LOC110521776 (LOC106584062)


Basic Information

Item Value
gene id LOC110521776
gene name LOC106584062
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050570.1
NCBI id CM025857.1
chromosome length 46327593
location 36503151 ~ 36517233 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021599626.2
GTTATCGGAGTAGCACACACCCAGTCCCAAGTATGAACGCACACAACAGTGGTTATTATGACATTACTTTGGAAGCAGAGAGATAGGGAGCAGGTTACAGAGAAATCACTGGCACGTCATTCCTCTGTTTAGTTTCTGTGTGCTTTTTTTTGAGTCAGTTACACTTGTAGTGAGATGAGCAAATTACTTCATTCTTCTGTTTTGGAATGGTTGGACATAAATACTTTTTTGATTTTCCTCTGTGTTTTCTTGGTACTTGCCGACCTCCTGAAAAACAAAACTCCGAAGAATTTTCCTCCTGGACCTTGGTCATGGCCTTTCATTGGCAACATGTTTCAATTTGATCCTGCTAAGATGCATCTTCAGTTTGAAGAGTGTGAAAAAAAATATGGAAAGATTTTCAGCCTTCGAATTCCATCAGCAAACCAAGGGTCAAAGTGGGTTATTCTGAGTGGATACGAGATGGTGAAAGAGGCCTTGGTCCACAATGGCGACAGTTTTGTCGATCGTCCCTCCATTCCCTTATTTGAAGATATATATATTGGAAGTCAAGCAATGGGAAGTAAAGgtgtgGTTATGTCGAACGGGTATCCATGGAAGCAACAGAGGAGGTTTGCTCTCTCTACACTGAGGAACTTTGGACTGGGCAAGAAGAGTCTGGAGCCATCCATCCAGATTGAAGCGCAGTGTTTGAATGAAGCCATTCAGAGTGAACAAGGAAAACCCTTCAGCCCCCAGATACTGATGAACAATGCTGTTTCCAATGTGATCTGCTGTCTTGTGTTTGGTGCCCGCTTTGAATACAGCGATGACCAATTCCAAACCCTCCTGAAAACAATGAACGAGATTATTTACTTGGAAGGGGGCTTTTGGGCCGGGATGTATAACATGATGCCGTGGGTCATGCGTCGGGTTCCTGGTCCTCACAGAAGGATCTTCACTGGCTGGAAGGAGGTCATCTCCTTCATCAACATCAGGATTCAGGAGCACATGAAGGACAATGACCCCTCGTCCCCAAGAGACTTCATCGACTGCTTCCTCAACGAGATAGAGAAGTGTGAAGATGACACAAGGGCTGGGTTCAACTTGGAGAACTTGTCCTTCTGCACTCTGGATCTATTTGTGGCTGGGACAGagaccacctctaccaccctctatTGGGGCCTTCTGTTTATGATCAACTACCCGGAGATACAAGCCAAGGTGCAGGCAGAGATCGATGCAGTTGTTAGGTCGTCGCGGCAGCCCTCCATGGAAGACAGGAACCGCATGCCCTACACAGACGCAGTCATCCATGAGACACAGAGGATGGGGAATATCATACCGCTCAACGTGTCCCGCATGGCCACTAAAGACACTGAGGTTGGAGGATACACCATCCCTAAGaACACCATTGTGCTTGGCACCCTCCAGTCGATCCTGTTTGATGAGTCAGAGTGGGAGACCCCTCACACCTTCAACCCGGGACACTTCCTGGATCAGGAGGGCAAGTTCAGGAAGAGAGACGCATTCCTTCCATTCTCTTTGGGTAAGAGGGTGTGTCCTGGGGAGCAGCTAGCCAAGATGGAACTCTTCCTGTTCTTCACCTCCCTGCTGCAGAGGTtcaccttcttctctcccccaggGGTGGAACCCAGCCTGGACTTTCAGATGGGGTTTACACACAGTCCCAAGCCTTACCAGCTGTGTGCAACACCTCGATGAGTCTTCCACAGCTGCCCTATTCATTATGTTGCTGGGGTTTAAAAATTAATTATTGGAGGGCCAAGTGTCTGAAGGTTCAcacctcccttgtacttgattgatcaaCTAAGGTAATTGATTAAAACTTCCTTTGCCTGGTTGCTTaggttttaaattgacacaaatGAAAAGGAAATGAAGTCTTTCTTAACACCAAACAACTGAAAAGGCTGCAGATGGAGAAAACACACTCACGTAGTGACACTACACATACCAATAATACTCTACATATCAAGATCTCAAACCATATGTTGTAGTCCTAGATTAAACTTGAATAAGAAGGACATATTTGATTGAAAATCTAAAACACTCCTACATTATCAATGTAAATGTACATAATTTACAATGTAAACATACTACATGTCTTTCATGTATATGGCATATCTGAATGTATTTGACCCATGGTCTGGTGGATTGTGATTTCTTCTGTACCTTTTTATTTTCTATCAAGGCAATATACACTACAATATACA

Function

NR:

description
cytochrome P450 2J2-like

GO:

id name namespace
GO:0055114 oxidation-reduction process biological_process
GO:0016712 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen molecular_function
GO:0005506 iron ion binding molecular_function
GO:0020037 heme binding molecular_function

KEGG:

id description
K07418 CYP2J; cytochrome P450 family 2 subfamily J

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021599626.2 True 2216 mRNA 0.45 9 36503151 36517233
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110520956 LOC106583994 coding upstream 14027 36438612 ~ 36489124 (+)
LOC110520994 LOC106584065 coding upstream 440451 36003309 ~ 36062700 (+)
LOC110521770 igfbp-1a2 coding upstream 698080 35800643 ~ 35805071 (+)
LOC110521768 sirt5 coding upstream 768191 35693310 ~ 35735400 (+)
tbc1d7 tbc1d7 coding upstream 869112 35619919 ~ 35634039 (+)
LOC110521781 LOC106584055 coding downstream 158924 36676157 ~ 36685931 (+)
LOC110521782 LOC106584054 coding downstream 174183 36691416 ~ 36705489 (+)
LOC118945913 NA coding downstream 184137 36701370 ~ 36701505 (+)
LOC118945805 LOC106584052 coding downstream 218692 36735925 ~ 36740556 (+)
LOC110520996 stxbp3 coding downstream 243709 36760942 ~ 36767311 (+)
G2229564 NA non-coding upstream 344244 36158642 ~ 36158907 (+)
G2229561 NA non-coding upstream 347043 36155686 ~ 36156108 (+)
G2229398 NA non-coding upstream 435962 36064230 ~ 36067189 (+)
G2229381 NA non-coding upstream 514174 35988738 ~ 35988977 (+)
G2229355 NA non-coding upstream 531896 35971036 ~ 35971255 (+)
G2229959 NA non-coding downstream 3114 36520347 ~ 36523684 (+)
G2230040 NA non-coding downstream 109782 36627015 ~ 36627235 (+)
G2230020 NA non-coding downstream 127357 36644590 ~ 36647937 (+)
G2230283 NA non-coding downstream 230191 36747424 ~ 36747831 (+)
G2228777 NA other upstream 983909 35518234 ~ 35519242 (+)
LOC110521757 NA other upstream 1313000 35181902 ~ 35190209 (+)
G2225948 NA other upstream 2898257 33572140 ~ 33604894 (+)
insl5a rel3 other downstream 1067793 37584989 ~ 37587002 (+)
G2231371 NA other downstream 1806127 38315783 ~ 38336981 (+)
G2232661 LOC105030512 other downstream 2273082 38790315 ~ 38790675 (+)
G2232855 LOC100380853 other downstream 2295417 38812650 ~ 38813379 (+)
LOC110521001 LOC106584026 other downstream 2657413 39117484 ~ 39202411 (+)

Expression

LOC110521776(LOC106584062) Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 300.
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LOC110521776(LOC106584062) Expression in each Bioproject

Bar chart with 21 bars.
LOC110521776(LOC106584062) Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 7500.
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Co-expression Network