LOC110521703 (LOC106584150)


Basic Information

Item Value
gene id LOC110521703
gene name LOC106584150
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050570.1
NCBI id CM025857.1
chromosome length 46327593
location 30863624 ~ 30866524 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021599486.2
tgacacagagagaggttgaaagagaGTGTCGCAAAAAGACAGAGAGCGcatgtcacagagagagagagatagagagagagcgtagGGGCTTCCTCTCTTGCCACGGTTCACTGGTCTGAGTCTGTGTTTCACCTTCCAGCCCTGCATATAAAGGCCTGAGGTGGAGGGAGACCCCACTATACAGAGAGTGATTCACCCCAGCATGAGCAGCAGCAGGGGACAGAGAGTGTGGGGTTAAAACATGCCCAGCCTAATCATCACAGAGACACTGATACAAACACAGCACTTCAATATGGAGCAGGACGACAGGAGGAGGAACAAGAACTTgGGAAAGAACTTTATGTGCCGACTGCAATGCATGTTCTCACATTCACCCACCTCTGAGAGGCTAAGTTTAGAAGATACCCAACAATGGTCTCAGTCACTGGAGAGACTCCTCGAGTCTAAATATGGACTGGCGACCTTCAGAACCTTTCTGAAGTCTGAATTCAGCGATGAGAACATTGAGTTCTGGCTGACGTGTGAGGAGTACAAGAAAATCAAGTCTTCATTCAGAATGTCATCGAAGGCCAAAAAAATCTATGAGCATTTCATAAAGGCTGAGGCTCCTAAAGAGATAAACATTGACTACCACACGAGGGAGCAGATCAAGAGGGCCGTGAAGAATCCTACACTCCAGTGCTTTGACGATGCCCAGAAGATTGTCTATGGGCTGATGGAGAGAGACTCGTACCCTCGCTTCCTGCGCTCAGACATTTACCGATCCCTCCTGGATTCCCTCGCCGCTGACGCCGTCAAGGGCTAATAGGAGCGGATTAGACGACAGGAGAACGTGACAACAGAAACTGGAATGTTTGGGATTCTACAGGATGGAAGGCTGACCAAGCATAGAGAGACTGACAGGCCTGTGTCCCTACGAACCGTGGTCGCCACAACACAAGACCACACCCTAAAACACTGCAAGTGGGATTCGCCcagagaaaaagaaagacagaaagacagaaggaaAGGCAGAGAGGATATGAGGAATGCTACAGCGCTGCGATTGCACTGGATGCTGCTGTCTTATCTGTAACTCTGGCAGTGACATCATATCATAGGTGATTAGATCGTCTTTGACAGTGATCACCGAGTGAATGACGATCGAACTGAAACACAACGTCAGCAACCATGCAGTCCCCACTCAACCGGAGGTGCTTCCTGTCCTAAAAAGATGGAgaagagagtgtatgtgtgtttgtgtgtgtgtttgtgtgtgagtgtatgtgcgcAACAGGATGCCTATGATACTGTGATAAGATAGGAGATGCAAGGTGGACTTTCACTAGCAATACTAAAGTACGTGGTCTGGAGTGAAACAAAGGAGAGAGCACGCATACAATGGATACCGGCCCAAAATACTATACTATCCTTAATAATATTCACATTTCGTCTCTAAATTCAAACCAGTTTTTCAAAAGGTGGTTGAATCTTTAGATTTGCAAGGCAGTTAAAGACTTCTTACACTGTCTATCATTGAATGATTACCCATTTAGAAGTAGAGGTTAAGTTGTCTGAGTGCAATTGTAGACAGAAGGGTAGCCTATGTCCCACTTTGTATAATGAACTTTGAACTCCTACTTCTCTGATGCAGAATATGTTTTGATTGCTTACAAAGAAAGCACAAAACAATGTTGATAAATTAAGATTAGAATGTTGTACTATTTATTACACAGTCACTGTTAGGATGCTGACTTTTGCAATGCTTGTAAAAATGTTCACGATTAGATtattaaattatattaaattaaattattaaattatTTGCAAA
>XM_021599487.2
acagagagaggttgaaagagaGTGTCGCAAAAAGACAGAGAGCGcatgtcacagagagagagagatagagagagagcgtagGGGCTTCCTCTCTTGCCACGGTTCACTGGTCTGAGTCTGTGTTTCACCTTCCAGCCCTGCATATAAAGGCCTGAGGTGGAGGGAGACCCCACTATACAGAGAGTGATTCACCCCAGCATGAGCAGCAGCAGGGGACAGAGAGTGTGGGGTTAAAACATGCCCAGCCTAATCATCACAGAGACACTGATACAAACACAGCACTTCAATATGGAGCAGGACGACAGGAGGAGGAACAAGAACTTgGGAAAGAACTTTATGTGCCGACTGCAATGCATGTTCTCACATTCACCCACCTCTGAGAGCAGGCTAAGTTTAGAAGATACCCAACAATGGTCTCAGTCACTGGAGAGACTCCTCGAGTCTAAATATGGACTGGCGACCTTCAGAACCTTTCTGAAGTCTGAATTCAGCGATGAGAACATTGAGTTCTGGCTGACGTGTGAGGAGTACAAGAAAATCAAGTCTTCATTCAGAATGTCATCGAAGGCCAAAAAAATCTATGAGCATTTCATAAAGGCTGAGGCTCCTAAAGAGATAAACATTGACTACCACACGAGGGAGCAGATCAAGAGGGCCGTGAAGAATCCTACACTCCAGTGCTTTGACGATGCCCAGAAGATTGTCTATGGGCTGATGGAGAGAGACTCGTACCCTCGCTTCCTGCGCTCAGACATTTACCGATCCCTCCTGGATTCCCTCGCCGCTGACGCCGTCAAGGGCTAATAGGAGCGGATTAGACGACAGGAGAACGTGACAACAGAAACTGGAATGTTTGGGATTCTACAGGATGGAAGGCTGACCAAGCATAGAGAGACTGACAGGCCTGTGTCCCTACGAACCGTGGTCGCCACAACACAAGACCACACCCTAAAACACTGCAAGTGGGATTCGCCcagagaaaaagaaagacagaaagacagaaggaaAGGCAGAGAGGATATGAGGAATGCTACAGCGCTGCGATTGCACTGGATGCTGCTGTCTTATCTGTAACTCTGGCAGTGACATCATATCATAGGTGATTAGATCGTCTTTGACAGTGATCACCGAGTGAATGACGATCGAACTGAAACACAACGTCAGCAACCATGCAGTCCCCACTCAACCGGAGGTGCTTCCTGTCCTAAAAAGATGGAgaagagagtgtatgtgtgtttgtgtgtgtgtttgtgtgtgagtgtatgtgcgcAACAGGATGCCTATGATACTGTGATAAGATAGGAGATGCAAGGTGGACTTTCACTAGCAATACTAAAGTACGTGGTCTGGAGTGAAACAAAGGAGAGAGCACGCATACAATGGATACCGGCCCAAAATACTATACTATCCTTAATAATATTCACATTTCGTCTCTAAATTCAAACCAGTTTTTCAAAAGGTGGTTGAATCTTTAGATTTGCAAGGCAGTTAAAGACTTCTTACACTGTCTATCATTGAATGATTACCCATTTAGAAGTAGAGGTTAAGTTGTCTGAGTGCAATTGTAGACAGAAGGGTAGCCTATGTCCCACTTTGTATAATGAACTTTGAACTCCTACTTCTCTGATGCAGAATATGTTTTGATTGCTTACAAAGAAAGCACAAAACAATGTTGATAAATTAAGATTAGAATGTTGTACTATTTATTACACAGTCACTGTTAGGATGCTGACTTTTGCAATGCTTGTAAAAATGTTCACGATTAGATtattaaattatattaaattaaattattaaattatTTGCAAA
>XM_036969277.1
CAAACACAGCACTTCAATATGGAGCAGGACGACAGGAGGAGGAACAAGAACTTgGGAAAGAACTTTATGTGCCGACTGCAATGCATGTTCTCACATTCACCCACCTCTGAGAGATGGACTGGCGACCTTCAGAACCTTTCTGAAGTCTGAATTCAGCGATGAGAACATTGAGTTCTGGCTGACGTGTGAGGAGTACAAGAAAATCAAGTCTTCATTCAGAATGTCATCGAAGGCCAAAAAAATCTATGAGCATTTCATAAAGGCTGAGGCTCCTAAAGAGATAAACATTGACTACCACACGAGGGAGCAGATCAAGAGGGCCGTGAAGAATCCTACACTCCAGTGCTTTGACGATGCCCAGAAGATTGTCTATGGGCTGATGGAGAGAGACTCGTACCCTCGCTTCCTGCGCTCAGACATTTACCGATCCCTCCTGGATTCCCTCGCCGCTGACGCCGTCAAGGGCTAATAGGAGCGGATTAGACGACAGGAGAACGTGACAACAGAAACTGGAATGTTTGGGATTCTACAGGATGGAAGGCTGACCAAGCATAGAGAGACTGACAGGCCTGTGTCCCTACGAACCGTGGTCGCCACAACACAAGACCACACCCTAAAACACTGCAAGTGGGATTCGCCcagagaaaaagaaagacagaaagacagaaggaaAGGCAGAGAGGATATGAGGAATGCTACAGCGCTGCGATTGCACTGGATGCTGCTGTCTTATCTGTAACTCTGGCAGTGACATCATATCATAGGTGATTAGATCGTCTTTGACAGTGATCACCGAGTGAATGACGATCGAACTGAAACACAACGTCAGCAACCATGCAGTCCCCACTCAACCGGAGGTGCTTCCTGTCCTAAAAAGATGGAgaagagagtgtatgtgtgtttgtgtgtgtgtttgtgtgtgagtgtatgtgcgcAACAGGATGCCTATGATACTGTGATAAGATAGGAGATGCAAGGTGGACTTTCACTAGCAATACTAAAGTACGTGGTCTGGAGTGAAACAAAGGAGAGAGCACGCATACAATGGATACCGGCCCAAAATACTATACTATCCTTAATAATATTCACATTTCGTCTCTAAATTCAAACCAGTTTTTCAAAAGGTGGTTGAATCTTTAGATTTGCAAGGCAGTTAAAGACTTCTTACACTGTCTATCATTGAATGATTACCCATTTAGAAGTAGAGGTTAAGTTGTCTGAGTGCAATTGTAGACAGAAGGGTAGCCTATGTCCCACTTTGTATAATGAACTTTGAACTCCTACTTCTCTGATGCAGAATATGTTTTGATTGCTTACAAAGAAAGCACAAAACAATGTTGATAAATTAAGATTAGAATGTTGTACTATTTATTACACAGTCACTGTTAGGATGCTGACTTTTGCAATGCTTGTAAAAATGTTCACGATTAGATtattaaattatattaaattaaattattaaattatTTGCAAA
>TU2542282
GCATGAGCAGCAGCAGGGGACAGAGAGTGTGGGGTTAAAACATGCCCAGCCTAATCATCACAGAGACACTGATACAAACACAGCACTTCAATATGGAGCAGGACGACAGGAGGAGGAACAAGAACTTgGGAAAGAACTTTATGTGCCGACTGCAATGCATGTTCTCACATTCACCCACCTCTGAGAGATGGACTGGCGACCTTCAGAACCTTTCTGAAGTCTGAATTCAGCGATGAGAACATTGAGTTCTGGCTGACGTGTGAGGAGTACAAGAAAATCAAGTCTTCATTCAGAATGTCATCGAAGGCCAAAAAAATCTATGAGCATTTCATAAAGGCTGAGGCTCCTAAAGAGATAAACATTGACTACCACACGAGGGAGCAGATCAAGAGGGCCGTGAAGAATCCTACACTCCAGTGCTTTGACGATGCCCAGAAGATTGTCTATGGGCTGATGGAGAGAGACTCGTACCCTCGCTTCCTGCGCTCAGACATTTACCGATCCCTCCTGGATTCCCTCGCCGCTGACGCCGTCAAGGGCTAATAGGAGCGGATTAGACGACAGGAGAACGTGACAACAGAAACTGGAATGTTTGGGATTCTACAGGATGGAAGGCTGACCAAGCATAGAGAGACTGACAGGCCTGTGTCCCTACGAACCGTGGTCGCCACAACACAAGACCACACCCTAAAACACTGCAAGTGGGATTCGCCcagagaaaaagaaagacagaaagacagaaggaaAGGCAGAGAGGATATGAGGAATGCTACAGCGCTGCGATTGCACTGGATGCTGCTGTCTTATCTGTAACTCTGGCAGTGACATCATATCATAGGTGATTAGATCGTCTTTGACAGTGATCACCGAGTGAATGACGATCGAACTGAAACACAACGTCAGCAACCATGCAGTCCCCACTCAACCGGAGGTGCTTCCTGTCCTAAAAAGATGGAgaagagagtgtatgtgtgtttgtgtgtgtgtttgtgtgtgagtgtatgtgcgcAACAGGATGCCTATGATACTGTGATAAGATAGGAGATGCAAGGTGGACTTTCACTAGCAATACTAAAGTACGTGGTCTGGAGTGAAACAAAGGAGAGAGCACGCATACAATGGATACCGGCCCAAAATACTATACTATCCTTAATAATATTCACATTTCGTCTCTAAATTCAAACCAGTTTTTCAAAAGGTGGTTGAATCTTTAGATTTGCAAGGCAGTTAAAGACTTCTTACACTGTCTATCATTGAATGATTACCCATTTAGAAGTAGAGGTTAAGTTGTCTGAGTGCAATTGTAGACAGAAGGGTAGCCTATGTCCCACTTTGTATAATGAACTTTGAACTCCTACTTCTCTGATGCAGAATATGTTTTGATTGCTTACAAAGAAAGCACAAAACAATGTTGATAAATTAAGATTAGAATGTTGTACTATTTATTACACAGTCACTGTTAGGATGCTGACTTTTGCAATGCTTGTAAAAATGTTCACGATTAGATtattaaattatattaaattaaattattaaattatTTGCA

Function

NR:

description
regulator of G-protein signaling 21-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021599486.2 False 1810 mRNA 0.44 5 30863624 30866524
XM_021599487.2 False 1809 mRNA 0.44 5 30863628 30866524
XM_036969277.1 False 1474 mRNA 0.43 4 30863898 30866524
TU2542282 True 1546 TUCP 0.43 4 30863824 30866522

Neighbor

gene id symbol gene type direction distance location
si:ch211-117l17.6 NA coding upstream 3139 30858838 ~ 30860485 (+)
LOC110521701 LOC106584149 coding upstream 13096 30846681 ~ 30850528 (+)
LOC110521700 NA coding upstream 314956 30536236 ~ 30548668 (+)
LOC110521693 LOC106584143 coding upstream 1258715 29598550 ~ 29604909 (+)
LOC110521691 LOC106584140 coding upstream 1559684 29284901 ~ 29303940 (+)
rgs2 LOC106584094 coding downstream 12162 30878686 ~ 30880955 (+)
LOC110521706 NA coding downstream 55369 30921893 ~ 30926393 (+)
LOC110521707 LOC106584154 coding downstream 68931 30935455 ~ 30967780 (+)
LOC110521708 LOC106584155 coding downstream 112381 30978905 ~ 30989561 (+)
LOC118945898 NA coding downstream 302382 31168906 ~ 31168960 (+)
G2222860 NA non-coding upstream 61164 30802158 ~ 30802460 (+)
G2222780 NA non-coding upstream 105353 30758014 ~ 30758271 (+)
G2222733 NA non-coding upstream 136642 30726609 ~ 30726982 (+)
G2222732 NA non-coding upstream 137183 30725961 ~ 30726441 (+)
G2222713 NA non-coding upstream 151690 30711729 ~ 30711934 (+)
G2222914 NA non-coding downstream 6076 30872600 ~ 30873052 (+)
G2222883 LOC106584153 non-coding downstream 20104 30886628 ~ 30900111 (+)
G2222919 NA non-coding downstream 37326 30903850 ~ 30904125 (+)
G2222933 NA non-coding downstream 58003 30924527 ~ 30924773 (+)
G2222939 NA non-coding downstream 67056 30933580 ~ 30933949 (+)
G2220253 NA other upstream 1841742 29021586 ~ 29021882 (+)
G2219991 NA other upstream 2314146 28549029 ~ 28549478 (+)
G2219989 LOC105940532 other upstream 2315540 28547538 ~ 28548084 (+)
fip1l1a fip1l1 other upstream 2556298 28260830 ~ 28307538 (+)
LOC110521656 LOC106584103 other upstream 3019926 27823914 ~ 27844041 (+)
G2225948 NA other downstream 2705616 33572140 ~ 33604894 (+)
LOC110521757 NA other downstream 4315445 35181902 ~ 35190209 (+)
G2228777 NA other downstream 4651710 35518234 ~ 35519242 (+)
LOC110521768 sirt5 other downstream 4826786 35693310 ~ 35735400 (+)
LOC110521770 igfbp-1a2 other downstream 4934508 35800643 ~ 35805071 (+)

Expression


Co-expression Network