Item | Value |
---|---|
gene id | LOC110521757 |
gene name | NA |
gene type | misc |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_050570.1 |
NCBI id | CM025857.1 |
chromosome length | 46327593 |
location | 35181902 ~ 35190209 (+) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
description |
---|
unnamed protein product |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XR_005040941.1 | False | 5801 | mRNA | 0.42 | 3 | 35181902 | 35190209 |
XR_005040942.1 | False | 3638 | mRNA | 0.43 | 4 | 35181902 | 35190209 |
XR_005040943.1 | False | 3654 | mRNA | 0.43 | 4 | 35181902 | 35190209 |
TU2548066 | False | 7797 | TUCP | 0.42 | 2 | 35181969 | 35190151 |
TU2548072 | False | 1133 | lncRNA | 0.43 | 4 | 35181969 | 35189623 |
TU2548075 | False | 1118 | lncRNA | 0.43 | 4 | 35181969 | 35189623 |
TU2548074 | True | 2522 | lncRNA | 0.43 | 2 | 35185509 | 35190151 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC118945793 | NA | coding | upstream | 65144 | 34960599 ~ 35116758 (+) |
LOC110521755 | NA | coding | upstream | 249265 | 34927630 ~ 34932637 (+) |
LOC110521751 | LOC106584199 | coding | upstream | 345629 | 34776810 ~ 34836273 (+) |
LOC110521754 | NA | coding | upstream | 435002 | 34743576 ~ 34746900 (+) |
eef1db | LOC106584198 | coding | upstream | 444425 | 34725626 ~ 34737477 (+) |
LOC110521760 | LOC100380722 | coding | downstream | 215360 | 35405569 ~ 35492375 (+) |
psmg4 | psmg4 | coding | downstream | 353298 | 35543507 ~ 35545435 (+) |
wu:fi04e12 | LOC106584072 | coding | downstream | 392064 | 35582273 ~ 35618259 (+) |
tbc1d7 | tbc1d7 | coding | downstream | 429710 | 35619919 ~ 35634039 (+) |
LOC110521768 | sirt5 | coding | downstream | 533687 | 35693310 ~ 35735400 (+) |
G2228361 | NA | non-coding | upstream | 8676 | 35173009 ~ 35173226 (+) |
G2228282 | NA | non-coding | upstream | 99478 | 35082173 ~ 35082424 (+) |
G2228222 | NA | non-coding | upstream | 152591 | 35029104 ~ 35029311 (+) |
G2228036 | NA | non-coding | upstream | 188884 | 34937595 ~ 34993018 (+) |
G2228020 | NA | non-coding | upstream | 325756 | 34855910 ~ 34856146 (+) |
G2228367 | NA | non-coding | downstream | 7996 | 35198205 ~ 35198924 (+) |
G2228375 | NA | non-coding | downstream | 25499 | 35215708 ~ 35216078 (+) |
G2228379 | NA | non-coding | downstream | 31262 | 35221471 ~ 35221738 (+) |
G2228442 | NA | non-coding | downstream | 45751 | 35235960 ~ 35236288 (+) |
G2228447 | NA | non-coding | downstream | 50228 | 35240437 ~ 35251478 (+) |
G2225948 | NA | other | upstream | 1577008 | 33572140 ~ 33604894 (+) |
LOC110521703 | LOC106584150 | other | upstream | 4315380 | 30863624 ~ 30866524 (+) |
G2220253 | NA | other | upstream | 6160020 | 29021586 ~ 29021882 (+) |
G2219991 | NA | other | upstream | 6632424 | 28549029 ~ 28549478 (+) |
G2219989 | LOC105940532 | other | upstream | 6633818 | 28547538 ~ 28548084 (+) |
G2228777 | NA | other | downstream | 328025 | 35518234 ~ 35519242 (+) |
LOC110521770 | igfbp-1a2 | other | downstream | 610823 | 35800643 ~ 35805071 (+) |
insl5a | rel3 | other | downstream | 2394817 | 37584989 ~ 37587002 (+) |
G2231371 | NA | other | downstream | 3133151 | 38315783 ~ 38336981 (+) |