Item | Value |
---|---|
gene id | LOC110521425 |
gene name | LOC106584443 |
gene type | coding |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_050570.1 |
NCBI id | CM025857.1 |
chromosome length | 46327593 |
location | 16499341 ~ 16853081 (-) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
description |
---|
PREDICTED: CUGBP Elav-like family member 5 isoform X13 |
id | description |
---|---|
K13207 | CUGBP, BRUNOL, CELF; CUG-BP- and ETR3-like factor |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XM_036968443.1 | False | 5877 | mRNA | 0.43 | 12 | 16499341 | 16853018 |
XM_036968432.1 | False | 5997 | mRNA | 0.43 | 13 | 16499341 | 16853081 |
XM_036968433.1 | False | 5994 | mRNA | 0.43 | 13 | 16499341 | 16853081 |
XM_036968434.1 | False | 5994 | mRNA | 0.43 | 13 | 16499341 | 16853081 |
XM_036968435.1 | False | 5991 | mRNA | 0.43 | 13 | 16499341 | 16853081 |
XM_036968436.1 | False | 5988 | mRNA | 0.43 | 13 | 16499341 | 16853081 |
XM_036968437.1 | False | 5973 | mRNA | 0.43 | 12 | 16499341 | 16853081 |
XM_036968438.1 | False | 5970 | mRNA | 0.43 | 13 | 16499341 | 16853081 |
XM_036968439.1 | False | 5967 | mRNA | 0.43 | 13 | 16499341 | 16853081 |
XM_036968440.1 | False | 5967 | mRNA | 0.43 | 13 | 16499341 | 16853081 |
XM_036968441.1 | False | 5946 | mRNA | 0.43 | 12 | 16499341 | 16853081 |
XM_036968442.1 | False | 5943 | mRNA | 0.43 | 12 | 16499341 | 16853081 |
XM_036968444.1 | True | 5937 | mRNA | 0.43 | 12 | 16499341 | 16853081 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC110521421 | LOC106584447 | coding | downstream | 119637 | 16377972 ~ 16379704 (-) |
LOC110521417 | LOC106584450 | coding | downstream | 229980 | 16231902 ~ 16269361 (-) |
trnat-ugu-42 | NA | coding | downstream | 256680 | 16242589 ~ 16242661 (-) |
LOC110520945 | LOC106584459 | coding | downstream | 278587 | 16212877 ~ 16220754 (-) |
LOC110521416 | LOC106584478 | coding | downstream | 323796 | 16137720 ~ 16175545 (-) |
LOC110521426 | LOC106584262 | coding | upstream | 78803 | 16929175 ~ 16934331 (-) |
LOC110521427 | LOC106584441 | coding | upstream | 84314 | 16937395 ~ 16955875 (-) |
LOC110521433 | NA | coding | upstream | 229953 | 17083034 ~ 17088817 (-) |
LOC110522751 | NA | coding | upstream | 236436 | 17089517 ~ 17097171 (-) |
LOC110521432 | LOC106584436 | coding | upstream | 240765 | 17093846 ~ 17107514 (-) |
G2205871 | NA | non-coding | downstream | 28198 | 16470932 ~ 16471143 (-) |
G2205870 | NA | non-coding | downstream | 29382 | 16469706 ~ 16469959 (-) |
G2205804 | NA | non-coding | downstream | 126656 | 16372338 ~ 16372685 (-) |
G2205799 | NA | non-coding | downstream | 131113 | 16365193 ~ 16368228 (-) |
G2205786 | NA | non-coding | downstream | 153069 | 16345684 ~ 16346272 (-) |
G2206653 | NA | non-coding | upstream | 4373 | 16857454 ~ 16866966 (-) |
G2206699 | NA | non-coding | upstream | 69996 | 16923077 ~ 16923355 (-) |
G2206700 | NA | non-coding | upstream | 71016 | 16924097 ~ 16924304 (-) |
G2206708 | NA | non-coding | upstream | 106141 | 16959222 ~ 16959566 (-) |
G2205743 | LOC100194703 | other | downstream | 215409 | 16283488 ~ 16283932 (-) |
G2205496 | NA | other | downstream | 348804 | 16150133 ~ 16150537 (-) |
LOC110521406 | dennd2a | other | downstream | 1122915 | 15322978 ~ 15376606 (-) |
G2204315 | NA | other | downstream | 1605840 | 14890935 ~ 14893501 (-) |
G2206739 | NA | other | upstream | 170351 | 17023432 ~ 17024351 (-) |
G2206890 | NA | other | upstream | 493736 | 17346817 ~ 17347569 (-) |
G2207736 | NA | other | upstream | 629288 | 17482369 ~ 17500307 (-) |
G2208092 | NA | other | upstream | 1332434 | 18185515 ~ 18185985 (-) |
G2208093 | NA | other | upstream | 1334044 | 18187125 ~ 18187525 (-) |