LOC110521771 (igfbp-3a2)


Basic Information

Item Value
gene id LOC110521771
gene name igfbp-3a2
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050570.1
NCBI id CM025857.1
chromosome length 46327593
location 35810568 ~ 35873392 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021599618.2
AAAATAAAATAGATGGAGAAGGCTATCCGGCACTCTTTGACACGGAGAGTCCCCGTAAGCCTAGTTGACAACTCGCCTACTGTCCCTTTGTGACCAGCTTTTCGGCAGAATGCCCGGTCTATGCTTGTTTTGTCTCACTGCCGTGCTCGCTGCATTCACACGGTTCGCGGAGACCGTGGGGACGGTGGTCCGATGCGAGCCGTGTGACACCGTGGCTCTCATGCAGTGCAAGCCTCTGGCAAAAGACTGCGCCGACAGGGTAAGGGAGCCTGGCTGTGGGTGTTGTCTGACGTGCGCCCTTGCGGTGGGTCAGGCGTGTGGAGTGTACACCGGGCGCTGTGGCTCCGGGCTGACTTGTCAGCACCAACCCGGGGAGACCCGACCACTGCAAGCCCTGCTAGAGGGACGGGGAGCGTGCTCCAGCGTCGCGTCCAAAACACTCAGCCCCATTCTGCTCCCCACAGAGAAACAAGagaacacaggcagggagcaggtggTGGCGGGGGAAGAGTGGCATACCAATGTCACCGTGATGACTACCATGGCGGTGGGTGTGGTTGTTGTTGAAGGCGGAGGCGGAGGCGGCAAACACCGAGTGGCGATAGAGGCCAAACCGCCGCTGCAACCCAAGCTGGATGTGATCAAGAAGGAGCAGAATAAGAAGAGCCAGAGCTACAAGATGGAGTCAGGATCTGGGGGAGTCAAAGCCAACATTCCCAGGTTTTCTCTGGAGGACAAGAGGGAGACCGAATATGGcccatgcaggagagagatggagagcattCTGAACAGTCTTAAAATCTCCAATGTGCTCATCCCCAGAGGCGTCCGCATCCCCAACTGTGACAAAAAAGGCTTCTACAAGAAAAAACAAtgccgTCCATCCAAAGGGAGGAAGCGAGGTTACTGCTGGTGTGTGGATAAGTACGGTCAGCCTCTCCCCAGCTAcgatggaaaggagagaggagaatccCAGTGCAACAACCTGGAGAACAaatgagaagcagagagagagtggatggatggagagaaagaacgaagcaaggaggagagaggaataggAGAGAGACTTGTTTTCACTCCGGCCCTTCACAAAGCACAGTCAAAAGAGCTTCAGACTGTTGACCTCAGGTCACATGAC

Function

NR:

description
insulin-like growth factor binding protein 3 paralog A2

GO:

id name namespace
GO:0001558 regulation of cell growth biological_process
GO:0005576 extracellular region cellular_component
GO:0005520 insulin-like growth factor binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021599618.2 True 1141 mRNA 0.55 4 35810568 35873392

Neighbor

gene id symbol gene type direction distance location
phactr1 LOC106584070 coding downstream 92713 35642397 ~ 35717855 (-)
LOC110520993 LOC106584074 coding downstream 233521 35545576 ~ 35577047 (-)
LOC110521763 LOC106584075 coding downstream 296176 35499988 ~ 35514392 (-)
irf4l irf4 coding downstream 309830 35493954 ~ 35500738 (-)
LOC110521759 LOC106584097 coding downstream 590879 35216708 ~ 35219689 (-)
LOC110521773 LOC106584067 coding upstream 27083 35900475 ~ 35966970 (-)
LOC118945798 NA coding upstream 45519 35918911 ~ 35920667 (-)
LOC110521774 LOC106584064 coding upstream 397720 36271112 ~ 36275588 (-)
zc3h3 LOC106584063 coding upstream 411454 36284846 ~ 36368490 (-)
LOC110521777 LOC106584061 coding upstream 650067 36520352 ~ 36541228 (-)
G2229179 NA non-coding downstream 3983 35806097 ~ 35806585 (-)
G2229176 NA non-coding downstream 10097 35800116 ~ 35800471 (-)
G2229169 NA non-coding downstream 23589 35786535 ~ 35786979 (-)
G2229165 NA non-coding downstream 30163 35779999 ~ 35780405 (-)
G2229064 NA non-coding downstream 172955 35636594 ~ 35637613 (-)
G2229231 NA non-coding upstream 5015 35878407 ~ 35878653 (-)
G2229354 NA non-coding upstream 97373 35970765 ~ 35971011 (-)
G2229366 NA non-coding upstream 105603 35978995 ~ 35979398 (-)
G2229377 NA non-coding upstream 111594 35984986 ~ 35985217 (-)
G2229175 NA other downstream 11211 35798804 ~ 35799357 (-)
G2227801 NA other downstream 1267949 34542217 ~ 34542619 (-)
G2227478 NA other downstream 1486913 34311142 ~ 34323655 (-)
G2226745 NA other downstream 2000674 33809379 ~ 33809894 (-)
LOC110521741 LOC106584188 other downstream 2108125 33686041 ~ 33710890 (-)
G2229647 NA other upstream 339754 36213146 ~ 36214385 (-)
LOC110521791 LOC106584041 other upstream 1627818 37498832 ~ 37523064 (-)
G2232820 NA other upstream 2892030 38765422 ~ 38767903 (-)
LOC110521806 NA other upstream 2965514 38838904 ~ 38856693 (-)

Expression


Co-expression Network