LOC110521763 (LOC106584075)


Basic Information

Item Value
gene id LOC110521763
gene name LOC106584075
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050570.1
NCBI id CM025857.1
chromosome length 46327593
location 35499988 ~ 35514392 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021599605.2
CCCCAGAGAGCAGTGGCCACGGGATGGCCACATACCAAAACAGTCACATAGCAGGGTTAAGGTCACATTGCGTCATTATTAATGACCAACAGTTAGATTAATCGACTGTCTGCAGCCATAACCACAACGGGCAAACCCGGTGCCACGCACACTCTATGAGAACTTCCAAGGTCTCATTAAATAGATGACGAGTTAGGAACAGGAGAAGATTGAATGGCCTGAAAACTACACGAAAGGAAAGACTACTATCTGCCTGTTGAGAGGGCTTGGCACCAGCTACCTGCTTCTGGGAGATAAATTATCCCGAAAACATTGGCTACTTTTCAAACAGGCTGTTCAGACTACTATGCTATCTATTTTGAATAAGACATTTAAGCATTAGGTTGAAGCGTCTGTCAGAGGGATACTTTCTTCCCAGGACATGGGGAATGGAATAAACAAGGTGCTGCCTGATCTCTATCTGGGAAACTTCAAAGATGCGCGGGACAAGGAGCTGTTGGCGAAGCACAATATCACCCACATCCTTTCCATCCATGACACCGCTGCCCCCATTCTAGAGGAGATGAAATACCTCTGCATCCCTGCTGCGGATGCCTCCAAACAaaacctCTCAAACTGCAGCCCTAGTCCAAGCTTTATATCTGTCTTCAGGACCCCGTTTTTTAAGGACAGCATCATTTTCATCCACGAGTCCAGACTCAAAGGGAAAGGCTGCCTGGTCCACTgTGTTGCAGGTGTGTCTCGTAGCGTTACGTTGGTGGTGGTTTACATCATGACAGTTACTGGGCGGGGCTGGGTGGAGTCGTTAGCTGCGGTGAGGGTGGTACGGCCGTGTGCTGGACCTAACGTGGGGTTCTTAAGGCAGCTAGAGGACTTTGAGAATCTAGAGTTGGCACAGtATAGGGAATGGTTTAAGGACAGGTATAAGGAGAACCATTTTAATGATGAAGAGGAGATCAGAGCCCTTCTGTGGCAGAAGTCTCAGGCCATCAGTGAGTCCATAGCAACGGCCACGGCAACGGCGGCTCAGCTAGCCACCAGCAACACATGACCCCATGGTCTCCTGCCTGCTCAGCCCACGCCAGACAGCTGTCACTCACCCAATGCCCAGCCAATCACCGTTTGACTTCAATATATATAGGTGGGACTGAGTTTCTTATTCAGTTCAACCAACTGTAGGTTAGACCAACTGGAAAATGTTGATTACAAAAAAATGTACAGGTACAGGTCATGAGGGGGATTTCTCAGTGGTCCCTGTGTGCGACTGGGTTCTTGCTCTCCCTTAACAGTCACAGCAACATGCAAGAGCAGTCAATCTGAACGCTCAGGAAATATACATTACAAGcctacattacacacacagagagagagtgagagagagagagtaaacctATAACTTCTATAATCTCCCCCACTCCTGTCCATAcacactccctccccctctgagTGTGgcgtgtgtgggtttgtgtgtgtgtgtgctttgtgttTAGCCTATTACAAGGAATACATCTCTGTATATTCATAGGCCTAAAAGTTATGTGAAACGTAGCACTGTATCTTTGTAGACCGACAGAGATTTTGATTGATTATTCTTGACCATGGATTATAAAAAAGTACTTAAAATGTGTCTACTGTTTCCATGCATATAGAGGTGGTTAAACTTAGGCAATATCACCAAGCACAGACACATTTTCATGTTATCCCCACTAGGCAATCTTCTTTATCACAATGATAATTAGCCTATGACTTTAGGAATTATAATGATTACATAGGTTACTTATTAAAAAATTGGTCTCTGA
>XM_021599607.2
CCCCAGAGAGCAGTGGCCACGGGATGGCCACATACCAAAACAGTCACATAGCAGGGTTAAGGTCACATTGCGTCATTATTAATGACCAACAGTTAGATTAATCGACTGTCTGCAGCCATAACCACAACGGGCAAACCCGGTGCCACGCACACTCTATGAGAACTTCCAAGGTCTCATTAAATAGATGACGAGTTAGGAACAGGAGAAGATTGAATGGCCTGAAAACTACACGAAAGGAAAGACTACTATCTGCCTGTTGAGAGGGCTTGGCACCAGCTACCTGCTTCTGGGAGATAAATTATCCCGAAAACATTGGCTACTTTTCAAACAGGCTGTTCAGACTACTATGCTATCTATTTTGAATAAGACATTTAAGCATTAGGTTGAAGCGTCTGTCAGAGGGATACTTTCTTCCCAGGACATGGGGAATGGAATAAACAAGGTGCTGCCTGATCTCTATCTGGGAAACTTCAAAGATGCGCGGGACAAGGAGCTGTTGGCGAAGCACAATATCACCCACATCCTTTCCATCCATGACACCGCTGCCCCCATTCTAGAGGAGATGAAATACCTCTGCATCCCTGCTGCGGATGCCTCCAAACAaaacctGACCCCGTTTTTTAAGGACAGCATCATTTTCATCCACGAGTCCAGACTCAAAGGGAAAGGCTGCCTGGTCCACTgTGTTGCAGGTGTGTCTCGTAGCGTTACGTTGGTGGTGGTTTACATCATGACAGTTACTGGGCGGGGCTGGGTGGAGTCGTTAGCTGCGGTGAGGGTGGTACGGCCGTGTGCTGGACCTAACGTGGGGTTCTTAAGGCAGCTAGAGGACTTTGAGAATCTAGAGTTGGCACAGtATAGGGAATGGTTTAAGGACAGGTATAAGGAGAACCATTTTAATGATGAAGAGGAGATCAGAGCCCTTCTGTGGCAGAAGTCTCAGGCCATCAGTGAGTCCATAGCAACGGCCACGGCAACGGCGGCTCAGCTAGCCACCAGCAACACATGACCCCATGGTCTCCTGCCTGCTCAGCCCACGCCAGACAGCTGTCACTCACCCAATGCCCAGCCAATCACCGTTTGACTTCAATATATATAGGTGGGACTGAGTTTCTTATTCAGTTCAACCAACTGTAGGTTAGACCAACTGGAAAATGTTGATTACAAAAAAATGTACAGGTACAGGTCATGAGGGGGATTTCTCAGTGGTCCCTGTGTGCGACTGGGTTCTTGCTCTCCCTTAACAGTCACAGCAACATGCAAGAGCAGTCAATCTGAACGCTCAGGAAATATACATTACAAGcctacattacacacacagagagagagtgagagagagagagtaaacctATAACTTCTATAATCTCCCCCACTCCTGTCCATAcacactccctccccctctgagTGTGgcgtgtgtgggtttgtgtgtgtgtgtgctttgtgttTAGCCTATTACAAGGAATACATCTCTGTATATTCATAGGCCTAAAAGTTATGTGAAACGTAGCACTGTATCTTTGTAGACCGACAGAGATTTTGATTGATTATTCTTGACCATGGATTATAAAAAAGTACTTAAAATGTGTCTACTGTTTCCATGCATATAGAGGTGGTTAAACTTAGGCAATATCACCAAGCACAGACACATTTTCATGTTATCCCCACTAGGCAATCTTCTTTATCACAATGATAATTAGCCTATGACTTTAGGAATTATAATGATTACATAGGTTACTTATTAAAAAATTGGTCTCTGA
>XM_036969059.1
CCCCAGAGAGCAGTGGCCACGGGATGGCCACATACCAAAACAGTCACATAGCAGGGTTAAGGTCACATTGCGTCATTATTAATGACCAACAGTTAGATTAATCGACTGTCTGCAGCCATAACCACAACGGGCAAACCCGGTGCCACGCACACTCTATGAGAACTTCCAAGGTCTCATTAAATAGATGACGAGTTAGGAACAGGAGAAGATTGAATGGCCTGAAAACTACACGAAAGGAAAGACTACTATCTGCCTGTTGAGAGGGCTTGGCACCAGCTACCTGCTTCTGGGAGATAAATTATCCCGAAAACATTGGCTACTTTTCAAACAGGCTGTTCAGACTACTATGCTATCTATTTTGAATAAGACATTTAAGCATTAGGTTGAAGCGTCTGTCAGAGGGATACTTTCTTCCCAGGACATGGGGAATGGAATAAACAAGGTGCTGCCTGATCTCTATCTGGGAAACTTCAAAGATGCGCGGGACAAGGAGCTGTTGGCGAAGCACAATATCACCCACATCCTTTCCATCCATGACACCGCTGCCCCCATTCTAGAGGAGATGAAATACCTCTGCATCCCTGCTGCGGATGCCTCCAAACAaaacctTGTTGCAGGTGTGTCTCGTAGCGTTACGTTGGTGGTGGTTTACATCATGACAGTTACTGGGCGGGGCTGGGTGGAGTCGTTAGCTGCGGTGAGGGTGGTACGGCCGTGTGCTGGACCTAACGTGGGGTTCTTAAGGCAGCTAGAGGACTTTGAGAATCTAGAGTTGGCACAGtATAGGGAATGGTTTAAGGACAGGTATAAGGAGAACCATTTTAATGATGAAGAGGAGATCAGAGCCCTTCTGTGGCAGAAGTCTCAGGCCATCAGTGAGTCCATAGCAACGGCCACGGCAACGGCGGCTCAGCTAGCCACCAGCAACACATGACCCCATGGTCTCCTGCCTGCTCAGCCCACGCCAGACAGCTGTCACTCACCCAATGCCCAGCCAATCACCGTTTGACTTCAATATATATAGGTGGGACTGAGTTTCTTATTCAGTTCAACCAACTGTAGGTTAGACCAACTGGAAAATGTTGATTACAAAAAAATGTACAGGTACAGGTCATGAGGGGGATTTCTCAGTGGTCCCTGTGTGCGACTGGGTTCTTGCTCTCCCTTAACAGTCACAGCAACATGCAAGAGCAGTCAATCTGAACGCTCAGGAAATATACATTACAAGcctacattacacacacagagagagagtgagagagagagagtaaacctATAACTTCTATAATCTCCCCCACTCCTGTCCATAcacactccctccccctctgagTGTGgcgtgtgtgggtttgtgtgtgtgtgtgctttgtgttTAGCCTATTACAAGGAATACATCTCTGTATATTCATAGGCCTAAAAGTTATGTGAAACGTAGCACTGTATCTTTGTAGACCGACAGAGATTTTGATTGATTATTCTTGACCATGGATTATAAAAAAGTACTTAAAATGTGTCTACTGTTTCCATGCATATAGAGGTGGTTAAACTTAGGCAATATCACCAAGCACAGACACATTTTCATGTTATCCCCACTAGGCAATCTTCTTTATCACAATGATAATTAGCCTATGACTTTAGGAATTATAATGATTACATAGGTTACTTATTAAAAAATTGGTCTCTGA

Function

NR:

description
dual specificity protein phosphatase 22-B-like isoform X4

GO:

id name namespace
GO:0016311 dephosphorylation biological_process
GO:0016791 phosphatase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021599605.2 False 1799 mRNA 0.46 7 35499988 35514392
XM_021599607.2 False 1757 mRNA 0.46 7 35499988 35514392
XM_036969059.1 True 1682 mRNA 0.46 6 35499988 35514392

Neighbor

gene id symbol gene type direction distance location
LOC110521759 LOC106584097 coding downstream 280299 35216708 ~ 35219689 (-)
LOC110521758 LOC106584076 coding downstream 294796 35197810 ~ 35205192 (-)
LOC110521756 LOC106584201 coding downstream 330718 35166887 ~ 35169270 (-)
LOC110521753 LOC106584200 coding downstream 741842 34742934 ~ 34758146 (-)
LOC110521746 LOC106584195 coding downstream 1016413 34398316 ~ 34483575 (-)
LOC110520993 LOC106584074 coding upstream 31184 35545576 ~ 35577047 (-)
phactr1 LOC106584070 coding upstream 128005 35642397 ~ 35717855 (-)
LOC110521771 igfbp-3a2 coding upstream 296176 35810568 ~ 35873392 (-)
LOC110521773 LOC106584067 coding upstream 386083 35900475 ~ 35966970 (-)
LOC118945798 NA coding upstream 404519 35918911 ~ 35920667 (-)
irf4l irf4 non-coding downstream 4357 35493954 ~ 35500738 (-)
G2228740 LOC100380722 non-coding downstream 8389 35479415 ~ 35491599 (-)
G2228637 NA non-coding downstream 130864 35368798 ~ 35369124 (-)
G2228634 NA non-coding downstream 135482 35364212 ~ 35364506 (-)
G2228631 NA non-coding downstream 138417 35361356 ~ 35361571 (-)
G2229001 NA non-coding upstream 13280 35527672 ~ 35527921 (-)
G2228993 psmg4 non-coding upstream 29180 35543572 ~ 35545433 (-)
G2229040 NA non-coding upstream 74780 35589172 ~ 35589450 (-)
G2229041 NA non-coding upstream 76580 35590972 ~ 35591204 (-)
G2229044 NA non-coding upstream 85103 35599495 ~ 35599793 (-)
G2227801 NA other downstream 957369 34542217 ~ 34542619 (-)
G2227478 NA other downstream 1176333 34311142 ~ 34323655 (-)
G2226745 NA other downstream 1690094 33809379 ~ 33809894 (-)
LOC110521741 LOC106584188 other downstream 1797545 33686041 ~ 33710890 (-)
G2226519 NA other downstream 1870094 33629122 ~ 33629894 (-)
G2229175 NA other upstream 284412 35798804 ~ 35799357 (-)
G2229647 NA other upstream 698754 36213146 ~ 36214385 (-)
LOC110521777 LOC106584061 other upstream 1005960 36520352 ~ 36541228 (-)
LOC110521791 LOC106584041 other upstream 1986818 37498832 ~ 37523064 (-)
G2232820 NA other upstream 3251030 38765422 ~ 38767903 (-)

Expression


Co-expression Network