si:ch211-117l17.6


Basic Information

Item Value
gene id si:ch211-117l17.6
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050570.1
NCBI id CM025857.1
chromosome length 46327593
location 30858838 ~ 30860485 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021599484.2
CCTCTCTTGAGATGATAAATACCTGCCCAGGATGGGCCTGGAATGTTTACTAAGACCGTACGGTCTACATCTAATTCCTAGGAGGAATCGCTGTCAATTATGTGAAGATGCCCAAACTTTTATTTTCAAAGATTCGGATCTATGAATTGAAGGATATACCGCAAAATAGAACACAGAGAAGAAGGATCGATATCCTTCTAAGCAGAAAAAGACAGAAAAAAGACATCCAGTGTATTCTGGCACAAAAGATAAATGATGAGTCCTTTTCTACAAAAATCAATCTAGAGGACAATAGAGGAATCCAGCCAACTCTTGAGACCTTGTTGAAGGACGAAAGGTGCCTTGCAGCCTTCCGAGCCTTCCTGCGGTCCGAATTCAGTGAGGAGAATATTGAATTTTGGCTAGCATGCAGAGACTACAGAAAGACCATCTCACCGGCTGACCTGTTCTGGAAAGCAACAGAGATCTACCAGGAGTTCCTCCATCCCCAGGCCCAGAGAGAGATCAACGTTGACCACCACATCCACGAGAAGATCAAAAGGTCCATGAAAGCCCCTGCTCTATGCTGCTTTGACGAGGCAGTGAGACATGTGTACAAACTGATGGAGAGCGACTCGTATTCCAGGTTCCTCAGGTCAGATGCCTACCTGGGGCTCAGACGCAAAGCCAGGACCTTCTGGTAGAGGTTACGGGTCAAGAGTTTGTGAATCAAAATTCACCAAGTCCAAACAAGGAGGATTCCAAACGAGTCATGGAAACATGAGACTTTAGATCCTGAGGATAGAACTGAAAGATCCCCACAGGAAGTGACACATAATGACCACAGGAAATTAATTATGAgttggagaagaagaaaaaatgagTATAAAGTATGGAGAAGCATTGAGTGTTA

Function

NR:

description
regulator of G-protein signaling 8-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021599484.2 True 892 mRNA 0.44 5 30858838 30860485

Neighbor

gene id symbol gene type direction distance location
LOC110521701 LOC106584149 coding upstream 8310 30846681 ~ 30850528 (+)
LOC110521700 NA coding upstream 310170 30536236 ~ 30548668 (+)
LOC110521693 LOC106584143 coding upstream 1253929 29598550 ~ 29604909 (+)
LOC110521691 LOC106584140 coding upstream 1554898 29284901 ~ 29303940 (+)
LOC100135939 LOC106584136 coding upstream 1705134 29130397 ~ 29153704 (+)
LOC110521703 LOC106584150 coding downstream 3139 30863624 ~ 30866524 (+)
rgs2 LOC106584094 coding downstream 18201 30878686 ~ 30880955 (+)
LOC110521706 NA coding downstream 61408 30921893 ~ 30926393 (+)
LOC110521707 LOC106584154 coding downstream 74970 30935455 ~ 30967780 (+)
LOC110521708 LOC106584155 coding downstream 118420 30978905 ~ 30989561 (+)
G2222860 NA non-coding upstream 56378 30802158 ~ 30802460 (+)
G2222780 NA non-coding upstream 100567 30758014 ~ 30758271 (+)
G2222733 NA non-coding upstream 131856 30726609 ~ 30726982 (+)
G2222732 NA non-coding upstream 132397 30725961 ~ 30726441 (+)
G2222713 NA non-coding upstream 146904 30711729 ~ 30711934 (+)
G2222914 NA non-coding downstream 12115 30872600 ~ 30873052 (+)
G2222883 LOC106584153 non-coding downstream 26143 30886628 ~ 30900111 (+)
G2222919 NA non-coding downstream 43365 30903850 ~ 30904125 (+)
G2222933 NA non-coding downstream 64042 30924527 ~ 30924773 (+)
G2222939 NA non-coding downstream 73095 30933580 ~ 30933949 (+)
G2220253 NA other upstream 1836956 29021586 ~ 29021882 (+)
G2219991 NA other upstream 2309360 28549029 ~ 28549478 (+)
G2219989 LOC105940532 other upstream 2310754 28547538 ~ 28548084 (+)
fip1l1a fip1l1 other upstream 2551512 28260830 ~ 28307538 (+)
LOC110521656 LOC106584103 other upstream 3015140 27823914 ~ 27844041 (+)
G2225948 NA other downstream 2711655 33572140 ~ 33604894 (+)
LOC110521757 NA other downstream 4321484 35181902 ~ 35190209 (+)
G2228777 NA other downstream 4657749 35518234 ~ 35519242 (+)
LOC110521768 sirt5 other downstream 4832825 35693310 ~ 35735400 (+)

Expression


Co-expression Network