tbc1d7 (tbc1d7)


Basic Information

Item Value
gene id tbc1d7
gene name tbc1d7
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050570.1
NCBI id CM025857.1
chromosome length 46327593
location 35619919 ~ 35634039 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036969191.1
ATAATGTTCATTGCCATCTGCTGGTTGCACGTGCTGTCGATGAGGAAATGGTCAACATGTTATGAATGGATCAATAGCCTGCGTTTCACTTTCTCATTGCTGCGCATGTGATTTCTGTTATTCAAACATCTTTGGTATTGCTAGCTTGGGTTCCATTGCTTGCATAGTGACGTTGATATACTTATATGAGAAGGAGATGTACCAATAGTGGTTACAGAATCTAGCTAGAGCGATAGCTAGCAGGTTGCAGACAGTCGTGTAGGTCGCGCCCGGCTTCAGAGCTCCTTCCCCGGTGACTGCAAGCTGGAAAGGACGTGGATGCGGTGAGGCCCACGGGTACAACAAGGTGACAGTATGGCTGAGGACCCTCAGAGGAACTTCCGTTCCGCCTATTATGAGAAGGTGGGCTtcagaggggtggaggagaagaaATCACTGGAGATATTACTGAAGGACAACCCACTGGATGTGGAGAAGCTGAGCACTTTCAGTCAGAGATTCCCTCTGCCCTCAATGTACAGGATCCATGTATGGAAAGTGCTGTTGGGTATCCTTCCTCCCCACAGTGACTCCCACTCCCTGGTGGGAGGGTACAGGCGGGAACAGTACCAGGATGTGTTGGAGGCCCTGAAGGTGATGAGGTTTGTCCACATGGCCACTCCCCAGACGCAGGTGTACCTACGCATGTTCCAGCTGGAGAGCCAAGTGCTGCCCAGACGCTCTGATACCTCAGCCCcgGACGAGGAGGATGAGGACTTCCTGTCCATAGCTCGAGCCATGGAGGAGATTGTAGAAGACCCTATGGATTGTTATTGGCTGATCAAGAGCTTTGTCAACCAGTTCAACAATAAGTTTGGAGACTCCATTCCCCACCTGCCCAAGAGTCTGGAGCACTACCTGAGTGTGGAGGAGCCCCGGCTACTGAACCATCTGAAGAATACTGGGGCCCTCGCCATGCTGCCATACAGCCTGTGGTTCAGGCGCTGCTTTGCTGGCTGCCTGCCTGAGTCCAGCCTGCAGAGGGTGTGGGACAAGGTGATCAGCGGGTCCTGTAAGATCCTGGTCTTCGTTGCCATGGAGATCCTTCTCAGCTACAAGATCGTGGTGATGGGGACCAGCAGACCGGAGGGAGTGGTCAGCATCCTGTGCAACATGCCCCAAGAGAACACTGACGCAATAGTGACTAAGGCCATTGACCTGTGGCACAAGTACTGTGGCACCCCCATGCACTCTGTATAGGATCACAGGTCTCCTGCCGGACCCTCTTGATGGGGTTGACATTGACATTGGGATACGCTTGGACtcaaatcaatcacatttatttgtcacatacttcgTAAAACAACAGATGTGGACTAGCAGTGCAATGGTTTCTTACGGGCCCTTccaaacaatgcagagagaaagagcataGAGAAATAATATAAAAGTAATAATATGTCTATATACACACACGGTGCCAGTTCCAAGTAGATCTGCAGGGGTataaggtaattgaggtagatatgttcatataactaggaataaagtgactagacaacagtatagatagtaaacagtagcagcagtgtatgtgatgagtgcctggtatagaggtcctggatggcagggagctcagccccagtgatgtactgagctgtacgcactaccctctgcagagCCTTGCGCTTGAATGCCAAGAAATTgacataccaggtggtgatgcagccagtcaagatgctcagTGGTatagctgtataactttttgaggatctgagagcccatgccaaatcttttcagcctccatgccaagtcttttcaaccTCTGACTGGAAGTGCTCTGAGGAACCACCGTGTTGAGGGTAAGTGTGGCGAATGTGTTGATGCCTACCATCAGCACCTGGGAGCAGcctgtcaggaaatccaggatccggttgcaaagggaggtgttcagtcccagagtccttagcttagtgttgagctttgagagcactatgatgttgaacactgagctgtagtcaatgaacaacattctcacatagctgTTCCCTTTGTCCAGGTGGAGAAGGGCAGTACCCCGTTGCAGAAAATTACAGATTTGGGCAATGTTAAATGCCTAAATTGGAAACGcaatggctgtacagtaacatgacatcagagctctggctctgcgcttcacttcgctgtatgggttttgactgacagccgttctgaacttgagcacctcgcacgacaagaagttgcccccatccctcccgctaattgggcaacttttgagggaaatgctgtaaattaagatTCTATGTATACTGAaaaaaatattaacgcaacatgaaacaatttaaaagattttacagagttacagttcatataaggaaatcagtcaatttaaataaatatattaggccctaatctatgggtttcacatgactgggcaggggtggagccatgggtgggcctgggagggcataccCACTGGGGGGCCAGGTCCAGTCAATCaaaattagtttttccccacaaaatagctttattacagacagaaatactcctcagtttcatcagctgtccaggtggctggtctcagacgatcccgcaggtgaagaagccgattgtggagatcctgggctggctTAGTTACATTAGGTCTGCggaattgtgttcattgtccatagcttatgcctgcccacacatgtgtaatgatcatgctgcttaatcagcttattgatatgccacacctgtcaagtggctGGATTATCTCGgcaaagagaaatgctcactagcagGGAGGTAAAAAAATGTGTGCCCAAAATTGAggagaaataagcttttcgtgCATATGGAAAATTTTGGGGATCTTTTAATTCCGCTTAtcaaatatgggaccaacactttacatgttgcgtttatatattaaTTCAGTATATTTTGAAAGATGAAACTTTGAGGATTTATAATAAATACCAaattgatgtcatacaagcaagccaaacaccctTGAGTcgaaaatgtgcacttcacatttccatgtCATAAACATTGACACTGTATAAGACAAGTTTTATGATCACTGTTttatgtacagttacaagatgacatgccGTCATACCCTGGGTTATTCTGAACAGAATGATCCTCGGTTTCtctattgtgaagaaaatttgcCACAGCGCACGCACCTGAATGCGctcatgactcctttctatgcGCACCAAAATTCTGATCCGTTTCCCTGAATTGCATTGTGAAAACCTTTTATAATGTCTTTGTCTAACACTGTAATATCATATTTTATACCTTTTCTAGTCATGTTGACAATGGAACAGGCTTtgaaatgatgcccacctgactcagattgcgatttataattGACCATTTTGGATTGCGTAAGTAACTGTAATTGTGTGATTTGCGGGGATGCAATGTTGTTCCAAACAAAATAACTACAGGTGTGCTTGCTGCTCTAGTTCCTGaatggcacagctaggagagctcaccttatagttgaagactcttctttaaatcataaaagtgcattgaaattacttagAAACTGTGCACCCTTTAGAAaggtgtggccacttggagataCCTGTTaatcctctcactcaaacccttgtaattTATTTGTCTTATGTGTtacctaccccacattttccaggaatattcttattgtgttactgaatgtatcaaGAACATTTTCAGATGTAGTTTTCAACAAATGTGACGCAAAGTACAGCATACAGTActagtaaaaagtttggacacacctactcattcaagggttttt

Function

symbol description
tbc1d7 Predicted to enable GTPase activator activity. Predicted to be involved in activation of GTPase activity; negative regulation of TOR signaling; and response to growth factor. Predicted to be located in cytoplasmic vesicle. Orthologous to human TBC1D7 (TBC1 domain family member 7).

NR:

description
TBC1 domain family member 7-like isoform X1

GO:      GO:0005097,GO:0032851

KEGG:

id description
K20396 TBC1D7; TBC1 domain family member 7

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036969191.1 True 3766 mRNA 0.45 8 35619919 35634039
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Neighbor

gene id symbol gene type direction distance location
wu:fi04e12 LOC106584072 coding upstream 1660 35582273 ~ 35618259 (+)
psmg4 psmg4 coding upstream 74484 35543507 ~ 35545435 (+)
LOC110521760 LOC100380722 coding upstream 127544 35405569 ~ 35492375 (+)
LOC110521757 NA coding upstream 429710 35181902 ~ 35190209 (+)
LOC118945793 NA coding upstream 503161 34960599 ~ 35116758 (+)
LOC110521768 sirt5 coding downstream 89857 35693310 ~ 35735400 (+)
LOC110521770 igfbp-1a2 coding downstream 166604 35800643 ~ 35805071 (+)
LOC110520994 LOC106584065 coding downstream 369270 36003309 ~ 36062700 (+)
LOC110520956 LOC106583994 coding downstream 804573 36438612 ~ 36489124 (+)
LOC110521776 LOC106584062 coding downstream 869112 36503151 ~ 36517233 (+)
G2228825 LOC105030512 non-coding upstream 13684 35605858 ~ 35606235 (+)
G2228785 NA non-coding upstream 88837 35530869 ~ 35531082 (+)
G2228782 NA non-coding upstream 94224 35525483 ~ 35525695 (+)
G2228660 NA non-coding upstream 143163 35473033 ~ 35476756 (+)
G2228814 NA non-coding downstream 918 35634957 ~ 35635306 (+)
G2228812 NA non-coding downstream 1524 35635563 ~ 35637191 (+)
G2228833 NA non-coding downstream 3984 35638023 ~ 35638479 (+)
G2228834 NA non-coding downstream 7403 35641442 ~ 35643876 (+)
G2228932 NA non-coding downstream 145438 35779477 ~ 35779757 (+)
G2228777 NA other upstream 100677 35518234 ~ 35519242 (+)
G2225948 NA other upstream 2015025 33572140 ~ 33604894 (+)
LOC110521703 LOC106584150 other upstream 4753397 30863624 ~ 30866524 (+)
G2220253 NA other upstream 6598037 29021586 ~ 29021882 (+)
insl5a rel3 other downstream 1950987 37584989 ~ 37587002 (+)
G2231371 NA other downstream 2689321 38315783 ~ 38336981 (+)
G2232661 LOC105030512 other downstream 3156276 38790315 ~ 38790675 (+)

Expression

tbc1d7(tbc1d7) Expression in all Baseline Samples

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The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 8.
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tbc1d7(tbc1d7) Expression in each Bioproject

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tbc1d7(tbc1d7) Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 100.
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Co-expression Network