LOC110520943


Basic Information

Item Value
gene id LOC110520943
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050570.1
NCBI id CM025857.1
chromosome length 46327593
location 14432004 ~ 14433690 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_002473057.2
CATTAACCAAACAAGGGAGATTGGCAGCGTAAAtccctcagccctcgtttttgaTCGAGAGGGCGAGTGTACTATTCTGTTCCCTCCGGGGCTGAAACGGCCTGTAATTCAATTTGCAatgattgtacatccgctaagaaaagtcagccAAAACTTAATACCAACATCAAGAAATCAACATACAAGTGACAATTGTTCAGAGGATGGTGCTGGAGGGAAGGCTCACAGGTGGGCAGGCCTCAAAGAAGTGGGAGAATGTAAAGAATAAGTACAAGGTCCCTCCAACTCAGCAGCAACAGAGGTAGAGCAGCCCCCCCTGGCCCTCCACCCCAGGCCCCAGGGAGATCCCAGCAAACCCTCCCCATCTACCCCAGTGCAGCACGACAAAGCATCAGATGATGCAGACAGCCCCAGCACCTCAACCTCCAAGCACGGAGACCACATAATGTACACCATTACGGTTAGGGAGAGTGAAAAGGATGAAGCCAGGTTCGCATGCCAGGAGCCCAAACAGAGAGGCTCATAGGTGTcatgtaatgtaaagtgttggtcccatgtttcatgagctgaaataaaagatcccagaaatgtt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_002473057.2 True 592 mRNA 0.50 3 14432004 14433690
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110521389 LOC106584498 coding downstream 72720 14301881 ~ 14359576 (-)
LOC110522742 LOC106584500 coding downstream 132917 14241171 ~ 14299087 (-)
cnot2 NA coding downstream 440634 13982925 ~ 13991370 (-)
slc41a2a slc41a2 coding downstream 478699 13939537 ~ 13953305 (-)
nfybb nfyb coding downstream 493371 13916667 ~ 13938633 (-)
LOC110517476 LOC106584495 coding upstream 128207 14561897 ~ 14617511 (-)
LOC110521392 NA coding upstream 311111 14740548 ~ 14746591 (-)
LOC110522744 LOC106584451 coding upstream 451146 14884836 ~ 15161793 (-)
LOC110521403 LOC106584461 coding upstream 749536 15183226 ~ 15196179 (-)
LOC110522745 NA coding upstream 809099 15242789 ~ 15245065 (-)
G2203573 NA non-coding downstream 4495 14426440 ~ 14427509 (-)
G2203447 NA non-coding downstream 76881 14351795 ~ 14355123 (-)
G2203445 NA non-coding downstream 81164 14350622 ~ 14350840 (-)
G2203417 NA non-coding downstream 147635 14283613 ~ 14284369 (-)
G2203604 NA non-coding upstream 40739 14474429 ~ 14475703 (-)
G2204111 NA non-coding upstream 53030 14486720 ~ 14488432 (-)
G2204133 NA non-coding upstream 101263 14534953 ~ 14535316 (-)
G2204147 NA non-coding upstream 118599 14552289 ~ 14552537 (-)
G2204148 NA non-coding upstream 119049 14552739 ~ 14553286 (-)
G2203363 LOC106613263 other downstream 187542 14174441 ~ 14244462 (-)
G2203060 NA other downstream 419492 14011153 ~ 14012512 (-)
si:ch211-106e7.2 LOC106584539 other downstream 534306 13862396 ~ 13897713 (-)
urahb urah other downstream 761024 13666900 ~ 13671199 (-)
LOC110521347 LOC106584546 other downstream 1333701 13094306 ~ 13103545 (-)
G2204129 NA other upstream 91274 14524964 ~ 14525468 (-)
G2204181 NA other upstream 193404 14627094 ~ 14629178 (-)
G2204315 NA other upstream 457245 14890935 ~ 14893501 (-)
LOC110521406 dennd2a other upstream 911333 15322978 ~ 15376606 (-)
G2205496 NA other upstream 1716443 16150133 ~ 16150537 (-)

Expression

LOC110520943 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 2.
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LOC110520943 Expression in each Bioproject

Bar chart with 15 bars.
LOC110520943 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 20.
End of interactive chart.

Co-expression Network