LOC110521768 (sirt5)


Basic Information

Item Value
gene id LOC110521768
gene name sirt5
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050570.1
NCBI id CM025857.1
chromosome length 46327593
location 35693310 ~ 35735400 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036968987.1
TTcaatacagtaggtggcggtgtatgCACCTGAAAGTTGGATGCGATCTGCCAACTCAATCccaaaggagaagaagaggaagacatTTAAAATTACACACACCTCTTAACTAAACAGCTGAAACAGGTTAACCCTGATGATTGTACGTCAGTTCACCAGCAGAGGCGTCACCTCTCATCTGTGTGCCCGATTTAAAGAGACCCAGAACAGACCGGTCATGGCCAGACCCAGCTCAGACCTAGCAGCGTTCCGAGAGGTGTTCTCGAAAGCCAAACACGTGGCCATCTTGACGGGAGCAGGGGTTAGTGCTGAGAGTGGGGTCCCAACCTTCAGAGGAGAAGGAGGCTTCTGGAGGAAATGGCAAGCCCAGgACCTGGCCACCCCTGGTGCGTTCAGTCAGAACCCATCCAGGGTATGGGAGTTCTACCACTACCGCAGGGAGGTGATGCTGACGAAGAGCCCCAACTCGGCTCATGTGGCCATAGCAGAGTGTGAGGCCAGGCTGCAGAAACAGGGGCGCCGCGTCACCGTCATCACACAGAACATCGATGAGCTACATCGCCGAGCCGGATCCACCAACATTTTGGAGATGCACGGCAGTTTGTTTAACACCCGCTGTATGAGCTGTGGTCATGTTGGGGTTAACCACAAGAGCCCCATCTGTGCTGCCCTGGAGGGCAAAGGtgctccaGACCCTAACACCAGTGATGCTCAGATCCCTCCTCATGACTTACCCAGGTGTGAGCAGGGTGGCTGTAGTGGTCTGCTCAGGCCTAATGTGGTCTGGTTCGGGGAGACTCTGGACTCCGACATCCTGACTCGCGTTGAAGAGGAACTAGACCTCTGTGACCTCTGCCTAGTGGTAGGTACGTCCTCCATAGTGTACCCAGCAGCCATGTTTGCTCCCCAGGTGGCGGCTAGAGGAATACCTGTAGCTGAATTTAACATGGAGGAAACACCCGCCACCATGCGCTTCAGGTTCCACTTCCAGGGCCCCTGTGGGACCACCCTGCCCCCTGCACTGGCACGCCACAACAATGAGCCCTGACTTCCCCTGGCTGAGCCATAGCGCAGTATACATAGACCAGACTCTAGTGCTGGATGGGTGTGCTCgggtgtattcattagggcaAAACATTTAGCAACAGTTAACGTTTTGCAACACAAACAAGCCCTTATTGGACCATTTCAGGTTAGTCGCTCTTCGTTTCAGCCATCtgcttctgtttggttcctaaAGAATACACCCCAGTTTTGTGAATGTAATGTATGCTATAGAAAACAGACTGTGCTGACAATACCCCACACTCCATAGGCTACCACTCTGGATTTGTGTTATTGCATGAAATGACAACCATGTTAAAACAAATAAATCACAATTATGACATGTCGTCCGGTATCTCAAGCACAATGATTCCTTTTCCATTTGCCTTGGCATCTTCATCCAATATCAAAGCATTGTATCATGGTGGTCGTTGCATGTCAGATGGTACTTTTATCATATGTATAGATTATATATAAAATGTGGAAGGTTCATATCCGACCATAGATGCATTGTAAATGCTTTTTAAATCAGGTGTGTGCTGGCAGTAGAGGGCAGTGTTTAGCTCTCTTTGTGATTGTCTTTGTCTACAGATTCACTCCTACCTGCTGCATCTTATTGCCTGTTCATTGTaaaagagaatgtgttctcagtaaCCTACCTGATAATACATTAACTCTTATTGTCAGTTTGAGTGGTTCTGAAGCCTGGTTGTACTTTACTTCTGACTATTATATTTGTTCATTGGTGTGTCTGTGCCTtcaggatgactgggttagggatgGAGTAGGGGTTATGATAGCAACTACTCCATTTCTAGTGATgctgtgtgtcagtctgtgtgttaTTGCAGAGGGTCATGTTTATGTTATCACATTTTATTAGACTGTTTTAAGGACTAAGGGAAATTCATTGAACAGAAATACCAGGTGCTGTTGCTTTTTt
>XM_036968986.1
CTTGGAGAAATTCAACATGCAAAATGTGTCAGATTAAATCTATCTGAAAGTTAATGGTATTTAATCAGGGCATATTCATGTTGTATGGCAATGCTTCTTTGGATATGCGAAACATACATGCTGATAGTCGCTTGAAGAATATCAACAagtttaacgttagctagctaacagctaaACTTGAGTTGCATTCCATAGATAGCTATCTGTCGTATTTAGAGCTCACCTCGAGTACCATCTTTGCTTGCAAGTTGCATGAACAACAAATAGTCTCGAAAACCCGACCCTGTTGCCTAGGGTCGATTTTTGAGTCTAAAAGACTAACGACCCCCTTTACGCCCTTAAATGCACAAGGGTCAAAGAAAACCAGATAGCGAGCTACATTAGCTTGCTATGAATATTTACCCTTTGACGAGCCAGCGAGGTCTGCGCATGTCAGCAACGTTTCCAAGTTGTTACAGCAAGCAAGATCTCCAGTTAACCCTGATGATTGTACGTCAGTTCACCAGCAGAGGCGTCACCTCTCATCTGTGTGCCCGATTTAAAGAGACCCAGAACAGACCGGTCATGGCCAGACCCAGCTCAGACCTAGCAGCGTTCCGAGAGGTGTTCTCGAAAGCCAAACACGTGGCCATCTTGACGGGAGCAGGGGTTAGTGCTGAGAGTGGGGTCCCAACCTTCAGAGGAGAAGGAGGCTTCTGGAGGAAATGGCAAGCCCAGgACCTGGCCACCCCTGGTGCGTTCAGTCAGAACCCATCCAGGGTATGGGAGTTCTACCACTACCGCAGGGAGGTGATGCTGACGAAGAGCCCCAACTCGGCTCATGTGGCCATAGCAGAGTGTGAGGCCAGGCTGCAGAAACAGGGGCGCCGCGTCACCGTCATCACACAGAACATCGATGAGCTACATCGCCGAGCCGGATCCACCAACATTTTGGAGATGCACGGCAGTTTGTTTAACACCCGCTGTATGAGCTGTGGTCATGTTGGGGTTAACCACAAGAGCCCCATCTGTGCTGCCCTGGAGGGCAAAGGtgctccaGACCCTAACACCAGTGATGCTCAGATCCCTCCTCATGACTTACCCAGGTGTGAGCAGGGTGGCTGTAGTGGTCTGCTCAGGCCTAATGTGGTCTGGTTCGGGGAGACTCTGGACTCCGACATCCTGACTCGCGTTGAAGAGGAACTAGACCTCTGTGACCTCTGCCTAGTGGTAGGTACGTCCTCCATAGTGTACCCAGCAGCCATGTTTGCTCCCCAGGTGGCGGCTAGAGGAATACCTGTAGCTGAATTTAACATGGAGGAAACACCCGCCACCATGCGCTTCAGGTTCCACTTCCAGGGCCCCTGTGGGACCACCCTGCCCCCTGCACTGGCACGCCACAACAATGAGCCCTGACTTCCCCTGGCTGAGCCATAGCGCAGTATACATAGACCAGACTCTAGTGCTGGATGGGTGTGCTCgggtgtattcattagggcaAAACATTTAGCAACAGTTAACGTTTTGCAACACAAACAAGCCCTTATTGGACCATTTCAGGTTAGTCGCTCTTCGTTTCAGCCATCtgcttctgtttggttcctaaAGAATACACCCCAGTTTTGTGAATGTAATGTATGCTATAGAAAACAGACTGTGCTGACAATACCCCACACTCCATAGGCTACCACTCTGGATTTGTGTTATTGCATGAAATGACAACCATGTTAAAACAAATAAATCACAATTATGACATGTCGTCCGGTATCTCAAGCACAATGATTCCTTTTCCATTTGCCTTGGCATCTTCATCCAATATCAAAGCATTGTATCATGGTGGTCGTTGCATGTCAGATGGTACTTTTATCATATGTATAGATTATATATAAAATGTGGAAGGTTCATATCCGACCATAGATGCATTGTAAATGCTTTTTAAATCAGGTGTGTGCTGGCAGTAGAGGGCAGTGTTTAGCTCTCTTTGTGATTGTCTTTGTCTACAGATTCACTCCTACCTGCTGCATCTTATTGCCTGTTCATTGTaaaagagaatgtgttctcagtaaCCTACCTGATAATACATTAACTCTTATTGTCAGTTTGAGTGGTTCTGAAGCCTGGTTGTACTTTACTTCTGACTATTATATTTGTTCATTGGTGTGTCTGTGCCTtcaggatgactgggttagggatgGAGTAGGGGTTATGATAGCAACTACTCCATTTCTAGTGATgctgtgtgtcagtctgtgtgttaTTGCAGAGGGTCATGTTTATGTTATCACATTTTATTAGACTGTTTTAAGGACTAAGGGAAATTCATTGAACAGAAATACCAGGTGCTGTTGCTTTTTt
>TU2548634
ggtcgcaaagttcaagggggccgaatactttcgcaaggcactgTATATAAAATGTGGAAGGTTCATATCCGACCATAGATGCATTGTAAATGCTTTTTAAATCAGGTGTGTGCTGGCAGTAGAGGGCAGTGTTTAGCTCTCTTTGTGATTGTCTTTGTCTACAGATTCACTCCTACCTGCTGCATCTTATTGCCTGTTCATTGTaaaagagaatgtgttctcagtaaCCTACCTGATAATACATTAACTCTTATTGTCAGTTTGAGTGGTTCTGAAGCCTGGTTGTACTTTACTTCTGACTATTATATTTGTTCATTGGTGTGTCTGTGCCTtcaggatgactgggttagggatgGAGTAGGGGTTATGATAGCAACTACTCCATTTCTAGTGATgctgtgtgtcagtctgtgtgttaTTGCAGAGGGTCATGTTTATGTTATCACATTTTATTAGACTGTTTTAAGGACTAAGGGAAATTCATTGAACAGAAATACCAGGTGCTGTTGCTTTTTtaaatctgtctttctgtgttTTTTGCCTGCATGACatgtatgagagtgtgtgtgtcaagCAGTCAccatgtgggtgggtgtgtgttcaTAGAACTGTCAGAggaaatgtacactaccgtttaaaagtttggggtcacttagaaatatcattgtttttgaaagacgAGCACATTTATTTTATGTCCattttaaaatgacatcaaattaatcagaaatacagtgtggacgttgtaaatgactattgtagctggaaacggcagattttttttaatgacatatctacttaggcgtacagaggcccattatcagcaaccatcactcctgtgttccaatggcacattgtgttagctaatccaagtgtatcattttaaaaggctaattgatcattagaaaaccttttgcaattatgttagcacagctgaactgttgtcctgatttaaa

Function

symbol description
sirt5 Enables acyl binding activity and heterocyclic compound binding activity. Predicted to be involved in protein deacylation and regulation of ketone biosynthetic process. Predicted to be located in cytoplasm and nucleus. Predicted to be active in cytosol and mitochondrion. Is expressed in liver and retina. Orthologous to human SIRT5 (sirtuin 5).

NR:

description
unnamed protein product

GO:

id name namespace
GO:0036047 peptidyl-lysine demalonylation biological_process
GO:0036049 peptidyl-lysine desuccinylation biological_process
GO:0036054 protein-malonyllysine demalonylase activity molecular_function
GO:0036055 protein-succinyllysine desuccinylase activity molecular_function
GO:0070403 NAD+ binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036968987.1 False 1987 mRNA 0.48 9 35723896 35734960
XM_036968986.1 False 2334 mRNA 0.47 9 35724034 35734960
TU2548634 True 956 TUCP 0.38 2 35693310 35735400

Neighbor

gene id symbol gene type direction distance location
tbc1d7 tbc1d7 coding upstream 89857 35619919 ~ 35634039 (+)
wu:fi04e12 LOC106584072 coding upstream 105637 35582273 ~ 35618259 (+)
psmg4 psmg4 coding upstream 178461 35543507 ~ 35545435 (+)
LOC110521760 LOC100380722 coding upstream 231521 35405569 ~ 35492375 (+)
LOC110521757 NA coding upstream 533687 35181902 ~ 35190209 (+)
LOC110521770 igfbp-1a2 coding downstream 65683 35800643 ~ 35805071 (+)
LOC110520994 LOC106584065 coding downstream 268349 36003309 ~ 36062700 (+)
LOC110520956 LOC106583994 coding downstream 703652 36438612 ~ 36489124 (+)
LOC110521776 LOC106584062 coding downstream 768191 36503151 ~ 36517233 (+)
LOC118945799 NA coding downstream 779842 36514802 ~ 36516539 (+)
G2228834 NA non-coding upstream 80020 35641442 ~ 35643876 (+)
G2228833 NA non-coding upstream 85417 35638023 ~ 35638479 (+)
G2228812 NA non-coding upstream 86705 35635563 ~ 35637191 (+)
G2228814 NA non-coding upstream 88590 35634957 ~ 35635306 (+)
G2228932 NA non-coding downstream 44517 35779477 ~ 35779757 (+)
G2228942 NA non-coding downstream 64167 35799127 ~ 35799518 (+)
G2228968 NA non-coding downstream 109823 35844783 ~ 35846275 (+)
G2229262 NA non-coding downstream 165538 35900498 ~ 35902779 (+)
G2229268 NA non-coding downstream 175145 35910105 ~ 35910623 (+)
G2228777 NA other upstream 204654 35518234 ~ 35519242 (+)
G2225948 NA other upstream 2119002 33572140 ~ 33604894 (+)
LOC110521703 LOC106584150 other upstream 4857374 30863624 ~ 30866524 (+)
G2220253 NA other upstream 6702014 29021586 ~ 29021882 (+)
insl5a rel3 other downstream 1850066 37584989 ~ 37587002 (+)
G2231371 NA other downstream 2588400 38315783 ~ 38336981 (+)
G2232661 LOC105030512 other downstream 3055355 38790315 ~ 38790675 (+)
G2232855 LOC100380853 other downstream 3077690 38812650 ~ 38813379 (+)

Expression


Co-expression Network