LOC110521387 (LOC106584502)


Basic Information

Item Value
gene id LOC110521387
gene name LOC106584502
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050570.1
NCBI id CM025857.1
chromosome length 46327593
location 14191124 ~ 14230103 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021598917.2
ATGCTCACCCGGGTGAAATCAGCTGTGGCCAATTTTATGGGCGGTATGATGGCTGGCAGTTCGAACAGTGAACCTCTCGGTGGCTCCGATTTACCGCTGAAATACCCGTACACAAGACCGGAGTTTCTGGGACTGTCACCGGATGAAATCGAGTGCTCGGCGGATCATATTGCTCGGCCGATACTCATTCTGAAAGAGACGAAGAGGCTGCCGTGGGCCACTGGTTATGCAGAggTGATCAACGCGGGGAAGAGCCATCTGAACGAAGACCAGGCGTGctgtgaggtggtggtggtgaggagtAGACCCAGTGCCGGGGGCAACTCCACCTCCAACAGGCCCCCTACCACCCGGAGGAGGTCCTCTCTGCCCAATGGAGAGGGGCTGGGGCTCAGGGAGAACACTgacgTGGAGCCCGGACTGACCTTCCACTACTGGGGTCTGTTTGACGGCCATGCGGGCTCAGGGGCAGCGGTGGTGGCATCTAAGCTGCTCCAGCACCACATCATAGAACACCTCCAGGAGGTCCTGGATGTCCTGAGGAACCCGGCCCAGCTGGCCCCCATCATCCAGGGGGAAGAGCCCACCAACTACCACCTCACCCCCACCACCCACCGGGGCATCACCAGGGCCGCCTCCCTGCGGGGGGCTGCAGGGGCCCCCGGCTCCCCCAGCCACCCCCCGCCTACCAGGTTCTTCACGGAGAAGAAGATCCATCACGAGAGCATGGTGATGGGAGCCATTGAGAACGCCTTTAAAGAGATGGATGCCCAGATTGAGAGAGACAAGGCTGTGTTTAACATCTCAGGAGGCTGTACTGCTCTGTGTGCACTCTTTTTATTGGGAAAGCTCTATGTTGGAAATGCCGGGGACAGCAGAGCGATCATTATCCAGGGTGGAGAGGTCATCCCCATGTCTACAGAGTTCACACCAGAGTCAGAGAGGCAACGCCTGCAGTTCCTGGCCTACATGCAGCCGCACCTGTTAGGAGGCGAGTTTACACATCTGGAGTTCCCGAGACGTGTACAGAGGAAGGAGGTGGGGAAGAGGATGCTTTACCGGGACTTCACTATGTCTGGCTGGGCATATAAAACCATTGAGGACGACGACCTGAAGTTTCCCCTAATCTACGGCGAAGGGAAGAAGGCCCGTGTGTTGGCTACCATCGGGGTCACCAGGGGCCTGGGAGACCACGAGCTCAAAGTGCATGACTCCAACATCTACATCAAGCCCTTCCTGTCCTGCTGTCCCGAgGTCAAAGTGTACCCACTGACGCAGTATGAACATGGGGTGGATGACGTCCTGGTGATGGGGACAGATGGGCTGTGGGACGTCCTATCCAACCAGGACGTTGCCGAGGCAGTCACTGGTTTTCTTGCCAACTGTGGCCCTGACGACCAGTATAGGTACACGATGGCAGCTCAGGACTTGGTGATGAGGGCACGGGGGGTCCTGAAGGACCGAGGCTGGAGGATAGCCAACGAACGTCTGGGCTCCGGAGACGACATCTCTGTCTACATCATCCCTCTGAGGTACGGCAACCTGCAGACCTAGCCGTAGCCCAGGTCCAGCTCACCACCACCCAGCATGGGACTCTAGACAGGTTCTgtgtccaaaatgacaccctattccctatatagtgcactactttaggccaagGCCATGACAAGTattgcattatgtagggaatagggtgcaattgtAGGCGTTCTCCCAACCGGCAGACCTAGCTAAGGGCCAGCTCACCACCCACCATGGGACTCTAGACAGGCTGCCCCCCTCTACCATCTATCCTATCCCCTCTGTCCTAAAATCAATGCCCTGGTGCTCACACAGTGCTTCATCCCAAATGGTTTTCCTGAGGAAACAAAATGGCTGCTGGTTGTTGTACAGTACAGGGTAGCATGATTGTTCTTGTCTCTTGTGAAAGGAAGGAAAATCTCAGGATGTtccaatatacagtaccttcagttTCTTCTTGTGTTTCTGTGCTGCAAGGGAACAAATGACAATTCTGGATTTAAAGGCCCACCGGGGCCATGTATTTCGAGTAATTCATAACCAACCCTTTGTTGTTTTTCAGTAGGCTACGGCTTCTGCATTGCCAAATATTTTCTGATGCAATGGAAGAGTATTGCTTTCACAAAGGCAATACTTTTCTTATGGATATCGCATGGGgaaagacaaagggactctcttTCAAAGTGCAATGCTTTATGGGATTGTTTTTTATCCTTTTTAGATGAGATATTGTTACTATATTACTGATTATGAACAAGTAAAAATGCTTAGAAATGAGTGGATTTTAGATATCCATGCTGTACAGTGTAAAGAACCTGTTTTGAGTtgtctgtatatactgtaccgtTATGAAACCTCTTCTGTCCCTATGATCCATTACGTACATAAGTCACTGACCTAGACAGTACAATCCTACCACAGACAAACTATAGCGTTCAGCTTTCAGAACTATTGTTTGGGTGTTCCTCTCCAAGTGAAAGGTGAATGAAGTCAGACTTATGGTCGTTTTATTGCCAGTGACAATGTTAATCTCtcattgtttatttttttcttcattttgacAGGCTTGTTTTTTCTTTCATTGCGATGACCCTGAAAGTTGATTTACTTAAAGGATGTGCAGAAACACATTTTATACATAATTGTGAAACGGCTACCTCATGTTTCTGCtttgttttaaacaagatatccAATCCCTTGCCCCAGTTGAACCTTTTTAGTTTCCTATTTGTCAAATACTTGTTTGCATCATCCTGTTTGCGTGCTCGTTTACTTTTCAAATATGAAACAGCCATTCCTTAATGAATTGTCACTAGTTTTCATACAAATATAGCTTAGTTTAGCTCTGTAACAAAATATTAGGAAATGTGTTCTGTATAGCGACATGAATAGGATGTAAAATTGGTCAAGTTTACTGAATGTTCTTACAGCTGAATCCTAAATTGAGACATGGTTGTCTCATTTTATCTTATTGAGACAAATGCTTGATTTATGCAAAAGTTCAAGTTACGAGTGTGGATCTCTCAAATGAACATTCAGTTCTTGAAGGCTAGAATTACATCCCTTAAGCAGATACATTTATTAGCAAGTGCTTGGGAGAAACACATGAGATTAAATTGAATGCTGGTATGAAaa

Function

NR:

description
protein phosphatase 1H-like

GO: NA

KEGG:

id description
K17503 PPM1H, ARHCL1; protein phosphatase 1H

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021598917.2 True 3156 mRNA 0.48 10 14191124 14230103

Neighbor

gene id symbol gene type direction distance location
LOC110521386 LOC106584503 coding upstream 26305 14155509 ~ 14164819 (+)
fnbp4 LOC106584504 coding upstream 160024 14011108 ~ 14031100 (+)
lrrc10 LOC106584482 coding upstream 183013 14005458 ~ 14008111 (+)
washc4 kiaa1033 coding upstream 209315 13956515 ~ 13981809 (+)
LOC110521381 NA coding upstream 246002 13914886 ~ 13945122 (+)
LOC110521390 LOC106584497 coding downstream 139923 14370026 ~ 14381434 (+)
LOC110521391 LOC106584496 coding downstream 153304 14383407 ~ 14427519 (+)
LOC118945780 NA coding downstream 531025 14761128 ~ 14772721 (+)
LOC110521393 LOC106584489 coding downstream 550807 14780910 ~ 14848042 (+)
LOC110521396 yars2 coding downstream 625246 14855349 ~ 14862158 (+)
G2203165 NA non-coding upstream 23909 14126291 ~ 14167215 (+)
G2203179 NA non-coding upstream 46223 14143359 ~ 14144901 (+)
G2203173 NA non-coding upstream 54414 14136409 ~ 14136710 (+)
G2203102 NA non-coding upstream 110974 14079826 ~ 14080150 (+)
G2202841 NA non-coding upstream 120334 14070567 ~ 14070790 (+)
G2203250 NA non-coding downstream 31818 14261921 ~ 14265219 (+)
G2203280 NA non-coding downstream 79425 14309528 ~ 14310748 (+)
G2203310 NA non-coding downstream 127474 14357577 ~ 14359683 (+)
G2203461 NA non-coding downstream 134466 14364569 ~ 14365110 (+)
G2203462 LOC100194703 non-coding downstream 136439 14366542 ~ 14366850 (+)
tnnt3a LOC100136357 other upstream 728937 13435735 ~ 13462187 (+)
LOC110521355 LOC106584515 other upstream 895964 13292190 ~ 13301806 (+)
G2202196 NA other upstream 989633 13201138 ~ 13201491 (+)
LOC110521323 LOC106561036 other upstream 2394189 11683849 ~ 11796935 (+)
G2198837 NA other upstream 3046452 11144213 ~ 11144672 (+)
G2203653 NA other downstream 329344 14559447 ~ 14567103 (+)
G2203973 NA other downstream 1041942 15272045 ~ 15273733 (+)
G2205546 NA other downstream 2000068 16230171 ~ 16232396 (+)
G2206179 NA other downstream 2933534 17163637 ~ 17164159 (+)
G2206268 LOC106584433 other downstream 2945314 17175417 ~ 17175872 (+)

Expression


Co-expression Network