zc3h3 (LOC106584063)


Basic Information

Item Value
gene id zc3h3
gene name LOC106584063
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050570.1
NCBI id CM025857.1
chromosome length 46327593
location 36284846 ~ 36368490 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021599624.2
TgattttgtggctgtggtaacgatCAAACTCCTCAACACGTAATCTATAATTGCGTCGCTGGATGATGACGTTTGAGTTTAGGACATAAACAACATGGATGAGAGAGAAGCGCTGAAAAGGCAAATCGATCTGTTGCAAAATCTCATCAATAACCATAGAAGTATCCATGGGGATGCCCCTTCTTGTTCTGGCCAGCAGTGGCACCCAGCGAGACCACCAGCCCGAGGCAGGAGTCACAGCTCATTTTTCAGCCCCACATTCCCCTCGCGTGGTGGGCCTCACCCCCCTCAACCCACAGGACACTGGAGGAAGAGCTACACCCTCAGTAGCAAGACCAGCTCATCCCAGCACAGTAGACCTACTACACAGACTGCCAAGCCCTCTCTAGAGCAGCAGGGTAGACCAATACAGATTACCAAGCCCTCTTTAGATTCTGTGGCACCCAACTCCTCTACTGGATTCCTGTCCCTTCATGCTACAGATACCTTACAGCCCAGCCACAGCAGTAAGGGCCCAgctagaggagagaaggatggaacaAAATGGGCTACGTCTAGGGATCTAACAGGGCCAAGGGGCCAGCAGTACGCACTCACAGGGGGAGTGAGAAGATCTATGACGGGGACAGGCAGTGGATCCAcagctatagagacagagactgaaCCCGGCAGAGGAAGGACAGGACCTGGGGGCAAGGCTGGGCTGGGAGTTTCGGCGAAGAGCTTAGGACTGGGACTGCCTCTGATAATGACCGCCCCTGGACAAATGGACTTGTCAGGTGTCCCTGCCAAAACGACCACCACTGCCACCAGGGTTCAGAGCACTGCTCAGCTACATATTAAACATTGCGTGACTGGGAAAACCAATACAGCAGCTAAGCAGGTTGTCCCCAAGGCAACCTCCAACAGCAACCCCACCCCTAGCGATGCCAATTCACTTCCTctacctcttccacctcctctctctgctccccctagTGCCTCTCTCAGTCCCAGGTCCAAGCTCaccccagcccagccagcctCCTCTCCCCAGAACCACTCCAAGTTTACCTGGGTGAAGAGCCATCAGCCAGGAGGAGTCAGGCCCAGCCAGGCCAGAATAGAGTCCCGGCCCCCAGAAAATCTAATCACATCTGTCACCACCACAGTCTCCCATTCTGGGGTCCCTAGCAGTTTCTCATCCAGCCCCAGTTCCAGTAGGAAAGCCTTTGCCCCCAGAAAAAAGGTTCCCCGTAGGCTCAGTTTATCCACTGCAGTCCCTAAGACCTCCAAGTACACCTGGGTGTCCTCTGCTGCAGGGGTCCAGGCTAGGCTGTCCCGGAAGCCTCTCTCACCCAAAGACCTggccctggctctggctctgccCCAGAGAGCTGCAGAGGGGTTCGTTGCCAAGAAACCAAAATCCCCAAATACTTTAGCCAAGCAGCGTAAGGCAGCAGCGGCCTCCTGCTCCACTACCCTCAGTAGTCGCTACTGCTGGAAGGCAGGTTCTGGGGGAGGGGGGCAGACTGGCTCCGGGACAGGGTCCAGAGTTGGGTCTCTGTTCCGCTGGACCTCAGAGAAAGAGAATGGGGCCAAGGGGGGGTCTAGTGTCCCTCCATCTGTAACTCAACGCACCGCCTCCTCTTCCCCTGGGGGGTTCAAACTCAGGAGCAGGATGAAGATCATCAGGAGGTCAGTTAGCagTGGGTCTGGGGCAGAACGGAGATCCAGCCCAGCAGCCATGACCCTGATCAGCCGCTACTCTCTGCGCCTTAGGACACACACTCCGGTCCGGACACAAACTGCAGTGAGGACACGCACCCTTATCCAGAGCCCGGGGGGTGTGAAGAGGACCCCGTCCCTTGAACTGGTCTCATTTGGCAGACACAAGCTACGACGTCTCTCCCCCAACCCCTCCAGGACAGGTCCCGCCTCTCTGTCGATGCATAGCCAATTGTCTCAGCGGGTTTTCAGGACACGCTATAAGATAGTGACGCGCCTGGGCGGAGCCACCTCGCACACACCCCACTATAGCCACGCCCTCTCCTGGAGAGCCAAGAGGATCCATACGGCCAGgagtgTGCTCCAGAGTCGTCTGCGTCCCCCCGGACAGGACAGGCACCCCCCGGCCCAACACTGGACAGGCAGAGGGCTGGGCATGCGCTGGATTGGCGGAAACCTTTACAGCGTCTCAGCCAATAAGCTGTCCCGCACTGTGACAACCAGTGCGCCAATCAACAGGacagTGCGGTTGTCCAGTCCACAGGAAGTCTCCCACACCACCTCTAGCACTCTCATCCGGCCCTCCAGCACTCGTTTTGTGGCTAGTCGTGCGGTTCAGAGGAGTCTAGCCATCATCAGGCATGCTCGTCAGAAGAAGTCCCAGAAGCAGTACTGTATGTACTACAACCGCTTTGGCAAGTGTAACCGTGGCAACACCTGCCCCTACATCCACGATCCTGATAAGGTGGCTGTctgtaccagGTTCCTGAGGGGTACGTGTAAGCAGACAGGTGGGACCTGTCCATTCTCCCATAAGGTGGCCAAGGAGAAGatGCCTGTGTGTTCGTACTTCCTGAAGGGTATATGTAACAACAGTAGCTGTCCCTACAGCCATGTCTATGTGTCCCGCAAGGCTGCTTTGTGCCAGGACTTCATCAGGGGATACTGCCCTCAGGGAGAGAAGtgtAAGAAGAAGCACACCCTGGTGTGTCCAGACTTCTCCAGTAGCGGCTCCTGTCCTCGAGGGGCCCAGTGTAAGCTCCAGCACCGTCAGAGGGCCAAACGCACCgctcctaaccccaaccccaccaCAGGCCCCTCCGCTGCCCCGGCCAAGAAGGCCCGCACCAAGAGgcCTAGCCTGTCAGTGGTCCTACCTGATAACCAGACGGCAGAGGGTTCTGCTCAGGCAGATCCAGGGGCACCCTCGTCTTCTTCCTCGGGTCCTCACAAGACCAAGCTCCCGTCGttcatctccctctctagctccccCGAAGACACAGACGCCCCGGACACGCCCCCTGCCGACGGGGCAGAGGTCACAGAGAGAATACTGCAGATCAAGCCTCGACTCTAGAACTACAGGAACTAGAATGGATACTGCCTGAACACCAAATGAGCTGTGAAAATACTACAGAGACGTATGTATTGAATGCTTATGGAAGCTCTGACGTTTCTCAGACCCATAACTGTATCTGCTCTCAACCATACTCAGGGTCTTTAATGTAGCTAAAAGTTTGCTTTATGGACTCATACATTTCATACAGCAATGATGTTTGTAATGCAGATTGAATTGAtatttgtttttttgtaaattgtagCTTGATGAATTTCGAATAAAATGTATGTTATTACTACTGTA

Function

NR:

description
zinc finger CCCH domain-containing protein 3-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021599624.2 True 3352 mRNA 0.55 12 36284846 36368490

Neighbor

gene id symbol gene type direction distance location
LOC110521774 LOC106584064 coding downstream 9258 36271112 ~ 36275588 (-)
LOC110521773 LOC106584067 coding downstream 317876 35900475 ~ 35966970 (-)
LOC118945798 NA coding downstream 364179 35918911 ~ 35920667 (-)
LOC110521771 igfbp-3a2 coding downstream 411454 35810568 ~ 35873392 (-)
phactr1 LOC106584070 coding downstream 566991 35642397 ~ 35717855 (-)
LOC110521777 LOC106584061 coding upstream 154969 36520352 ~ 36541228 (-)
LOC110520995 LOC106584060 coding upstream 202588 36571078 ~ 36597415 (-)
LOC110521778 LOC106584059 coding upstream 234706 36603196 ~ 36614084 (-)
LOC110521779 LOC106560432 coding upstream 265028 36633518 ~ 36643925 (-)
LOC110521780 LOC106584056 coding upstream 276066 36644556 ~ 36660835 (-)
G2229535 NA non-coding downstream 183534 36100824 ~ 36101312 (-)
G2229496 NA non-coding downstream 199820 36084803 ~ 36085026 (-)
G2229466 NA non-coding downstream 243958 36036590 ~ 36040888 (-)
G2229377 NA non-coding downstream 299629 35984986 ~ 35985217 (-)
G2230176 NA non-coding upstream 120793 36489283 ~ 36502092 (-)
G2230188 LOC106584062 non-coding upstream 143203 36511693 ~ 36517232 (-)
G2230235 NA non-coding upstream 255065 36623555 ~ 36623791 (-)
G2230238 NA non-coding upstream 261223 36629713 ~ 36629990 (-)
G2230260 LOC106584055 non-coding upstream 307695 36676185 ~ 36682460 (-)
G2229647 NA other downstream 70461 36213146 ~ 36214385 (-)
G2229175 NA other downstream 485489 35798804 ~ 35799357 (-)
G2227801 NA other downstream 1742227 34542217 ~ 34542619 (-)
G2227478 NA other downstream 1961191 34311142 ~ 34323655 (-)
G2226745 NA other downstream 2474952 33809379 ~ 33809894 (-)
LOC110521791 LOC106584041 other upstream 1132720 37498832 ~ 37523064 (-)
G2232820 NA other upstream 2396932 38765422 ~ 38767903 (-)
LOC110521806 NA other upstream 2470416 38838904 ~ 38856693 (-)
G2234611 NA other upstream 3588425 39956915 ~ 39993914 (-)

Expression


Co-expression Network