Item | Value |
---|---|
gene id | qsox1 |
gene name | LOC106584316 |
gene type | coding |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_050570.1 |
NCBI id | CM025857.1 |
chromosome length | 46327593 |
location | 23423134 ~ 23443763 (+) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XM_021599214.2 | False | 3718 | mRNA | 0.49 | 12 | 23423134 | 23443758 |
XM_036968993.1 | True | 3140 | mRNA | 0.50 | 12 | 23424484 | 23443763 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC110521574 | LOC106584317 | coding | upstream | 2998 | 23380347 ~ 23420136 (+) |
LOC110521563 | LOC106584328 | coding | upstream | 453477 | 22965102 ~ 22969657 (+) |
LOC110521559 | LOC106613894 | coding | upstream | 677308 | 22663268 ~ 22745826 (+) |
dnttip2 | LOC106584334 | coding | upstream | 1271418 | 22142796 ~ 22151716 (+) |
LOC110521555 | LOC106584335 | coding | upstream | 1281552 | 22127258 ~ 22141582 (+) |
LOC110521576 | LOC106584315 | coding | downstream | 6367 | 23450130 ~ 23472394 (+) |
LOC110521578 | LOC106584313 | coding | downstream | 66806 | 23510569 ~ 23610545 (+) |
LOC110521584 | LOC106584308 | coding | downstream | 226934 | 23670697 ~ 23743514 (+) |
LOC110521587 | LOC106584307 | coding | downstream | 301587 | 23745350 ~ 23770745 (+) |
LOC110521588 | LOC106584306 | coding | downstream | 451431 | 23895194 ~ 24233242 (+) |
G2213809 | NA | non-coding | upstream | 37033 | 23385807 ~ 23386101 (+) |
G2213798 | NA | non-coding | upstream | 44501 | 23378347 ~ 23378633 (+) |
G2213769 | NA | non-coding | upstream | 62597 | 23360271 ~ 23360537 (+) |
G2213757 | NA | non-coding | upstream | 70892 | 23351968 ~ 23352242 (+) |
G2212584 | NA | non-coding | upstream | 185697 | 23235950 ~ 23237437 (+) |
G2213838 | NA | non-coding | downstream | 31155 | 23474918 ~ 23475277 (+) |
G2213936 | NA | non-coding | downstream | 177879 | 23621642 ~ 23622135 (+) |
G2213953 | NA | non-coding | downstream | 198888 | 23642651 ~ 23643495 (+) |
G2213954 | NA | non-coding | downstream | 200857 | 23644620 ~ 23645087 (+) |
G2213751 | NA | other | upstream | 73917 | 23348999 ~ 23349217 (+) |
G2212563 | LOC106584318 | other | upstream | 212618 | 23208775 ~ 23210516 (+) |
G2212455 | LOC106584324 | other | upstream | 371276 | 23050488 ~ 23051858 (+) |
G2211556 | NA | other | upstream | 1759295 | 21659650 ~ 21663839 (+) |
LOC110521540 | LOC106584347 | other | upstream | 2137843 | 21273731 ~ 21290307 (+) |
G2216024 | LOC106584303 | other | downstream | 1587235 | 25030998 ~ 25174051 (+) |
G2216357 | NA | other | downstream | 1920489 | 25364252 ~ 25373610 (+) |
LOC110522768 | LOC106584287 | other | downstream | 2124077 | 25566527 ~ 25590680 (+) |
LOC110521611 | LOC106584283 | other | downstream | 2244328 | 25688091 ~ 25825503 (+) |