LOC110521654 (cbr4)


Basic Information

Item Value
gene id LOC110521654
gene name cbr4
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050570.1
NCBI id CM025857.1
chromosome length 46327593
location 27672920 ~ 27685270 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021599355.2
TGCCCCCCCATGTGGTCGAATTAATAACCGCACTATAGGAAAAAATGGCGACCTCCATGTTTGTACGGTGTCAATGATCAACTAACGTTTGCACATGTTATTGTCAAAGGACCCGGATAGTCAAACGATAAGAATTATATGGAGCGAAATGCCAACTTGGTATCCATCTTAAACGACAACAGAGTTGCGTGAAAACGGCAGGGGCATGTCCAGgctatgtgtggtgtgtgggggCTCCAGGGGCATTGGCAGGGCTGTATCAAGGCTGCTGGCAGAGAGAGACTGCAGGGTTGCTGTGGTGTCCAGAAACCAGGATGCTGCTCAGGCCACTGTGGTGTCCCTCGCTGGAGCTGACCATATGGCCTTTAGTTGTGACGTCTCCAAAGGAGAGGAAGTTCAGAATATATTTGAGACGATCCAGAAGACCTGTGGAAACGTCTCATACCTGGTCAATGCAGCTGGTATCAACAGGGATGGTCTGTTGCTGAGGACCAGGCCCGAGGACATGGTGGCTCTGCTTCATACCAACCTACTGGGGAGCATGTTGACATGCAAGGCAGCGCTACGGAGCATGCTCCACACCCAGGGAGGGGCCATTGTCAACATAGgCTCTGTGGTGGGGTTGAAGGGGAACgcaggtcagtgtgtgtacagCGCCAGTAAAGCAGGTCTGGAGGGCTTCACTCGCTCCCTGGCCAAGGAGGTGGCCTCGCGCAATGTCAGAGTTAACCTGCTGGCTCCCGGTTTCATTCGAACAGACATGACAGTGGGGCTGAGGGAAGGGGAGGTGGTGCGGACCATCCCCCTGGGGAGGTTTGGGGAGCCTGAGGAGGTGGCCAAGGCTGTTATTTTCCTCCTGGAGTCTCCCTACATCACAGGACAGGTGCTGGTGGTGGACGGAGGGCTGCAGCTGGCCATGTAGGGAGGCCCTTGACCCCTCTATATACACCTAGTGCCCACTATACCTCCTAACACTGTCAGCTGGTTCCATGTTTCACGAACtgagatcccagaaatgttcaatttgcacaaaaagtgtatttctctcaaatgttgtgtggGCTTGACCTTGTAATAGTCAGGGCCAGAGATATTTATACCTGTGTATGGTTCATGTAATACTGTTGCCACTATCTGTACACAGTGCTGAGTCACAGGGTACTGCTCCACATAGCTCAGAGGGGGTGTGAGTGACAGTTTTTCATGACTAACACTGCTGactccactgtgtctgactcagtctgGCCCTCCACGCTCCTGAGGCCTTAACTTTGATCAGCAGATTTAATGCTATTACTCTTTCCATGACTTATAGGCACCTAGTGCTGACCAAAGCTCTCATGTTTCACTCTCCCACTCCCCTGGGGCACCGCGACACAGTGCAGGCCCCAACCGCCGCCCCCCCTTGAGCCCAGCCCTGGAGGGGCCCAGAGAGGGGGTATGGATGGGGTCTGACTGCCTGCCTACAGCTGGAGGGGATTTTTAGCCCATGGAATGTTTTGAGGGTCCAGTTACAGCTCAGGATCGGTGGTGCAAATGGATGGGGTCAGAGGTAACTGTCATGCTCAGTGTGGAGATTTGAAATGCTGTGATCTCATCTGTTATTTCCTCCAGTGGAGAGACATTTCACCTCACTGGAGTGTGCTGCCCagtcccctcacacacacagctccaggGTGCTCAACAGTCACATATAGCTTTCATAGATCTGGGGCATCTGCACTCATCTGCTGTCTATCATGTGACCTAAGATCAAGACAATGTAAACTAGGGATCAAGGTCAAATCTGATAAGAATTCTCAATAAAGAAAGGCATTTCCCCTGTGATGAA

Function

symbol description
cbr4 Predicted to enable 3-oxoacyl-[acyl-carrier-protein] reductase (NADH) activity and quinone binding activity. Predicted to be involved in fatty acid biosynthetic process and protein heterotetramerization. Predicted to act upstream of or within fatty acid metabolic process. Predicted to be located in mitochondrial matrix. Predicted to be part of oxidoreductase complex. Orthologous to human CBR4 (carbonyl reductase 4).

NR:

description
carbonyl reductase family member 4-like

GO:

id name namespace
GO:0055114 oxidation-reduction process biological_process
GO:0016491 oxidoreductase activity molecular_function

KEGG:

id description
K00059 fabG, OAR1; 3-oxoacyl-[acyl-carrier protein] reductase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021599355.2 True 1831 mRNA 0.52 6 27672920 27685270

Neighbor

gene id symbol gene type direction distance location
LOC110521651 LOC106584225 coding upstream 10572 27608444 ~ 27662348 (+)
LOC118945810 nek1 coding upstream 91060 27571714 ~ 27581860 (+)
LOC118945773 nek1 coding upstream 101534 27567817 ~ 27571386 (+)
LOC110522774 NA coding upstream 131935 27540020 ~ 27540985 (+)
LOC110521647 LOC106560251 coding upstream 135409 27521605 ~ 27537511 (+)
LOC110522775 NA coding downstream 116024 27801294 ~ 27822868 (+)
LOC110521656 LOC106584103 coding downstream 138644 27823914 ~ 27844041 (+)
LOC110521658 LOC106584105 coding downstream 166535 27851805 ~ 27855190 (+)
LOC100136720 zar1 coding downstream 170094 27855364 ~ 27856930 (+)
LOC110521659 LOC106584107 coding downstream 277637 27962907 ~ 27971343 (+)
G2218823 LOC106584220 non-coding upstream 107743 27563811 ~ 27565177 (+)
LOC110521646 LOC106584219 non-coding upstream 153630 27497328 ~ 27519290 (+)
G2218801 NA non-coding upstream 171761 27500303 ~ 27501159 (+)
G2218553 NA non-coding upstream 394471 27278240 ~ 27278449 (+)
G2218507 NA non-coding upstream 429128 27243592 ~ 27243792 (+)
G2218907 LOC106560254 non-coding downstream 5042 27690312 ~ 27692184 (+)
G2218953 NA non-coding downstream 62803 27748073 ~ 27754271 (+)
G2219002 NA non-coding downstream 124394 27809664 ~ 27810344 (+)
G2219003 NA non-coding downstream 126294 27811564 ~ 27811802 (+)
G2219005 NA non-coding downstream 130252 27815522 ~ 27815767 (+)
G2218483 NA other upstream 446615 27225374 ~ 27226305 (+)
LOC110521633 LOC106584207 other upstream 920456 26695809 ~ 26795605 (+)
G2217442 NA other upstream 1064977 26607523 ~ 26607943 (+)
G2217159 LOC106584278 other upstream 1539876 26127054 ~ 26133044 (+)
fip1l1a fip1l1 other downstream 608625 28260830 ~ 28307538 (+)
G2219989 LOC105940532 other downstream 862268 28547538 ~ 28548084 (+)
G2219991 NA other downstream 863759 28549029 ~ 28549478 (+)
G2220253 NA other downstream 1336316 29021586 ~ 29021882 (+)

Expression


Co-expression Network