LOC110522766


Basic Information

Item Value
gene id LOC110522766
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050570.1
NCBI id CM025857.1
chromosome length 46327593
location 25208384 ~ 25219290 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>LOC110522766
ATGAGGCGAGCCAGCTCCCCAGCCAACCCAGAATCGGGATCCCCCACCGCCAAGAGGTCCAAGGTTGCCATGGCCATTTTCCTGCTGACCGGGCAGATGTTGGAGAGGGCTACAgctgtctgggagagaggagaggaagcgcTAGGTTTATACAAGAGGTTCAGGGCGGTCTTTGACCATCCACCGGAGGGCAAAGGAGAGCCTGAACAAATGGCGGTAGGGGCCACACACCTCTCTGCGGCAGAGCAACATCGCCAGAAACCACTGGGGCTGTGTTCCTATTGCAGCCAGGAGGGCCACCAGCTTCAGATGAGTCCACTAGGGCAGAGGGATGCCCCTGTGCCCATCATTCCATCcgccaggctctggagagggaacCCGCATCTACGTTCCCACGGGGTTAAGGGATCTGCTGTTGACCTGGGCGCACACATCCCTCGCCTCTGGACACCGGCTGCCGAGGCACTGATCCAGCAGATCTTCTGGCACTACGGCCTTCTGGAGGACATAGTCTCTGACGTGGCCCCCAATTCAAGTTGCGGgtatggtGTCAAATGGTGTGTTATTGATGAAGCAGCAATaatattttgtaaaaaaataattgaTGTAGACCACCCAAAACTGAAAACATATTTACAGTACCATTTCCATAATTATATCATTCTCCCACATGATTACCCGAATGCAGCACCTGTCTAACAGATCAATGAAGCATGGTTGTGAGGTCCTGATCAAATGGCCCTGTTCAACAGTCTCGAGGAGCTCTACATACATacaaaaatgttgtttttttttttttacaatttttgcACTAACACTCGCACTTTCCTCCTGGAGAAATCCCAAAGCACAGACGCAGTGGACCACCCAAAGGTGAGAAATATGACGACAGAAATGGAGGATGATGAAGAAATAATGTTACCAGATAACTGGGTTCTAAAGCTGAACACAGAGAGTGTACACCTTTTCGAGAATCACTCAATTGATGAGGAACTACCTCCTATTAAACAGGGGGGAATGATCACAGACAGACGCAGCACCTTCCAGCCACAACCACCCACTGTGGTAACACCTAGACAGCTGCTGTGCAGGGCAGGCCCTCACCTGTCTCACCCCTCTTGCTGACTATAACATATTCCTATTCTGTCACATCTCACAGTTAGGCTTGTGATCTACTTTCCTGAGAATATTCAAAAGACCATGCTAGACAATGCAACCTTGGTGGGAGACCGAAGTAGCTGTCAGTGTAGCTCAT

Function

NR:

description
PREDICTED: protein IMPACT isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
LOC110522766 True 1255 mRNA 0.50 11 25208384 25219290

Neighbor

gene id symbol gene type direction distance location
LOC110521595 LOC106584300 coding upstream 63438 25123708 ~ 25144946 (+)
LOC110521596 LOC106584302 coding upstream 84806 25120648 ~ 25123578 (+)
LOC110522765 pik3ca coding upstream 99816 25097302 ~ 25108568 (+)
LOC110521590 LOC106613930 coding upstream 139904 25051692 ~ 25068480 (+)
LOC118945828 NA coding upstream 405898 24793389 ~ 24802486 (+)
LOC110521597 LOC106584301 coding downstream 27099 25246389 ~ 25254013 (+)
LOC110522767 LOC106584297 coding downstream 49765 25269055 ~ 25271075 (+)
LOC110521600 NA coding downstream 78505 25297795 ~ 25299938 (+)
LOC110521603 LOC106584291 coding downstream 136859 25356149 ~ 25382798 (+)
LOC110521605 NA coding downstream 193023 25412311 ~ 25426874 (+)
G2216088 NA non-coding upstream 20536 25133633 ~ 25187848 (+)
G2216024 LOC106584303 non-coding upstream 34333 25030998 ~ 25174051 (+)
G2216096 NA non-coding upstream 54911 25153092 ~ 25153473 (+)
G2216073 NA non-coding upstream 67343 25114519 ~ 25141041 (+)
G2216314 LOC106584296 non-coding downstream 59444 25278734 ~ 25280330 (+)
G2216336 tgm1 non-coding downstream 95239 25314529 ~ 25377233 (+)
G2216348 rabggta non-coding downstream 120539 25339829 ~ 25341601 (+)
G2216355 NA non-coding downstream 131555 25350845 ~ 25355952 (+)
LOC110521578 LOC106584313 other upstream 1622804 23510569 ~ 23610545 (+)
G2213751 NA other upstream 1859167 23348999 ~ 23349217 (+)
G2212563 LOC106584318 other upstream 1997868 23208775 ~ 23210516 (+)
G2212455 LOC106584324 other upstream 2156526 23050488 ~ 23051858 (+)
G2216357 NA other downstream 144962 25364252 ~ 25373610 (+)
LOC110522768 LOC106584287 other downstream 348550 25566527 ~ 25590680 (+)
LOC110521611 LOC106584283 other downstream 468801 25688091 ~ 25825503 (+)
G2217159 LOC106584278 other downstream 907764 26127054 ~ 26133044 (+)
G2217442 NA other downstream 1388233 26607523 ~ 26607943 (+)

Expression


Co-expression Network