dhcr24 (dhcr24)


Basic Information

Item Value
gene id dhcr24
gene name dhcr24
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050570.1
NCBI id CM025857.1
chromosome length 46327593
location 27099817 ~ 27122682 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021599325.2
AGCCGACCACCCAGCCAGACTCGCATATCAGAGAGAACGACAGGAGTGGCTGGATTCTAACTTCAAAATTTACACACCTATCTATGTGTTTAAATGTGTGTGAATttatgtgtgtgcacgtgttgGCATAAACAATCTGTGTTGGTTTTTAAAAGCAGAAGCTTTTTAATCTTGCATCGCTCGTTCCCAACTAAAGGTCATAGAAGATCGATTGTTCCTAGAAGGGATTTTCTCTCTGGAAAAGTCCCATTGGACCATCATCAGGCCAAGTAGACCAACAGAGCGGTAAAAATGGATCCGTTGCTGTATCTTGGTGGACTGGTAGTACTATTTCTGTTGTGGATCAAGGTGAAAGGCTTAGACTACGTGATCGTTCATCAGAGATGGATATTCGTCTGTCTGTTTCTGCTGCCGCTCTCAGCCATATTTGATGTGTATTATTACCTGCGCGCGTGGCTCATCTTCAAGATGTGTTCCGCGCCTAAACAGCACGACGAGCGTGTACGGAACATCCAGAGACAAgTGCGCGAatggaggaaggagggggggaaaACCCACATGTGTACAGGTCGTCCAGGCTggctgactgtctctctcagagTGGGGAAATACAAGAAGACCAATAAGAACATCATGATCAACATGATGGACATACTGGAGgtggacacacagagacagGTGGTTCGTGTGGAGCCCctggtcaacatgggccagataACTGCTCTCCTCAACTCCCTGGGCTGGACTCTGCCTGTGCTGCCAGAACTGGACGACCTCACTGTCGgaggtctTGTGATGGGTACAGGTATTGAGTCGTCCTCTCATATCTATGGACTCTTCCAGCACATCTGTGTTGCCTTTGAGCTGGTGCTGGCTGATGGCAGCCTGGTCCGCTGTACTGAGGAGGAGAATTCTGACCTGTTCCACGCGGTCCCTTGGTCCTGTGGAACTCTGGGGTTCCTGGTTGCCGCAGAAATAAAGATTGTCCCTGCGAGGTTGTGGGTTCGTTTGCAGTATGAGCCAATCAGAGGGCTGGAGAACATCTGCCGTCGGTTCAGTGAGGCGTCTGAGGACAAGAACAACACATTTGTAGAAGGACTGCAGTACTCACTGGATGAAGCTGTTATCATGACTGGCACTATGACTGACACCGCTGAACCCGAcaagatcaACCGGATCGGCCTGCACTATAAGCCTTGGTTCTTCAAGCACGTTGAGAGATACTTGACAGAGAACAAGAAAGCAGTAGAGTACATCCCTCTTCGCCACtactaccacagacacacacgatCCATCTTCTGGGAgctccagGACATCATCCCGTTTGGTAACCACCCAGTGTTCCGGTGGTTGTTTGGCTGGATGGTTCCTCCTAAGATCTCTCTGTTGAAGCTGACCCAGGGAGAGACCATCAGACAGCTGTATGAGCAGCACCATGTTGTCCAGGACATGCTGGTCCCCATGAAACACATCCAGACAGCTATCGCACGCTTCCACCAGGACATCCACGTGTACCCTCTGTGGTTGTGTCCGTTCATGCTCCCCCCGGGCCGGGGGATGGTTCATCCTAAAGGTGAAGAGGCAGAGCTGTATGTGGACATCGGAGCGTATGGAGAACCCGGAGTTAAACACTTCCAGGCTAAAGCCTCGTGTAGACAGCTGGAGCAGTTTGTCAGAGAGGTTCACGGgttCCAGATGCTGTATGCTGATGTGTACATGGAGCGCAGTGAGTTCTGGGAGATGTTTGACGGGACGTTGTATCACCGTCTGAGGAAGGAGCTTGGCTGTCAGGACGCTTTCCCCGAGGTCTACGACAAGATCTGCAAAGCTGCACGacactgacctctaacctctgatcCTTTCAACTCTGCCATCCCACCAGCAACAATATGAAGATGAGAGCCTTTAAGGAGTGTTTGCACCATGTTCTCATCCTGTTTGTATGGTTAATTCCACTGAATGTGAATGTGCTGATGAAGCAAACACAGCCCTAACACTTGCCTGTTTTGAtgtctaacctctgacccctaaccccaacaccagcCTCTAGCTCATAACCCTAGGAGAGACCTGTGCTGTCATTTGTTTGTTTTAACATTCCTTAATTTGACTATCATGGGGTATATTTCCTTAGTTCAAATGACTGGACATCTTACAGACTGTGGCTTTAATGATGTAATGCCCTCTGCCTGTTATACAACACATATCCAGTCTGCTCTTCCGTCATGTGTTTAGAATCTATCCTGACATATGGAGCATGTTTCTTTGTGTCCACTGTGATCACATCACTCCGCCTTAAACTCATCTGATGATTATTGGTTCGCACGTCATCTGTAGTGTTTAATCAATCACATTTTCCTCTGGCTTGTGGAAGAACAGTCACCTGTTCTcagtccgtgtgtgtgtgcgtgttcagaGAGAAAGGACGTCACTGCTTTTGTCCACATAAATGTTTTTGTTGATGTATgataataaagtttgatttgtcaACAGTAAA

Function

symbol description
dhcr24 Predicted to enable delta24(24-1) sterol reductase activity. Predicted to be involved in steroid metabolic process. Predicted to be integral component of membrane. Predicted to be active in cytoplasm and membrane. Is expressed in cranial ganglion; lens; solid lens vesicle; telencephalon; and yolk syncytial layer. Human ortholog(s) of this gene implicated in lipid metabolism disorder. Orthologous to human DHCR24 (24-dehydrocholesterol reductase).

NR:

description
delta(24)-sterol reductase

GO:

id name namespace
GO:0055114 oxidation-reduction process biological_process
GO:0008762 UDP-N-acetylmuramate dehydrogenase activity molecular_function
GO:0050660 flavin adenine dinucleotide binding molecular_function

KEGG:

id description
K09828 DHCR24, DWF1; Delta24-sterol reductase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021599325.2 True 2497 mRNA 0.48 9 27099817 27122682

Neighbor

gene id symbol gene type direction distance location
usp24 usp24 coding upstream 23073 27023938 ~ 27076744 (+)
plpp3 plpp3 coding upstream 193399 26847423 ~ 26906418 (+)
LOC110521632 LOC106584206 coding upstream 277485 26796202 ~ 26822332 (+)
LOC110521633 LOC106584207 coding upstream 304212 26695809 ~ 26795605 (+)
oma1 oma1 coding upstream 598265 26477035 ~ 26501552 (+)
LOC110521639 tmm27 coding downstream 20323 27143005 ~ 27145888 (+)
LOC110522772 NA coding downstream 24670 27147352 ~ 27156672 (+)
LOC110521646 LOC106584219 coding downstream 374646 27497328 ~ 27519290 (+)
LOC110521647 LOC106560251 coding downstream 398923 27521605 ~ 27537511 (+)
LOC110522774 NA coding downstream 417338 27540020 ~ 27540985 (+)
G2218192 NA non-coding upstream 127249 26972265 ~ 26972568 (+)
G2217601 NA non-coding upstream 133672 26965652 ~ 26966145 (+)
G2217600 NA non-coding upstream 134913 26964686 ~ 26964904 (+)
G2217598 NA non-coding upstream 136050 26963475 ~ 26963767 (+)
G2218316 LOC106584215 non-coding downstream 63893 27186575 ~ 27196779 (+)
G2218332 NA non-coding downstream 87979 27210661 ~ 27210860 (+)
G2218482 NA non-coding downstream 100188 27222870 ~ 27225123 (+)
G2218484 NA non-coding downstream 103681 27226363 ~ 27227059 (+)
G2218507 NA non-coding downstream 120910 27243592 ~ 27243792 (+)
G2217442 NA other upstream 491874 26607523 ~ 26607943 (+)
G2217159 LOC106584278 other upstream 966773 26127054 ~ 26133044 (+)
LOC110521611 LOC106584283 other upstream 1287511 25688091 ~ 25825503 (+)
LOC110522768 LOC106584287 other upstream 1511302 25566527 ~ 25590680 (+)
G2218483 NA other downstream 102692 27225374 ~ 27226305 (+)
LOC110521656 LOC106584103 other downstream 715226 27823914 ~ 27844041 (+)
fip1l1a fip1l1 other downstream 1171213 28260830 ~ 28307538 (+)
G2219989 LOC105940532 other downstream 1424856 28547538 ~ 28548084 (+)

Expression


Co-expression Network