163637 ~ 17164159 (+)
G2206268 LOC106584433 other downstream 3144317 17175417 ~ 17175872 (+)

Expression


Co-expression Network