LOC110521691 (LOC106584140)


Basic Information

Item Value
gene id LOC110521691
gene name LOC106584140
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050570.1
NCBI id CM025857.1
chromosome length 46327593
location 29284901 ~ 29303940 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021599467.2
GACTGCTGCTTCCGGGAACATGGCCGGCTAAACAATGACAAAAGTCTCTCTCCTCAAAATCAAGAAGAAACTTTTCGAAATGCAAACTGCTTGGCTTAACAAAAGTGTTTGGATTCAGTGCGTGCAATTAGGTCGTTTATTTGGTTTACATCTGCATGCATGTTGTTTAAGGTGATGTTTAAGTCGGACTAACTTGGCTATCTTGCCAGCGAAGGTAGCCAACTTTTCACATTCAGCAGAAttagcctaacgttagctagcaaatgcGAAGTGGCTTACATGTCAACATAGCTAGGAACATAAGTATTGCTATTGGCTGCTACACTTGAAGCCCGCAACTGATTTATTAAGTTCCACGATCGACACGTTGCAGTGCTGGCTTGTGTAACGTAGATGCGTTTGTTATTTTTATCGGGGTGTCTCGCTGGTTTATTGTTATGTTTTCGCAGCTGCGTACAGCTGTCTAGCTAGCTTGATTGACATTAATTTCAATGGCTCACTGTAGTTCAGATCCAAGTGGGAAGGTACCCCGTCCAGATAGCTTAGTGTTGATGGCAGGATCTCCTGGAAGCGTTGATCAGGCTATGAAGCCGGTGTTGTTTGAAATATTTGGAGAGTTTTGGAACGTCCAAACCCGGCTAGGGCAAGGCGTCTCGGCCTCAGTATACCGTGTGAGCTCAGGGAGGGCGAGTACGGCCGCGGTTAAGGAGTTCCAGGCTGACACTCAGAGTGGAGATTACGGGTACCAAAAGGAGAGGTCCGTGCTGGAAGACATACAAGGACACAAAAACATCGTAACGCTGTACGGGGTGTTCACCAACCGCAGCCAGGTGGGTGTGGCCACGCACTGCCTGCTGCTTGAGCTGCTGGACGTCAGTGTGTCTGAGCTGCTTGTGAGGGCCAGTACCCAAGGCCGAGCCTGCAGCCCCCAGTGTGGTGGTTCCCAGAAGCAGGGCCACTCCATGTGGCTGGTGCAGCACTGTGCCAGGGACGTCCTGGAGGCCCTTGCCTTCCTCCATAGAGCGGGCTATGTCCATGCCGACCTCAAGCCCCGCAATGTGCTCTGGAGCGCAGACGATGAGTGCTTCAAACTCATCGACTTTGGCCTCAGCTTCAAAGAGGGCAACCAGGATGTGAAATACATCCAGACAGATGGGTACCGTGCCCCGGAGGCTGAGCGTCAATACTCCCTGGCCCAGGCGGGGATGGAGGTGGATGGTGACTCTGGCTGCTCGGCCGCTGTGGACCTCTGGAGCTTGGCAATCGTCCTATTGGAGATGTACTCGGGCATCAAACTCAAAGACACCGTCAGGACACCCGAGtggaagGACAACAGTGCAGCAATAGTCGACCAGATCTTTGCCAGTAACAGTGTGGTGGTTCCTGCCATCCCTGTCTATCACCTCAGAGACCTTATCAAAAGTATGCTTCACAACAACCCCAAGCACAGAGGCACAGCCGAGAAGGCCCTGCTTAGCCCGTTCTTCAGCATTCCTTTTGctCCTCACATAGAAGACTTGGTTCTGCTTCCCTCTCCTGTTCTGCGCCTGCTCAACCTGATTGATGACGGCCACCTGCACAATGAGGAGGAGTATGAAGACATCTTGGAGGACATGACGGAGGAGTGTCAGAAGTATGGCTCTGTGGTCTCTTTGCTCATCCCCAAGGAGAACCCAGGCAaaggacagGTGTTTGTAGAATACGCTAACGCAGGCGACTCCAAAGAGGCCCAGAGACTGTTGACGGGACGGACCTTTGACGGGAAGTTTGTCGTTGCCACGTTCTACCCCCGGAGTGCTTACAAGAGAGGCTATCTGTACCAGACCGtgcagtgaacacacacacacacacacacacacaccgtctgctGAAGAGCACAGGCCTAGGCCTCAGTCAGTCACTGTCATGATGTGTATAGTCATATCAGATCACCACTCTGCTTTCTGCAGCCTTTAGAGCCAGAGTTAACCTAGTGTGTCCTGTAGCTTTACTGTATGTAGCAACAGTCTGCGAAAGGAAAGATTTGTATAATCCAATCTTCCATGTCCTGCTATGGGGATGTATACTGCTGGATGCTACGGTTGACATATTCAGATGGGTCATATGTTTATCATAGCTGGCTTGACTTTTGATAAATGGATCCTCACTGGCCAAAACTGCACACTTTCCCACTTTGCACACGGTGCTCATGTCAAACCCTGAACAAGATAATTACTTGATGTCCACCGATCTTGAAGAGCACAAGTACAGTACCAAGTACCCTATGGGTTTCGTAAACCCAG

Function

NR:

description
serine/threonine-protein kinase Kist-like

GO: NA

KEGG:

id description
K08877 UHMK1, KIS; serine/threonine-protein kinase Kist

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021599467.2 True 2282 mRNA 0.51 8 29284901 29303940

Neighbor

gene id symbol gene type direction distance location
LOC100135939 LOC106584136 coding upstream 131197 29130397 ~ 29153704 (+)
paics LOC106584129 coding upstream 283409 28992608 ~ 29001492 (+)
si:dkeyp-117h8.4 LOC106584130 coding upstream 296326 28983183 ~ 28988575 (+)
cracd kiaa1211 coding upstream 307224 28949396 ~ 28977677 (+)
cep135 cep135 coding upstream 340130 28925986 ~ 28944771 (+)
LOC110521693 LOC106584143 coding downstream 294610 29598550 ~ 29604909 (+)
LOC110521700 NA coding downstream 1232296 30536236 ~ 30548668 (+)
LOC110521701 LOC106584149 coding downstream 1542741 30846681 ~ 30850528 (+)
si:ch211-117l17.6 NA coding downstream 1554898 30858838 ~ 30860485 (+)
LOC110521703 LOC106584150 coding downstream 1559684 30863624 ~ 30866524 (+)
G2220772 LOC107676188 non-coding upstream 54108 29229989 ~ 29230793 (+)
G2220760 NA non-coding upstream 68345 29215464 ~ 29216556 (+)
G2220759 NA non-coding upstream 69608 29213484 ~ 29215293 (+)
G2220709 NA non-coding upstream 88077 29196359 ~ 29196824 (+)
G2220707 NA non-coding upstream 88693 29193305 ~ 29196208 (+)
G2220774 NA non-coding downstream 4172 29308112 ~ 29320362 (+)
G2220773 NA non-coding downstream 6635 29310575 ~ 29331966 (+)
G2220823 NA non-coding downstream 47634 29351574 ~ 29410937 (+)
G2220856 LOC106584141 non-coding downstream 109216 29413156 ~ 29527132 (+)
G2220937 NA non-coding downstream 234128 29538068 ~ 29540285 (+)
G2220253 NA other upstream 263019 29021586 ~ 29021882 (+)
G2219991 NA other upstream 735423 28549029 ~ 28549478 (+)
G2219989 LOC105940532 other upstream 736817 28547538 ~ 28548084 (+)
fip1l1a fip1l1 other upstream 977575 28260830 ~ 28307538 (+)
LOC110521656 LOC106584103 other upstream 1441203 27823914 ~ 27844041 (+)
G2225948 NA other downstream 4268200 33572140 ~ 33604894 (+)
LOC110521757 NA other downstream 5878029 35181902 ~ 35190209 (+)
G2228777 NA other downstream 6214294 35518234 ~ 35519242 (+)
LOC110521768 sirt5 other downstream 6389370 35693310 ~ 35735400 (+)

Expression


Co-expression Network