Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC118945901 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_050570.1 |
| NCBI id | CM025857.1 |
| chromosome length | 46327593 |
| location | 26298973 ~ 26299025 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_005041056.1 | True | 53 | mRNA | 0.40 | 1 | 26298973 | 26299025 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110521623 | vamp4 | coding | upstream | 16580 | 26257937 ~ 26282393 (+) |
| LOC110521622 | prrc2c | coding | upstream | 46880 | 26202239 ~ 26252093 (+) |
| LOC110521621 | LOC106584275 | coding | upstream | 106711 | 26173348 ~ 26192262 (+) |
| si:dkey-239i20.4 | LOC106584276 | coding | upstream | 128791 | 26155885 ~ 26170182 (+) |
| LOC110521618 | LOC106584277 | coding | upstream | 149171 | 26144149 ~ 26149802 (+) |
| LOC110521625 | mettl13 | coding | downstream | 13155 | 26312180 ~ 26314731 (+) |
| LOC110522769 | LOC106613976 | coding | downstream | 16949 | 26315974 ~ 26358491 (+) |
| LOC110521629 | LOC106584269 | coding | downstream | 147422 | 26446447 ~ 26457719 (+) |
| LOC110521630 | mysm1 | coding | downstream | 158780 | 26457805 ~ 26478401 (+) |
| oma1 | oma1 | coding | downstream | 178010 | 26477035 ~ 26501552 (+) |
| G2217047 | NA | non-coding | upstream | 381273 | 25916976 ~ 25917700 (+) |
| G2217031 | NA | non-coding | upstream | 399119 | 25899224 ~ 25899854 (+) |
| LOC110521610 | NA | non-coding | upstream | 611034 | 25682300 ~ 25687956 (+) |
| LOC110521605 | NA | non-coding | upstream | 872099 | 25412311 ~ 25426874 (+) |
| G2216355 | NA | non-coding | upstream | 943021 | 25350845 ~ 25355952 (+) |
| G2217277 | NA | non-coding | downstream | 19116 | 26318141 ~ 26324770 (+) |
| G2217304 | NA | non-coding | downstream | 74776 | 26373801 ~ 26398614 (+) |
| G2217315 | NA | non-coding | downstream | 91884 | 26390909 ~ 26391160 (+) |
| G2217476 | NA | non-coding | downstream | 372478 | 26671503 ~ 26671724 (+) |
| G2217159 | LOC106584278 | other | upstream | 165929 | 26127054 ~ 26133044 (+) |
| LOC110521611 | LOC106584283 | other | upstream | 486667 | 25688091 ~ 25825503 (+) |
| LOC110522768 | LOC106584287 | other | upstream | 710458 | 25566527 ~ 25590680 (+) |
| G2216357 | NA | other | upstream | 925363 | 25364252 ~ 25373610 (+) |
| G2216024 | LOC106584303 | other | upstream | 1185375 | 25030998 ~ 25174051 (+) |
| G2217442 | NA | other | downstream | 308498 | 26607523 ~ 26607943 (+) |
| LOC110521633 | LOC106584207 | other | downstream | 422960 | 26695809 ~ 26795605 (+) |
| G2218483 | NA | other | downstream | 926349 | 27225374 ~ 27226305 (+) |
| LOC110521646 | LOC106584219 | other | downstream | 1198852 | 27497328 ~ 27519290 (+) |
| LOC110521656 | LOC106584103 | other | downstream | 1538883 | 27823914 ~ 27844041 (+) |
