LOC110522767 (LOC106584297)


Basic Information

Item Value
gene id LOC110522767
gene name LOC106584297
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050570.1
NCBI id CM025857.1
chromosome length 46327593
location 25269055 ~ 25271075 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036968586.1
CCTTTGCGACGAGGGGATGTGTCCATCACAGATGACCCCAGCCAGCATGTCTTCACTGTGACCATGCAGAACCTACAGACTCAGGACACAGGGGAGTATGTGTGTGCTGTGGACAATGGAAGAAACAATGGAAGCCTCTCTGTCACTGACTGCTTCCCAGATGTGTCGGTGAGGAGCAACATGGTGTCTGGTAAGGAGGGGAACAGCACCACAGCCGAGTGTCTCTACAGTGACATCATGGATGACAGTGAGAAGATGTGGTGTTGGAACGGGAAACCTGCAGAGAACTGGAGCTCCTGCTTGACTGTAGAGGGAGAGCGGGCGTCTCAGGACCGCATGGATTTGATCATCAATACATGGAGTCGTACCTTCACTGTGACGATGAGACATCTGGAGATGAACGATAACGACTGGTACTGGTGCATAGCAGGAGACAAGCAGATCCCGGTGTACATCTCAGTCCTCAATGCATCTAACGCATCAATATCTCCTCCAACCATGAATCTGATTACTTTCCCTTTGGTCTTGACTCTGAGAGCAACGGAGGATGATAACTCAAGGGAGAGGTGA

Function

NR:

description
polymeric immunoglobulin receptor-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036968586.1 True 570 mRNA 0.51 3 25269055 25271075

Neighbor

gene id symbol gene type direction distance location
LOC110521597 LOC106584301 coding upstream 15042 25246389 ~ 25254013 (+)
LOC110522766 NA coding upstream 49765 25208384 ~ 25219290 (+)
LOC110521595 LOC106584300 coding upstream 124109 25123708 ~ 25144946 (+)
LOC110521596 LOC106584302 coding upstream 145477 25120648 ~ 25123578 (+)
LOC110522765 pik3ca coding upstream 160487 25097302 ~ 25108568 (+)
LOC110521600 NA coding downstream 26720 25297795 ~ 25299938 (+)
LOC110521603 LOC106584291 coding downstream 85074 25356149 ~ 25382798 (+)
LOC110521605 NA coding downstream 141238 25412311 ~ 25426874 (+)
rpf1 rpf1 coding downstream 260574 25531649 ~ 25540983 (+)
LOC110522768 LOC106584287 coding downstream 295452 25566527 ~ 25590680 (+)
G2216088 NA non-coding upstream 81207 25133633 ~ 25187848 (+)
G2216024 LOC106584303 non-coding upstream 95004 25030998 ~ 25174051 (+)
G2216096 NA non-coding upstream 115582 25153092 ~ 25153473 (+)
G2216073 NA non-coding upstream 128014 25114519 ~ 25141041 (+)
G2216314 LOC106584296 non-coding downstream 7659 25278734 ~ 25280330 (+)
G2216336 tgm1 non-coding downstream 43454 25314529 ~ 25377233 (+)
G2216348 rabggta non-coding downstream 68754 25339829 ~ 25341601 (+)
G2216355 NA non-coding downstream 79770 25350845 ~ 25355952 (+)
LOC110521578 LOC106584313 other upstream 1683475 23510569 ~ 23610545 (+)
G2213751 NA other upstream 1919838 23348999 ~ 23349217 (+)
G2212563 LOC106584318 other upstream 2058539 23208775 ~ 23210516 (+)
G2212455 LOC106584324 other upstream 2217197 23050488 ~ 23051858 (+)
G2216357 NA other downstream 93177 25364252 ~ 25373610 (+)
LOC110521611 LOC106584283 other downstream 417016 25688091 ~ 25825503 (+)
G2217159 LOC106584278 other downstream 855979 26127054 ~ 26133044 (+)
G2217442 NA other downstream 1336448 26607523 ~ 26607943 (+)

Expression


Co-expression Network