Item | Value |
---|---|
gene id | LOC110521465 |
gene name | LOC107586405 |
gene type | coding |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_050570.1 |
NCBI id | CM025857.1 |
chromosome length | 46327593 |
location | 18472760 ~ 18543124 (-) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
description |
---|
guanine nucleotide-binding protein subunit alpha-11-like isoform X1 |
id | description |
---|---|
K04635 | GNA11; guanine nucleotide-binding protein subunit alpha-11 |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XM_021599032.2 | False | 6957 | mRNA | 0.41 | 9 | 18472760 | 18543107 |
XM_036969508.1 | False | 6946 | mRNA | 0.41 | 8 | 18472760 | 18543108 |
XM_036969506.1 | False | 7524 | mRNA | 0.42 | 8 | 18472760 | 18543122 |
XM_036969507.1 | False | 7130 | mRNA | 0.42 | 9 | 18472760 | 18543122 |
XM_036969500.1 | False | 7102 | mRNA | 0.42 | 10 | 18472760 | 18543123 |
XM_036969501.1 | False | 6708 | mRNA | 0.42 | 11 | 18472760 | 18543123 |
XM_036969502.1 | False | 6623 | mRNA | 0.42 | 10 | 18472760 | 18543123 |
XM_036969503.1 | False | 7090 | mRNA | 0.42 | 9 | 18472760 | 18543123 |
XM_036969504.1 | False | 6696 | mRNA | 0.42 | 10 | 18472760 | 18543123 |
XM_036969505.1 | False | 6611 | mRNA | 0.42 | 9 | 18472760 | 18543123 |
XM_036969509.1 | False | 7359 | mRNA | 0.42 | 9 | 18472760 | 18543123 |
XM_036969510.1 | False | 7106 | mRNA | 0.42 | 10 | 18472760 | 18543123 |
XM_036969511.1 | False | 6627 | mRNA | 0.42 | 10 | 18472760 | 18543123 |
XM_036969512.1 | True | 6526 | mRNA | 0.41 | 9 | 18472760 | 18543124 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC110521466 | LOC106584407 | coding | downstream | 267 | 18431183 ~ 18472493 (-) |
LOC110521464 | LOC106584409 | coding | downstream | 80205 | 18306119 ~ 18392555 (-) |
trnaq-uug-130 | NA | coding | downstream | 217705 | 18254984 ~ 18255055 (-) |
s1pr3a | LOC106584412 | coding | downstream | 401340 | 18066927 ~ 18071420 (-) |
LOC110521456 | LOC106584414 | coding | downstream | 462129 | 17960092 ~ 18010631 (-) |
LOC110521468 | LOC106584260 | coding | upstream | 124194 | 18667318 ~ 18674679 (-) |
LOC110521470 | LOC106584404 | coding | upstream | 139137 | 18682261 ~ 18719083 (-) |
LOC110521469 | LOC106584401 | coding | upstream | 176641 | 18719765 ~ 18756168 (-) |
LOC110521471 | LOC106584403 | coding | upstream | 215123 | 18758247 ~ 18767416 (-) |
LOC110521472 | LOC106584399 | coding | upstream | 238408 | 18781532 ~ 18798656 (-) |
G2208228 | NA | non-coding | downstream | 62626 | 18408080 ~ 18410134 (-) |
G2208096 | NA | non-coding | downstream | 277306 | 18195230 ~ 18195454 (-) |
G2208088 | NA | non-coding | downstream | 292608 | 18179934 ~ 18180152 (-) |
cks2 | LOC106584418 | non-coding | downstream | 546066 | 17924927 ~ 17926809 (-) |
G2208363 | NA | non-coding | upstream | 118740 | 18661864 ~ 18662219 (-) |
G2208554 | NA | non-coding | upstream | 122563 | 18665687 ~ 18666243 (-) |
G2208589 | NA | non-coding | upstream | 224587 | 18767711 ~ 18767940 (-) |
G2208610 | NA | non-coding | upstream | 256034 | 18799158 ~ 18799358 (-) |
G2208625 | NA | non-coding | upstream | 309214 | 18852338 ~ 18852983 (-) |
G2208093 | NA | other | downstream | 285235 | 18187125 ~ 18187525 (-) |
G2208092 | NA | other | downstream | 286775 | 18185515 ~ 18185985 (-) |
G2207736 | NA | other | downstream | 972453 | 17482369 ~ 17500307 (-) |
G2206890 | NA | other | downstream | 1125191 | 17346817 ~ 17347569 (-) |
LOC110521505 | LOC106584372 | other | upstream | 1530365 | 20067742 ~ 20083690 (-) |
LOC110521508 | LOC106584371 | other | upstream | 1591012 | 20129636 ~ 20197258 (-) |
G2210769 | NA | other | upstream | 1975216 | 20518340 ~ 20523111 (-) |
G2211274 | ttc14 | other | upstream | 2761717 | 21304841 ~ 21306542 (-) |
G2212755 | NA | other | upstream | 3122840 | 21665964 ~ 21666615 (-) |