LOC110520956 (LOC106583994)


Basic Information

Item Value
gene id LOC110520956
gene name LOC106583994
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050570.1
NCBI id CM025857.1
chromosome length 46327593
location 36438612 ~ 36489124 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036968941.1
ATGTCTATCGGGCTGGTGCTGGAGGATAGAGTGAACAAACAGGACTCAGACCCGCCTGGCTTTGGTGCACTCACCAACAGGCTGGAAAACCAGGGGTTGGTGCTGCGTCTGGTGCTGGGACTGTGGGCCTGGAAGCAACAGGAACCGGGAACCAGGAGGAAAGACAACTTGAAGAGCAAGCAGACACACAAGGGAGCCCGAGACCCAGGGgtGGAGGCCATCCATCCAGACTGTGCCTTGGTGTCCCAACACATGAAGGCCCAGCAGACCTGTATCCACACACGCAGACAGGAGGGTCGCAACCGTTCTGCCAGGACAGGGTGTCGTACGGAGTGGGATGAGGTCAGGTGCTGGTACCGGGCTGATGTGGGCCAGATTGTCAATGTGTCTTGCTCAGACATCTCCCAGCTCTTCGCCAACAAAGGTTACATCTTCAGGAACTGTTCGAAGGATGGCTGGACAGAGCTGTACCCTACATATGAGGAGGCCTGTGAGTTCGCAGAGGAGTCAGAGACAGGATCACAGACAACATACTTTTTGACCATCAGTCAGGTGTACACTGCTGGATACGCcacctccctcatctccctcataTCAGCCATTTTTGTATTCGCTGTGTTCAGGAAGTTCCACTGTACCAGGAACTACATCCACATCAACCTCTTCTCCTCGTTCATCCTGAGAGCCAGTGCCGTCTTCATCAAGGATGGGGTTCTTTTTGCTGATGAGAACTTCGACCACTGCTTCATGTCCACTACGGCGTGTAAATCAGCAGTGGCGTTCTTCCAGTTCAGCATCCTGGCTAACTACTTCTGGTTGTTGGTCGAGGGCATGTACCTCCAGACCCTCCTTGCCCTCACCTTTGTCTCACACAATAAGTACTTCTGGTGGTACACACTCATCGGCTGGGGTCTCCCAACCACAGTATTGTTGGTGTGGGTTCTGACACGAAACTTCTATGATAACAGAGGTTGCTGGGACGACACCGATGTGGCCTTCATTTGGTGGATTATCAAAGGGCCTATAACTGCATCACTGCTGGTCAACTTCATCATCTTCATTAATGTGATCCGTATACTGGTCCAGAAGCTAAAATCTCCCGGTGTCAGGGGACACAAAACAGGCCACTTCAtaagGCTGGCTAAGTCCACCCTGTTCCTGATCCCTCTGTTTGGGATGCATTACATGGTGTTTGCCTTCCTACCAGAGAACACAGGAGAGGAGGCACGCATCTTCATAGAGCTGGGTCTGGGATCCTTCCAgGGCTTTGTTGTGGCTCTGCTCTACTGTTTCCTGAATGGAGAAgtgcaGGCGGAGCTGAAGAAGCGTCTGTGGAAGTGGCAGACCCAGGGCTATATGAGCTACAGTAGGAGAAGACGCACCCTATTCACAGAGAGCTCCACCGTCACACAGATCTCTGTGCTGGAGAAGTCCTCCCCCAAGGAACTGCCCTGCATCAgtgacacatacacactcacacacaccgacacacacacacccacaaacagcTCTGTCTCAATCTGTGacgacacacacaccctaacacacaaCTCTGATTCCACctgcactaacacactcacactgtctgAGTGAACAAAAATTAAATggtctctcctttccttctccttgTCCTGCAATCGCCAAATATCAGATAGAACTGTCTCTAGAGAGGTCTCTCTTTGAATGTTGTTCTATAGATTGTGGTATCTGTTGTGTTGACTGATTGGCTTGGCTGGGGGGTTCCATAGACTGACAAAGAACTCTACAGGAAAATCCTTGAGTCCCTatatcacaattgccacagtttGACCAGATTCCCAACTGAAGCAACCCTTATAGTatctacaatatacagtatatttcatAGTACAATGATATACACAGCCTTGTGTGTCAGGGCATTTCGAACTGTGCTGTGTTTGGGTTGTTTGCTGGTATTTCTGCCAGACATGGGCTTGAATCCAGAGTAGTAAGAAATCAAACAGTGCCTGCATCTGAAATGGAAAATTATTCCCTATATCGTCCATGTTAAACTGACCTCTCTCCCCTCATCAACCTGAAGTGTACAGAGAAGAACAACCActtatcagtggtggaaaaagtacccaattttcatacttgagtaaaagtaaacgATACCTTAATGGAAAACTACTAAAGTAAAtttgaaagtcacccagtaaaataata

Function

NR:

description
PREDICTED: pituitary adenylate cyclase-activating polypeptide type I receptor-like

GO: NA

KEGG:

id description
K04587 ADCYAP1R1, PACAPRI; pituitary adenylate cyclase-activating polypeptide type I receptor

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036968941.1 True 2190 mRNA 0.49 14 36438612 36489124
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110520994 LOC106584065 coding upstream 375912 36003309 ~ 36062700 (+)
LOC110521770 igfbp-1a2 coding upstream 633541 35800643 ~ 35805071 (+)
LOC110521768 sirt5 coding upstream 703652 35693310 ~ 35735400 (+)
tbc1d7 tbc1d7 coding upstream 804573 35619919 ~ 35634039 (+)
wu:fi04e12 LOC106584072 coding upstream 820353 35582273 ~ 35618259 (+)
LOC110521776 LOC106584062 coding downstream 14027 36503151 ~ 36517233 (+)
LOC118945799 NA coding downstream 25678 36514802 ~ 36516539 (+)
LOC110521781 LOC106584055 coding downstream 187033 36676157 ~ 36685931 (+)
LOC110521782 LOC106584054 coding downstream 202292 36691416 ~ 36705489 (+)
LOC118945913 NA coding downstream 212246 36701370 ~ 36701505 (+)
G2229564 NA non-coding upstream 279705 36158642 ~ 36158907 (+)
G2229561 NA non-coding upstream 282504 36155686 ~ 36156108 (+)
G2229398 NA non-coding upstream 371423 36064230 ~ 36067189 (+)
G2229381 NA non-coding upstream 449635 35988738 ~ 35988977 (+)
G2229355 NA non-coding upstream 467357 35971036 ~ 35971255 (+)
G2229959 NA non-coding downstream 31223 36520347 ~ 36523684 (+)
G2230040 NA non-coding downstream 137891 36627015 ~ 36627235 (+)
G2230020 NA non-coding downstream 155466 36644590 ~ 36647937 (+)
G2230283 NA non-coding downstream 258300 36747424 ~ 36747831 (+)
LOC110520996 stxbp3 non-coding downstream 274001 36760942 ~ 36767311 (+)
G2228777 NA other upstream 919370 35518234 ~ 35519242 (+)
LOC110521757 NA other upstream 1248461 35181902 ~ 35190209 (+)
G2225948 NA other upstream 2833718 33572140 ~ 33604894 (+)
insl5a rel3 other downstream 1095902 37584989 ~ 37587002 (+)
G2231371 NA other downstream 1834236 38315783 ~ 38336981 (+)
G2232661 LOC105030512 other downstream 2301191 38790315 ~ 38790675 (+)
G2232855 LOC100380853 other downstream 2323526 38812650 ~ 38813379 (+)
LOC110521001 LOC106584026 other downstream 2685522 39117484 ~ 39202411 (+)

Expression

LOC110520956(LOC106583994) Expression in all Baseline Samples

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The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 0.2.
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LOC110520956(LOC106583994) Expression in each Bioproject

Bar chart with 15 bars.
LOC110520956(LOC106583994) Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 3.
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Co-expression Network