Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110522759 |
| gene name | LOC106584378 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_050570.1 |
| NCBI id | CM025857.1 |
| chromosome length | 46327593 |
| location | 19549362 ~ 19554065 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| protein FAM78B |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_036969039.1 | True | 3483 | mRNA | 0.47 | 2 | 19549362 | 19554065 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110521491 | LOC106584382 | coding | downstream | 166407 | 19357167 ~ 19382955 (-) |
| LOC110521490 | LOC106584383 | coding | downstream | 196292 | 19335323 ~ 19353070 (-) |
| LOC110521489 | LOC106584384 | coding | downstream | 220358 | 19300075 ~ 19329004 (-) |
| LOC110521488 | LOC106584385 | coding | downstream | 260699 | 19283723 ~ 19288663 (-) |
| LOC110522757 | LOC106584386 | coding | downstream | 318540 | 19206553 ~ 19230822 (-) |
| LOC110521498 | LOC106584376 | coding | upstream | 166470 | 19720535 ~ 19826895 (-) |
| LOC110521500 | lpxn | coding | upstream | 303439 | 19857504 ~ 19865915 (-) |
| LOC110521502 | LOC106584375 | coding | upstream | 366495 | 19920560 ~ 19999174 (-) |
| LOC110521505 | LOC106584372 | coding | upstream | 513677 | 20067742 ~ 20083690 (-) |
| LOC110522761 | NA | coding | upstream | 532428 | 20086493 ~ 20089960 (-) |
| G2209337 | NA | non-coding | downstream | 8294 | 19540834 ~ 19541068 (-) |
| G2209334 | NA | non-coding | downstream | 21922 | 19527206 ~ 19527440 (-) |
| G2209332 | NA | non-coding | downstream | 22385 | 19526578 ~ 19526977 (-) |
| G2209331 | NA | non-coding | downstream | 23565 | 19525274 ~ 19525797 (-) |
| G2209328 | LOC106584380 | non-coding | downstream | 24586 | 19524470 ~ 19524776 (-) |
| G2209346 | NA | non-coding | upstream | 7162 | 19561227 ~ 19561453 (-) |
| G2209349 | NA | non-coding | upstream | 22357 | 19576422 ~ 19576646 (-) |
| G2209353 | NA | non-coding | upstream | 29205 | 19583270 ~ 19583498 (-) |
| G2209356 | LOC106584257 | non-coding | upstream | 31654 | 19585719 ~ 19586018 (-) |
| G2209342 | LOC106584377 | non-coding | upstream | 39330 | 19593395 ~ 19595675 (-) |
| LOC110521464 | LOC106584409 | other | downstream | 1225957 | 18306119 ~ 18392555 (-) |
| G2208093 | NA | other | downstream | 1361837 | 18187125 ~ 18187525 (-) |
| G2208092 | NA | other | downstream | 1363377 | 18185515 ~ 18185985 (-) |
| G2207736 | NA | other | downstream | 2049055 | 17482369 ~ 17500307 (-) |
| G2206890 | NA | other | downstream | 2201793 | 17346817 ~ 17347569 (-) |
| LOC110521508 | LOC106584371 | other | upstream | 580071 | 20129636 ~ 20197258 (-) |
| G2210769 | NA | other | upstream | 964275 | 20518340 ~ 20523111 (-) |
| G2211274 | ttc14 | other | upstream | 1750776 | 21304841 ~ 21306542 (-) |
| G2212755 | NA | other | upstream | 2111899 | 21665964 ~ 21666615 (-) |
