Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110521502 |
| gene name | LOC106584375 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_050570.1 |
| NCBI id | CM025857.1 |
| chromosome length | 46327593 |
| location | 19920560 ~ 19999174 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| DNA-binding protein RFX2-like isoform X2 |
| id | description |
|---|---|
| K09173 | RFX1_2_3; regulatory factor X 1/2/3 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_036968419.1 | False | 4762 | mRNA | 0.50 | 18 | 19920560 | 19999173 |
| XM_036968421.1 | False | 4687 | mRNA | 0.50 | 17 | 19920560 | 19999173 |
| XM_036968418.1 | False | 4826 | mRNA | 0.50 | 18 | 19920560 | 19999174 |
| XM_036968420.1 | True | 4751 | mRNA | 0.50 | 17 | 19920560 | 19999174 |
19,850,000
19,860,000
19,870,000
19,880,000
19,890,000
19,900,000
19,910,000
19,920,000
19,930,000
19,940,000
19,950,000
19,960,000
19,970,000
19,980,000
19,990,000
20,000,000
20,010,000
NC_050570.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110521500 | lpxn | coding | downstream | 54645 | 19857504 ~ 19865915 (-) |
| LOC110521498 | LOC106584376 | coding | downstream | 93665 | 19720535 ~ 19826895 (-) |
| LOC110522759 | LOC106584378 | coding | downstream | 366495 | 19549362 ~ 19554065 (-) |
| LOC110521491 | LOC106584382 | coding | downstream | 537605 | 19357167 ~ 19382955 (-) |
| LOC110521490 | LOC106584383 | coding | downstream | 567490 | 19335323 ~ 19353070 (-) |
| LOC110521505 | LOC106584372 | coding | upstream | 68568 | 20067742 ~ 20083690 (-) |
| LOC110522761 | NA | coding | upstream | 87319 | 20086493 ~ 20089960 (-) |
| LOC110521506 | LOC100380684 | coding | upstream | 92462 | 20091636 ~ 20118358 (-) |
| LOC110521508 | LOC106584371 | coding | upstream | 130462 | 20129636 ~ 20197258 (-) |
| LOC118945755 | NA | coding | upstream | 335396 | 20334570 ~ 20343931 (-) |
| G2210426 | NA | non-coding | downstream | 6190 | 19914154 ~ 19914370 (-) |
| G2210425 | NA | non-coding | downstream | 11600 | 19908639 ~ 19908960 (-) |
| G2210424 | NA | non-coding | downstream | 12709 | 19907403 ~ 19907851 (-) |
| G2210419 | NA | non-coding | downstream | 17927 | 19902431 ~ 19902633 (-) |
| G2210417 | NA | non-coding | downstream | 19129 | 19901038 ~ 19901431 (-) |
| G2210511 | NA | non-coding | upstream | 58820 | 20057994 ~ 20058218 (-) |
| G2210491 | NA | non-coding | upstream | 61647 | 20060821 ~ 20061671 (-) |
| G2210469 | NA | non-coding | upstream | 64227 | 20063401 ~ 20063844 (-) |
| G2210468 | NA | non-coding | upstream | 65948 | 20065122 ~ 20066104 (-) |
| G2210514 | NA | non-coding | upstream | 67737 | 20066911 ~ 20067163 (-) |
| LOC110521464 | LOC106584409 | other | downstream | 1597155 | 18306119 ~ 18392555 (-) |
| G2208093 | NA | other | downstream | 1733035 | 18187125 ~ 18187525 (-) |
| G2208092 | NA | other | downstream | 1734575 | 18185515 ~ 18185985 (-) |
| G2207736 | NA | other | downstream | 2420253 | 17482369 ~ 17500307 (-) |
| G2206890 | NA | other | downstream | 2572991 | 17346817 ~ 17347569 (-) |
| G2210769 | NA | other | upstream | 519166 | 20518340 ~ 20523111 (-) |
| G2211274 | ttc14 | other | upstream | 1305667 | 21304841 ~ 21306542 (-) |
| G2212755 | NA | other | upstream | 1666790 | 21665964 ~ 21666615 (-) |
