LOC110521701 (LOC106584149)


Basic Information

Item Value
gene id LOC110521701
gene name LOC106584149
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050570.1
NCBI id CM025857.1
chromosome length 46327593
location 30846681 ~ 30850528 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036969302.1
GCCAGAGGGGAATAGCAAACGGGGGAATAGAATAGGGAAGTCCAACTAGAAGTAGGAAAAAAATCAGTTGTTGAGCATATCGACCAGTGCTAATTTTTCAGGAGTACAAACTAATTTTCAGGGATTTTGAAGGGATTTTGGATAACTATATATATACATTaTCAGCTGTTTCCATCCTCCATCTCTCATGTTAGGTCGAATATCAGGCACAGGGGCATGGACAGGAAGCTTTTTTGTTGTTTCTGTAGGGCCCCCAAGCCCCCGAACGATGAAGTTGTGTCATGGCGACAGTCCCTCAAAAAACTTCTGGAGTGTAAAAGGCAGCTGGCCTTCAGAGAGTTCCTGAAGACAGAGTACAGCGAGGAGAACATCTTGTTCTGGCTGGTCTGTGAGGAATACAAGACCATCACCTCCAACACTGAGATGGCTGAAGCAGCGAAAAGAATCTACACAGAGTTTGTACAGGTCGACGCCCCCAGACAGATAAACATCGACTGTGAGACCAGGCAGGAGATTACAAACAGCATGTCTCAGCCGACCCTGAGCTGCTTCGACAAGGCACAGAGAGTGATATACAAGCTGATGAAAAAGGACAGTTATCCCAGATTCCTGAAATCTGAAATCTATCAGGCTCTTTTTGAACCATCAGACGCCAGCTGAGGTTCCAGGACCAGGTGAAGAATAATACCTGTCTACAACCATCAGACTGTGGGCTGACAGTGattcaactctctctcttctctaactacctgtcCATGTTAGTTCAGCGTGGTTTAACTTTGGGCTGGAGCACAAAACACAGGGCTCTCTCTAATGATAATTCATCATCTAGCTTAGTGGCTCCCAATCGTGTTCTATTATTGTAAGGCGGGATAATCTATCCTTATAAAAATGCTACAATTATAGATATGATTAAACATTTTATActataaatactttatttacagtgttatgtattatgtatgttttataacttgtattattttttacaagGTTAGTATTATCCATTGGTTATCCATTGATTGTTACTTTGCACATGAGCTGTAATTATTTATGGTATTTTCCCGCTGTCTATGTAAATTAGGATACTGTATGTCAGACTTGCCATTAATGTACAAGACAACATTTATGTTGATTTGTTCATTTCTGTGTTTTTGTCTATGACAGGAATTCAACAGGCCAACCAATacaattttgtgtgtgtgtgtgtgtgtgtgtgcatttgtgtgtgtgcatgtgtaattGCAACTCAAAAGGCCAAGCCAACACAATCAGTGCAGCATCAACTGAGGTCgtagtctctgtctctcagtcataCCCTCATGGTGTTCCTCTTTATCTCTCATAACCAGACCAAACCCAAACATTCTGATCCCTAGGCCACCAGGCCAATGGGCCATCGTttgaaacatctctctctctctttctccccctctgctTCTCCCTTCTGTTTTCACACATTGCACAACGTGATTTCATGTTGTCTACATTAATCTAATATAGTGCTATGTCTAACACCAGTCCAGGTGTATAGTCTCTCCTCAGCAGGAGTCTATGTACTGTAGAAGCACCACACTATAACACCCATGACATTCCCCTTTTTGCACACAGACCCCCTGCAAGGATACACACCTGGTGTCTTCCACTAGTAAATGTGGATACATGCAAGTGTAGCATGTACAAACCTGCTCTGGGATACAATATCATGCTCACTTGAGTTACACATCAATGTTCTCTCAGTGAgttacacatgcatgcatgcacccacacacaaatGGGACTTTAATTGTGTTTCTGGCCAAATCTACTGCATGTGTTGCTGGTATACATCACTCTCTGCAGGAGGCTGTATCATGCTGAGAGGAAACAGCAAGGAATACTGAGACTTAACACAGTCTGTTAAGTCCTGGACTGTAGTCTTATTACTGTCACTATGTCTTCCTCTCTCCAAAAGCTGTGGCAGTTTTTAGTATACTTTTCCATTCATATCAACAAATCTAATCACTGTTCCAGCTGTATGTGCACATGGACATCTTTCCAATTGGTCATAATACATTAAAGCCCTGTCTCCACAA
>XM_036969303.1
GCCAGAGGGGAATAGCAAACGGGGGAATAGAATAGGGAAGTCCAACTAGAAGTAGGAAAAAAATCAGTTGTTGAGCATATCGACCAGTGCTAATTTTTCAGGAGTACAAACTAATTTTCAGGGATTTTGAAGGGATTTTGGATAACTATATATATACATTaTCAGCTGTTTCCATCCTCCATCTCTCATGTTAGGTCGAATATCAGGCACAGGGGCATGGACAGGAAGGCCCCCAAGCCCCCGAACGATGAAGTTGTGTCATGGCGACAGTCCCTCAAAAAACTTCTGGAGTGTAAAACAGGGCAGCTGGCCTTCAGAGAGTTCCTGAAGACAGAGTACAGCGAGGAGAACATCTTGTTCTGGCTGGTCTGTGAGGAATACAAGACCATCACCTCCAACACTGAGATGGCTGAAGCAGCGAAAAGAATCTACACAGAGTTTGTACAGGTCGACGCCCCCAGACAGATAAACATCGACTGTGAGACCAGGCAGGAGATTACAAACAGCATGTCTCAGCCGACCCTGAGCTGCTTCGACAAGGCACAGAGAGTGATATACAAGCTGATGAAAAAGGACAGTTATCCCAGATTCCTGAAATCTGAAATCTATCAGGCTCTTTTTGAACCATCAGACGCCAGCTGAGGTTCCAGGACCAGGTGAAGAATAATACCTGTCTACAACCATCAGACTGTGGGCTGACAGTGattcaactctctctcttctctaactacctgtcCATGTTAGTTCAGCGTGGTTTAACTTTGGGCTGGAGCACAAAACACAGGGCTCTCTCTAATGATAATTCATCATCTAGCTTAGTGGCTCCCAATCGTGTTCTATTATTGTAAGGCGGGATAATCTATCCTTATAAAAATGCTACAATTATAGATATGATTAAACATTTTATActataaatactttatttacagtgttatgtattatgtatgttttataacttgtattattttttacaagGTTAGTATTATCCATTGGTTATCCATTGATTGTTACTTTGCACATGAGCTGTAATTATTTATGGTATTTTCCCGCTGTCTATGTAAATTAGGATACTGTATGTCAGACTTGCCATTAATGTACAAGACAACATTTATGTTGATTTGTTCATTTCTGTGTTTTTGTCTATGACAGGAATTCAACAGGCCAACCAATacaattttgtgtgtgtgtgtgtgtgtgtgtgcatttgtgtgtgtgcatgtgtaattGCAACTCAAAAGGCCAAGCCAACACAATCAGTGCAGCATCAACTGAGGTCgtagtctctgtctctcagtcataCCCTCATGGTGTTCCTCTTTATCTCTCATAACCAGACCAAACCCAAACATTCTGATCCCTAGGCCACCAGGCCAATGGGCCATCGTttgaaacatctctctctctctttctccccctctgctTCTCCCTTCTGTTTTCACACATTGCACAACGTGATTTCATGTTGTCTACATTAATCTAATATAGTGCTATGTCTAACACCAGTCCAGGTGTATAGTCTCTCCTCAGCAGGAGTCTATGTACTGTAGAAGCACCACACTATAACACCCATGACATTCCCCTTTTTGCACACAGACCCCCTGCAAGGATACACACCTGGTGTCTTCCACTAGTAAATGTGGATACATGCAAGTGTAGCATGTACAAACCTGCTCTGGGATACAATATCATGCTCACTTGAGTTACACATCAATGTTCTCTCAGTGAgttacacatgcatgcatgcacccacacacaaatGGGACTTTAATTGTGTTTCTGGCCAAATCTACTGCATGTGTTGCTGGTATACATCACTCTCTGCAGGAGGCTGTATCATGCTGAGAGGAAACAGCAAGGAATACTGAGACTTAACACAGTCTGTTAAGTCCTGGACTGTAGTCTTATTACTGTCACTATGTCTTCCTCTCTCCAAAAGCTGTGGCAGTTTTTAGTATACTTTTCCATTCATATCAACAAATCTAATCACTGTTCCAGCTGTATGTGCACATGGACATCTTTCCAATTGGTCATAATACATTAAAGCCCTGTCTCCACAA
>XM_036969304.1
GCCAGAGGGGAATAGCAAACGGGGGAATAGAATAGGGAAGTCCAACTAGAAGTAGGAAAAAAATCAGTTGTTGAGCATATCGACCAGTGCTAATTTTTCAGGAGTACAAACTAATTTTCAGGGATTTTGAAGGGATTTTGGATAACTATATATATACATTaTCAGCTGTTTCCATCCTCCATCTCTCATGTTAGGTCGAATATCAGGCACAGGGGCATGGACAGGAAGGCCCCCAAGCCCCCGAACGATGAAGTTGTGTCATGGCGACAGTCCCTCAAAAAACTTCTGGAGTGTAAAAGGCAGCTGGCCTTCAGAGAGTTCCTGAAGACAGAGTACAGCGAGGAGAACATCTTGTTCTGGCTGGTCTGTGAGGAATACAAGACCATCACCTCCAACACTGAGATGGCTGAAGCAGCGAAAAGAATCTACACAGAGTTTGTACAGGTCGACGCCCCCAGACAGATAAACATCGACTGTGAGACCAGGCAGGAGATTACAAACAGCATGTCTCAGCCGACCCTGAGCTGCTTCGACAAGGCACAGAGAGTGATATACAAGCTGATGAAAAAGGACAGTTATCCCAGATTCCTGAAATCTGAAATCTATCAGGCTCTTTTTGAACCATCAGACGCCAGCTGAGGTTCCAGGACCAGGTGAAGAATAATACCTGTCTACAACCATCAGACTGTGGGCTGACAGTGattcaactctctctcttctctaactacctgtcCATGTTAGTTCAGCGTGGTTTAACTTTGGGCTGGAGCACAAAACACAGGGCTCTCTCTAATGATAATTCATCATCTAGCTTAGTGGCTCCCAATCGTGTTCTATTATTGTAAGGCGGGATAATCTATCCTTATAAAAATGCTACAATTATAGATATGATTAAACATTTTATActataaatactttatttacagtgttatgtattatgtatgttttataacttgtattattttttacaagGTTAGTATTATCCATTGGTTATCCATTGATTGTTACTTTGCACATGAGCTGTAATTATTTATGGTATTTTCCCGCTGTCTATGTAAATTAGGATACTGTATGTCAGACTTGCCATTAATGTACAAGACAACATTTATGTTGATTTGTTCATTTCTGTGTTTTTGTCTATGACAGGAATTCAACAGGCCAACCAATacaattttgtgtgtgtgtgtgtgtgtgtgtgcatttgtgtgtgtgcatgtgtaattGCAACTCAAAAGGCCAAGCCAACACAATCAGTGCAGCATCAACTGAGGTCgtagtctctgtctctcagtcataCCCTCATGGTGTTCCTCTTTATCTCTCATAACCAGACCAAACCCAAACATTCTGATCCCTAGGCCACCAGGCCAATGGGCCATCGTttgaaacatctctctctctctttctccccctctgctTCTCCCTTCTGTTTTCACACATTGCACAACGTGATTTCATGTTGTCTACATTAATCTAATATAGTGCTATGTCTAACACCAGTCCAGGTGTATAGTCTCTCCTCAGCAGGAGTCTATGTACTGTAGAAGCACCACACTATAACACCCATGACATTCCCCTTTTTGCACACAGACCCCCTGCAAGGATACACACCTGGTGTCTTCCACTAGTAAATGTGGATACATGCAAGTGTAGCATGTACAAACCTGCTCTGGGATACAATATCATGCTCACTTGAGTTACACATCAATGTTCTCTCAGTGAgttacacatgcatgcatgcacccacacacaaatGGGACTTTAATTGTGTTTCTGGCCAAATCTACTGCATGTGTTGCTGGTATACATCACTCTCTGCAGGAGGCTGTATCATGCTGAGAGGAAACAGCAAGGAATACTGAGACTTAACACAGTCTGTTAAGTCCTGGACTGTAGTCTTATTACTGTCACTATGTCTTCCTCTCTCCAAAAGCTGTGGCAGTTTTTAGTATACTTTTCCATTCATATCAACAAATCTAATCACTGTTCCAGCTGTATGTGCACATGGACATCTTTCCAATTGGTCATAATACATTAAAGCCCTGTCTCCACAA
>XM_021599483.2
CAGAGGGGAATAGCAAACGGGGGAATAGAATAGGGAAGTCCAACTAGAAGTAGGAAAAAAATCAGTTGTTGAGCATATCGACCAGTGCTAATTTTTCAGGAGTACAAACTAATTTTCAGGGATTTTGAAGGGATTTTGGATAACTATATATATACATTaTCAGCTGTTTCCATCCTCCATCTCTCATGTTAGGTCGAATATCAGGCACAGGGGCATGGACAGGAAGCTTTTTTGTTGTTTCTGTAGGGCCCCCAAGCCCCCGAACGATGAAGTTGTGTCATGGCGACAGTCCCTCAAAAAACTTCTGGAGTGTAAAACAGGGCAGCTGGCCTTCAGAGAGTTCCTGAAGACAGAGTACAGCGAGGAGAACATCTTGTTCTGGCTGGTCTGTGAGGAATACAAGACCATCACCTCCAACACTGAGATGGCTGAAGCAGCGAAAAGAATCTACACAGAGTTTGTACAGGTCGACGCCCCCAGACAGATAAACATCGACTGTGAGACCAGGCAGGAGATTACAAACAGCATGTCTCAGCCGACCCTGAGCTGCTTCGACAAGGCACAGAGAGTGATATACAAGCTGATGAAAAAGGACAGTTATCCCAGATTCCTGAAATCTGAAATCTATCAGGCTCTTTTTGAACCATCAGACGCCAGCTGAGGTTCCAGGACCAGGTGAAGAATAATACCTGTCTACAACCATCAGACTGTGGGCTGACAGTGattcaactctctctcttctctaactacctgtcCATGTTAGTTCAGCGTGGTTTAACTTTGGGCTGGAGCACAAAACACAGGGCTCTCTCTAATGATAATTCATCATCTAGCTTAGTGGCTCCCAATCGTGTTCTATTATTGTAAGGCGGGATAATCTATCCTTATAAAAATGCTACAATTATAGATATGATTAAACATTTTATActataaatactttatttacagtgttatgtattatgtatgttttataacttgtattattttttacaagGTTAGTATTATCCATTGGTTATCCATTGATTGTTACTTTGCACATGAGCTGTAATTATTTATGGTATTTTCCCGCTGTCTATGTAAATTAGGATACTGTATGTCAGACTTGCCATTAATGTACAAGACAACATTTATGTTGATTTGTTCATTTCTGTGTTTTTGTCTATGACAGGAATTCAACAGGCCAACCAATacaattttgtgtgtgtgtgtgtgtgtgtgtgcatttgtgtgtgtgcatgtgtaattGCAACTCAAAAGGCCAAGCCAACACAATCAGTGCAGCATCAACTGAGGTCgtagtctctgtctctcagtcataCCCTCATGGTGTTCCTCTTTATCTCTCATAACCAGACCAAACCCAAACATTCTGATCCCTAGGCCACCAGGCCAATGGGCCATCGTttgaaacatctctctctctctttctccccctctgctTCTCCCTTCTGTTTTCACACATTGCACAACGTGATTTCATGTTGTCTACATTAATCTAATATAGTGCTATGTCTAACACCAGTCCAGGTGTATAGTCTCTCCTCAGCAGGAGTCTATGTACTGTAGAAGCACCACACTATAACACCCATGACATTCCCCTTTTTGCACACAGACCCCCTGCAAGGATACACACCTGGTGTCTTCCACTAGTAAATGTGGATACATGCAAGTGTAGCATGTACAAACCTGCTCTGGGATACAATATCATGCTCACTTGAGTTACACATCAATGTTCTCTCAGTGAgttacacatgcatgcatgcacccacacacaaatGGGACTTTAATTGTGTTTCTGGCCAAATCTACTGCATGTGTTGCTGGTATACATCACTCTCTGCAGGAGGCTGTATCATGCTGAGAGGAAACAGCAAGGAATACTGAGACTTAACACAGTCTGTTAAGTCCTGGACTGTAGTCTTATTACTGTCACTATGTCTTCCTCTCTCCAAAAGCTGTGGCAGTTTTTAGTATACTTTTCCATTCATATCAACAAATCTAATCACTGTTCCAGCTGTATGTGCACATGGACATCTTTCCAATTGGTCATAATACATTAAAGCCCTGTCTCCACAA
>XM_036969305.1
CAGAGGGGAATAGCAAACGGGGGAATAGAATAGGGAAGTCCAACTAGAAGTAGGAAAAAAATCAGTTGTTGAGCATATCGACCAGTGCTAATTTTTCAGGAGTACAAACTAATTTTCAGGGATTTTGAAGGGATTTTGGATAACTATATATATACATTCAGGGCAGCTGGCCTTCAGAGAGTTCCTGAAGACAGAGTACAGCGAGGAGAACATCTTGTTCTGGCTGGTCTGTGAGGAATACAAGACCATCACCTCCAACACTGAGATGGCTGAAGCAGCGAAAAGAATCTACACAGAGTTTGTACAGGTCGACGCCCCCAGACAGATAAACATCGACTGTGAGACCAGGCAGGAGATTACAAACAGCATGTCTCAGCCGACCCTGAGCTGCTTCGACAAGGCACAGAGAGTGATATACAAGCTGATGAAAAAGGACAGTTATCCCAGATTCCTGAAATCTGAAATCTATCAGGCTCTTTTTGAACCATCAGACGCCAGCTGAGGTTCCAGGACCAGGTGAAGAATAATACCTGTCTACAACCATCAGACTGTGGGCTGACAGTGattcaactctctctcttctctaactacctgtcCATGTTAGTTCAGCGTGGTTTAACTTTGGGCTGGAGCACAAAACACAGGGCTCTCTCTAATGATAATTCATCATCTAGCTTAGTGGCTCCCAATCGTGTTCTATTATTGTAAGGCGGGATAATCTATCCTTATAAAAATGCTACAATTATAGATATGATTAAACATTTTATActataaatactttatttacagtgttatgtattatgtatgttttataacttgtattattttttacaagGTTAGTATTATCCATTGGTTATCCATTGATTGTTACTTTGCACATGAGCTGTAATTATTTATGGTATTTTCCCGCTGTCTATGTAAATTAGGATACTGTATGTCAGACTTGCCATTAATGTACAAGACAACATTTATGTTGATTTGTTCATTTCTGTGTTTTTGTCTATGACAGGAATTCAACAGGCCAACCAATacaattttgtgtgtgtgtgtgtgtgtgtgtgcatttgtgtgtgtgcatgtgtaattGCAACTCAAAAGGCCAAGCCAACACAATCAGTGCAGCATCAACTGAGGTCgtagtctctgtctctcagtcataCCCTCATGGTGTTCCTCTTTATCTCTCATAACCAGACCAAACCCAAACATTCTGATCCCTAGGCCACCAGGCCAATGGGCCATCGTttgaaacatctctctctctctttctccccctctgctTCTCCCTTCTGTTTTCACACATTGCACAACGTGATTTCATGTTGTCTACATTAATCTAATATAGTGCTATGTCTAACACCAGTCCAGGTGTATAGTCTCTCCTCAGCAGGAGTCTATGTACTGTAGAAGCACCACACTATAACACCCATGACATTCCCCTTTTTGCACACAGACCCCCTGCAAGGATACACACCTGGTGTCTTCCACTAGTAAATGTGGATACATGCAAGTGTAGCATGTACAAACCTGCTCTGGGATACAATATCATGCTCACTTGAGTTACACATCAATGTTCTCTCAGTGAgttacacatgcatgcatgcacccacacacaaatGGGACTTTAATTGTGTTTCTGGCCAAATCTACTGCATGTGTTGCTGGTATACATCACTCTCTGCAGGAGGCTGTATCATGCTGAGAGGAAACAGCAAGGAATACTGAGACTTAACACAGTCTGTTAAGTCCTGGACTGTAGTCTTATTACTGTCACTATGTCTTCCTCTCTCCAAAAGCTGTGGCAGTTTTTAGTATACTTTTCCATTCATATCAACAAATCTAATCACTGTTCCAGCTGTATGTGCACATGGACATCTTTCCAATTGGTCATAATACATTAAAGCCCTGTCTCCACAA

Function

NR:

description
regulator of G-protein signaling 21-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036969302.1 False 2075 mRNA 0.42 5 30846681 30850528
XM_036969303.1 False 2057 mRNA 0.42 5 30846681 30850528
XM_036969304.1 False 2054 mRNA 0.42 5 30846681 30850528
XM_021599483.2 False 2076 mRNA 0.42 5 30846683 30850528
XM_036969305.1 True 1917 mRNA 0.41 3 30846683 30850528

Neighbor

gene id symbol gene type direction distance location
LOC110521700 NA coding upstream 298013 30536236 ~ 30548668 (+)
LOC110521693 LOC106584143 coding upstream 1241772 29598550 ~ 29604909 (+)
LOC110521691 LOC106584140 coding upstream 1542741 29284901 ~ 29303940 (+)
LOC100135939 LOC106584136 coding upstream 1692977 29130397 ~ 29153704 (+)
paics LOC106584129 coding upstream 1845189 28992608 ~ 29001492 (+)
si:ch211-117l17.6 NA coding downstream 8310 30858838 ~ 30860485 (+)
LOC110521703 LOC106584150 coding downstream 13096 30863624 ~ 30866524 (+)
rgs2 LOC106584094 coding downstream 28158 30878686 ~ 30880955 (+)
LOC110521706 NA coding downstream 71365 30921893 ~ 30926393 (+)
LOC110521707 LOC106584154 coding downstream 84927 30935455 ~ 30967780 (+)
G2222860 NA non-coding upstream 44221 30802158 ~ 30802460 (+)
G2222780 NA non-coding upstream 88410 30758014 ~ 30758271 (+)
G2222733 NA non-coding upstream 119699 30726609 ~ 30726982 (+)
G2222732 NA non-coding upstream 120240 30725961 ~ 30726441 (+)
G2222713 NA non-coding upstream 134747 30711729 ~ 30711934 (+)
G2222914 NA non-coding downstream 22072 30872600 ~ 30873052 (+)
G2222883 LOC106584153 non-coding downstream 36100 30886628 ~ 30900111 (+)
G2222919 NA non-coding downstream 53322 30903850 ~ 30904125 (+)
G2222933 NA non-coding downstream 73999 30924527 ~ 30924773 (+)
G2222939 NA non-coding downstream 83052 30933580 ~ 30933949 (+)
G2220253 NA other upstream 1824799 29021586 ~ 29021882 (+)
G2219991 NA other upstream 2297203 28549029 ~ 28549478 (+)
G2219989 LOC105940532 other upstream 2298597 28547538 ~ 28548084 (+)
fip1l1a fip1l1 other upstream 2539355 28260830 ~ 28307538 (+)
LOC110521656 LOC106584103 other upstream 3002983 27823914 ~ 27844041 (+)
G2225948 NA other downstream 2721612 33572140 ~ 33604894 (+)
LOC110521757 NA other downstream 4331441 35181902 ~ 35190209 (+)
G2228777 NA other downstream 4667706 35518234 ~ 35519242 (+)
LOC110521768 sirt5 other downstream 4842782 35693310 ~ 35735400 (+)

Expression


Co-expression Network