LOC110521391 (LOC106584496)


Basic Information

Item Value
gene id LOC110521391
gene name LOC106584496
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050570.1
NCBI id CM025857.1
chromosome length 46327593
location 14383407 ~ 14427519 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036968912.1
TCTGAGACAGTCACGCTGCGATTCATTCAGCCACATCACCCACACGCATACTCCTGCCCAGCGTGAGCTCACAGTCTGTCTACCTTTCGCTTGAAAGTCTGCGTGTCCGTGAGAAACTGTGCTGTTGTTTCACACCTAAGGCAGAATATTACAGATCTGACTGTTGTACACTTTCTTTAGTTTAGCAAGAATCTCACCTCCTTCCAATGGGTCCCGGTATAGTTATACTTTTCTCTCTGTTCGGAGTTCTCAACGGACAAGGTGGAAAACAGATGTCAATAGAGGAGTGCTGTAAGGATGGTCGGGACCGGGGCATTGATAACCAGGACTGCACagccctccctctcatctccgaGTCCACCACATGCAGGATAGTACAGGAGCAGTGCTGCGCGACGGTACTGGAGGACTCCATCTGCACAAACGGCATCAACATGGCCAAAGACCAGGGGGGCTGTGACACCCAGTTTCCTGGAAGCACCTGCGAGACCAAGaccacaaggATGTGCTGTGACTGTTGTCTGCTGGGCCGGGCTGCTCAGGAGAAGGGTCTGCCCTGTGACCACAGCCTGTCTCTGGGTTACCAGTGTGGCCTGGTGTCCCGGGCCTGCTGTGATGACGGAGCCCCCGATGTGAAGACCATCACTCTGGTTCCAGACAAAGACAACGAGGCCCTCACTGGCAAGGATGATCCGTTACTGAATGAGTGCAGTAATGCGAAGTGTGCACAGGAATGTGTGGGCAACGGCACCTGTGCCTGCTTCAAAGGCTACaaactcaaaccagatgggaagaACTGTGAAGatataaaTGAGTGCCTGCTGGGTGCCAGTAACTGCCGAGGAGGTGAGCGCTGCATCAACACGCTGGGGTCATTTCGTTGCCAAAGAGAGGTCAGCTGTGGTACCGGTTACGAGCTTACCGACAGCAACAACTGCAAAGACATTGACGAGTGTGAGTCGGGCACCCACAACTGCGCCCCGGACTTTATGTGTCAGAACACTCAGGGGTCATTCCGCTGTCGGCCCAAGAACCAGTGTGGCGATGGATACATCCAGGATGCTCTGGGCAGCTGCATCGACATCAATGAGTGTCTGGCCCAGACTGGGCCTTGCCACCCTGGCCAGTCGTGTATGAACACGGTGGGCTCCTTCACCTGCCAGAGGAACTCTGTCAACTGTGGCCGGGGATACCACCTAAACGACAACGGCAACCGCTGCGTGGATATTGATGAGTGTAAAGGTCCTGATGGAGAGTGTGCAGGCCATGGCTGTATCAACCTGGTAGGATCGTTCCGTTGTGAGTGTAAGATTGGCTTCATCTTCAACAGCATCAGCCGCGTATGCGAAGATATCAATGAGTGCAGGCACTACCCTGGGCGCCTCTGTGCCCACAAGTGTGAGAATGCCGTGGGGTCCTATAAGTGCAGCTGCACCCAAGGCTTCAAGCTGGCCAGCGACGGCAGGAACTGTGATGATCTAAACGAATGTGAGAGCAGCCCTTGCAGTCAAGAGTGTGCCAACGTGTACGGCTCCTACCAGTGCTACTGTCGCCGTGGCTACCAGCTCAGTGACAGGGATGGCATCAACTGTGAAGACATTGATGAGTGTGCCTTGCCCACCGGGGGTCACATCTGTTCCTACCGCTGCCACAACACCCCCGGGAGCTTCCACTGCAACTGCCCCGCCACCGGCTATACTCTGGCCCCCAATGGACGCAGCTGCCAGGATGTTGATGAGTGTGTGACAGGGACACACACCTGCTCTGAGACAGAGAGCTGCTTCAATGTACAGGGTGGATTCAGATGCTTGTCCTTTGAGTGTCCGCCAAACTATCGCCGAGCAGGAGAGAATCGTTGTGAACGCTTGCTTTGCAATCAGACTAGCGAGTGCCTGGCCTTGCCTCTGAGAATAACCTACTACCACCTCACCTTCCCCACCAACATCCCCGTGCCCACCAACGTCTTCCGCATGGGCCCGTCCAACACCGTGCCCGGAGACCATGTTCAGATTGCCATCGTCGGCGGCAACAAGGGCGACTTCTTCGGCATGCAGAGAGTGCCCTCTGGTGGCGAGATGGCTGTGACGCGGCCCATCACGGCGCCGCAGGACTTTGAGCTGTCTCTGGAGATGAGACTGCTGCGTTACGGCACCACCAGCACCTACCTAGCCAAAGTCCTGGTGTTTGTTGTCCAGGAGCAGCCCATCCTACCATATAACGCTATCCCTGAGTAGAGGGTAGTAGCATATAGCAACAAGAATACGGCAACAACAATAACAGCCAAAAAAGAGCAAACACTGCCATGATAAGCAAGCACAAACACAGTTGACATAGACCAGAAGCAGCATTCTGTCATTTGTATCCTTGTTTTTGGTCTTATTGTAGTTTTTGTGATTACTGTAGCTAAGTATAGCCCTGCAAAATAGGCCAAATGTAATGTACTCACTTGGAGGTACAGCATTTGAATAGCAGCTAGGTGGCACTCTAGGGCAGGGTATTGAGGTAGTGGCCTGGGGATGCCTATTGATTGCTGTATGTAATGGTGTAGTCTGCAGTCCTACAGGATCTTATGGTTGATTTGTTTAATGAAATGTTTTCTATTAAAATTGGACTAGACACAA
>XM_036968911.1
TCTGAGACAGTCACGCTGCGATTCATTCAGCCACATCACCCACACGCATACTCCTGCCCAGCGTGAGCTCACAGTCTGTCTACCTTTCGCTTGAAAGTCTGCGTGTCCGTGAGAAACTGTGCTGTTGTTTCACACCTAAGGCAGAATATTACAGATCTGACTGTTGTACACTTTCTTTAGTTTAGCAAGAATCTCACCTCCTTCCAATGGGTCCCGGTATAGTTATACTTTTCTCTCTGTTCGGAGTTCTCAACGGACAAGGTGGAAAACAGATGTCAATAGAGGAGTGCTGTAAGGATGGTCGGGACCGGGGCATTGATAACCAGGACTGCACagccctccctctcatctccgaGTCCACCACATGCAGGATAGTACAGGAGCAGTGCTGCGCGACGGTACTGGAGGACTCCATCTGCACAAACGGCATCAACATGGCCAAAGACCAGGGGGGCTGTGACACCCAGTTTCCTGGAAGCACCTGCGAGACCAAGaccacaaggATGTGCTGTGACTGTTGTCTGCTGGGCCGGGCTGCTCAGGAGAAGGGTCTGCCCTGTGACCACAGCCTGTCTCTGGGTTACCAGTGTGGCCTGGTGTCCCGGGCCTGCTGTGATGACGGAGCCCCCGATGTGAAGACCATCACTCTGGTTCCAGACAAAGACAACGAGGCCCTCACTGGCAAGGATGATCCGTTACTGAATGAGTGCAGTAATGCGAAGTGTGCACAGGAATGTGTGGGCAACGGCACCTGTGCCTGCTTCAAAGGCTACaaactcaaaccagatgggaagaACTGTGAAGatataaaTGAGTGCCTGCTGGGTGCCAGTAACTGCCGAGGAGGTGAGCGCTGCATCAACACGCTGGGGTCATTTCGTTGCCAAAGAGAGGTCAGCTGTGGTACCGGTTACGAGCTTACCGACAGCAACAACTGCAAAGACATTGACGAGTGTGAGTCGGGCACCCACAACTGCGCCCCGGACTTTATGTGTCAGAACACTCAGGGGTCATTCCGCTGTCGGCCCAAGAACCAGTGTGGCGATGGATACATCCAGGATGCTCTGGGCAGCTGCATCGACATCAATGAGTGTCTGGCCCAGACTGGGCCTTGCCACCCTGGCCAGTCGTGTATGAACACGGTGGGCTCCTTCACCTGCCAGAGGAACTCTGTCAACTGTGGCCGGGGATACCACCTAAACGACAACGGCAACCGCTGCGTGGATATTGATGAGTGTAAAGGTCCTGATGGAGAGTGTGCAGGCCATGGCTGTATCAACCTGGTAGGATCGTTCCGTTGTGAGTGTAAGATTGGCTTCATCTTCAACAGCATCAGCCGCGTATGCGAAGATATCAATGAGTGCAGGCACTACCCTGGGCGCCTCTGTGCCCACAAGTGTGAGAATGCCGTGGGGTCCTATAAGTGCAGCTGCACCCAAGGCTTCAAGCTGGCCAGCGACGGCAGGAACTGTGATGATCTAAACGAATGTGAGAGCAGCCCTTGCAGTCAAGAGTGTGCCAACGTGTACGGCTCCTACCAGTGCTACTGTCGCCGTGGCTACCAGCTCAGTGACAGGGATGGCATCAACTGTGAAGACATTGATGAGTGTGCCTTGCCCACCGGGGGTCACATCTGTTCCTACCGCTGCCACAACACCCCCGGGAGCTTCCACTGCAACTGCCCCGCCACCGGCTATACTCTGGCCCCCAATGGACGCAGCTGCCAGGATGTTGATGAGTGTGTGACAGGGACACACACCTGCTCTGAGACAGAGAGCTGCTTCAATGTACAGGGTGGATTCAGATGCTTGTCCTTTGAGTGTCCGCCAAACTATCGCCGAGCAGGAGAGAAGGCAAGGGTCGAGCGCTCAGACACCGTCCGCTGTGTGAAGTCGTGCCAGCCCAATGACATCAGCTGTGTCCTGGACCCTGTACACTCAGTCTCCCACACTGTCATCTCCATGCCTACCTTCAGGGAGTTCACCAGGCCTGAAGAGATAGTTTTCCTGAGAACCATGTCGATGGCGCACTCCTCCCCCCACATCAGCTCCGACATCGTGTTCGACATCCTGGAGGGAAATGTCCAGAATTCCTTCGACATCGTCAAACGTGAGGAGCACGGCATAATCGTGGGTGTGGTCCGACAAGTGAAGCCTCTGATTGGCCCGCTGAACATGGTATTGAAGCTGGCTATGAACTACGTCACCTCTGGGGTGGTGTCTCATCGGAACATCGTCAGCGTCCACATCTTCGTCTCCGAGTTCTGGTTCTGAGTACAggacacacaccaacaccaccTCACATAGCCATACTGTTCTACCACAGTACTACCAACACCACCTCACATAGCCATACTGTTCTACCACAgtactaccaacaccaccacacaTAGCCATACTGTTCTACCACAGTACTACGAACACCACCACACATAGCCATACAGTTCTACCACAGTACTACCAACACCATCACACATAGCCATACAGTTCTACCACAgtactaccaacaccaccacacaTAGCCACACAGGTCTACCACAGTACTaccaacaccaacacacataGCCATACAGTTCTACCACAgtactaccaacaccaccacacaTAGCCATAAAGTATTTCCACTTACACACTACTACCACACAGTACAACCACAGTCCTATAACTTTACCCTCCTAGCATGAAGAGAAAGGAGATTGCTGAGTGCATGGAGGAGAAAATGAAGATTATTTAGGTGTATAACTAAAAGGATATGAATATCATTGGAGGGTCCAATAAAGGGATATCCTGATACAACCAACACACATTTTAATAACTTTAGTTAACTTTCATTCCTTTTCGATGAAGATAAACAGACCACTAGCTGCTTAGTTGCTTTTGTTATTGTATGAAACTAAAGCACTTCCCAGTAAGTTTACCTGTAATATAAGTAGATGTAACAAGCCAAGCCATGAGTGGATGCATGCATCTGACCTACGGAACTTGACGTGAAGACTCATTAACTGTATCATATAATGTAAGCATGCTGTCATGCCCAAGACTATAGAATGTGATTGTGAATTGAAAGTGCATGCGTAGACATGGAGATGTGAAAAGCCATTGGAGGATTCAACAGTTGAATGTAACACTAACCCTTGAGTAATGATGTGTATTACATTTCATTATCTTACTGTATACATTGCGAAAGGTGTTTCGGTACTAAATAAACcgtcttgttttta

Function

NR:

description
fibulin-1-like isoform X1

GO:

id name namespace
GO:0005576 extracellular region cellular_component
GO:0005509 calcium ion binding molecular_function

KEGG:

id description
K17307 FBLN1_2; fibulin 1/2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036968912.1 False 2621 mRNA 0.53 15 14383407 14400203
XM_036968911.1 True 3220 mRNA 0.51 17 14383407 14427519

Neighbor

gene id symbol gene type direction distance location
LOC110521390 LOC106584497 coding upstream 1973 14370026 ~ 14381434 (+)
LOC110521387 LOC106584502 coding upstream 153304 14191124 ~ 14230103 (+)
LOC110521386 LOC106584503 coding upstream 218588 14155509 ~ 14164819 (+)
fnbp4 LOC106584504 coding upstream 352307 14011108 ~ 14031100 (+)
lrrc10 LOC106584482 coding upstream 375296 14005458 ~ 14008111 (+)
LOC118945780 NA coding downstream 333609 14761128 ~ 14772721 (+)
LOC110521393 LOC106584489 coding downstream 353391 14780910 ~ 14848042 (+)
LOC110521396 yars2 coding downstream 427830 14855349 ~ 14862158 (+)
cdkn1bb LOC106584490 coding downstream 434644 14862163 ~ 14868180 (+)
LOC110521404 LOC106560988 coding downstream 738758 15166277 ~ 15181233 (+)
G2203462 LOC100194703 non-coding upstream 16557 14366542 ~ 14366850 (+)
G2203461 NA non-coding upstream 18297 14364569 ~ 14365110 (+)
G2203310 NA non-coding upstream 23724 14357577 ~ 14359683 (+)
G2203280 NA non-coding upstream 72659 14309528 ~ 14310748 (+)
G2203250 NA non-coding upstream 118188 14261921 ~ 14265219 (+)
G2203531 NA non-coding downstream 40329 14467848 ~ 14475788 (+)
G2203532 NA non-coding downstream 45180 14472699 ~ 14479096 (+)
G2203609 LOC106582599 non-coding downstream 56792 14484311 ~ 14484515 (+)
G2203610 LOC100136012 non-coding downstream 57920 14485439 ~ 14485829 (+)
G2203611 NA non-coding downstream 58621 14486140 ~ 14486459 (+)
tnnt3a LOC100136357 other upstream 921220 13435735 ~ 13462187 (+)
LOC110521355 LOC106584515 other upstream 1088247 13292190 ~ 13301806 (+)
G2202196 NA other upstream 1181916 13201138 ~ 13201491 (+)
LOC110521323 LOC106561036 other upstream 2586472 11683849 ~ 11796935 (+)
G2198837 NA other upstream 3238735 11144213 ~ 11144672 (+)
G2203653 NA other downstream 131928 14559447 ~ 14567103 (+)
G2203973 NA other downstream 844526 15272045 ~ 15273733 (+)
G2205546 NA other downstream 1802652 16230171 ~ 16232396 (+)
G2206179 NA other downstream 2736118 17163637 ~ 17164159 (+)
G2206268 LOC106584433 other downstream 2747898 17175417 ~ 17175872 (+)

Expression


Co-expression Network