LOC110521781 (LOC106584055)


Basic Information

Item Value
gene id LOC110521781
gene name LOC106584055
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050570.1
NCBI id CM025857.1
chromosome length 46327593
location 36676157 ~ 36685931 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036968902.1
CTGCATCAGGAGAAAAATGCGATCAAACCCCGGAAACGGAAATCTTAGCAAAATGAATTCAGATTTTTTAAACAGCTaattattttatatttgtgaCCGGGCCGTTGAAGATTATATAGGTTGTTTTACAGATTGATACCTGTAACAGTACACATGGCAGTGGCAGGTAAAAATGACTTTGCAGTTCTCAACACCGGGCGGAAAATGCCTCTCCTCGGTCTAGGAACATGGAAGAGCGAACCTGGCAAGGTAAAACAGGCAGTGGTTTGGGCTTTGCAGGCTGGCTACCGTCACATCGACTGTGCTGCCATCTATGGCAACGAGGTGGAAATTGGCGAGGCTCTGCAGGAGACACTTGGCCCTGACAAAGCCCTGAGGCGAGAGGATGTGTTTATCACCTCTAAGCTGTGGAACACACAGCATCACCCAGAGGATGTTGAGCCCGCTCTGCTTAAGACACTGAAGGAGCTGAGGCTGGAGTACCTGGATCTCTACCTCATCCACTGGCCCTACGCTTTCCAACAAGGTGACGCTCCTTTCCCTAAGTCAGAGGACGGCACCCTGCTGTATGACGACATCGACTACAAGCTGACTTGGGCTGCCATGGAGAAGCTGGTGGGAAAGGGCATGATCAGGGCTATCGGCCTGTCCAACTTCAACAGCAGACAGATAGACGACGTGCTGTCTGTAGCCAACATCAAACCCACTGTGCTTCAGGTGGAAAGCCATCCGTATCTGGCTCAGGTGTTGTTGCTGCAACACTGCCGGGACAGGGGCCTGGTGATGACAGCGTACAGCCCACTGGGGTCACCGGATCGGGCATGGAAGCATCCTGACGAGCCCGTCCTCCTGGATGAACCAGCCATCGGCACCTTGGCCAAGAAGTACAACAAGTCCCCAGCACAAATTATCATTAGATGGCAGACGCAGCGAGGAGTGGTGACGATCCCTAAAAGTGTGACAGAGGCTCGGATCAAAGAGAATATCCAGGTGTTTGACTTTACCCTTGCAGCAGAAGAGATGAAGTGTATAACAGCATTGAACAAAGGCTGGCGCTACATTGTACCAACCATCACAGTTGATGGGAAGCCCGTCCCCAGGGATGCAGGACATCCACACTACCCCTTCATTGACCCCTACTGAGTAAATCCCCAACTGCTGCCCACTTGTGCCttgggaaccccccccccccttcctcaacCCCATCCTAGGCTGTGTCCCAATTAAATAGCTTCATTTTGTCATAATCCTCCTGAGTGACAACTGATTTGAGAAGTATTATTTTTAGGGGAAAGAAGGTTGGTAGAAAAAGTCCAGCTCCTGTCAGATCAGTTTTCATGGTGGTGAGGTGGCGGGGAAAGAGTGCTTTAGAGTGTATTAGGACATAGCATCTGTGTTCTTCGTAATAAAAATGTTTTGTTACTGCCCTTGAA
>XM_021599636.2
GGTAGAAAATCTGcaaataaaatataattggaATAGATTCTGTTCTCAATCGTGTCAAATGTAATGTAAAACAGGTGAGATGATTAAAGAGATACATTACGTTAAACGTAATGTAGGCGAAGGGAATGTCAGTGAAATGAAATCGAAAACATTTGGGTTGCTTATTCCAGTATTCATGGTTATTGCACGATGCAGTGCCATTGCGTGTCCGTTTGTTGGAGGATTGCCTAATAACTGGCATTGTAAATCTGACAGACCGCAACAGTTATACAGTTGTCCACCCTACCTCGTTTATTGCAAGTTGATTGCAGACAGGCCTTGTTTAACTGCAGCCGGCTTCCGATTGCACACCTTGATTTTTAAGAGTCACCATGTCTACTGGGTACACATGGCAGTGGCAGGTAAAAATGACTTTGCAGTTCTCAACACCGGGCGGAAAATGCCTCTCCTCGGTCTAGGAACATGGAAGAGCGAACCTGGCAAGGTAAAACAGGCAGTGGTTTGGGCTTTGCAGGCTGGCTACCGTCACATCGACTGTGCTGCCATCTATGGCAACGAGGTGGAAATTGGCGAGGCTCTGCAGGAGACACTTGGCCCTGACAAAGCCCTGAGGCGAGAGGATGTGTTTATCACCTCTAAGCTGTGGAACACACAGCATCACCCAGAGGATGTTGAGCCCGCTCTGCTTAAGACACTGAAGGAGCTGAGGCTGGAGTACCTGGATCTCTACCTCATCCACTGGCCCTACGCTTTCCAACAAGGTGACGCTCCTTTCCCTAAGTCAGAGGACGGCACCCTGCTGTATGACGACATCGACTACAAGCTGACTTGGGCTGCCATGGAGAAGCTGGTGGGAAAGGGCATGATCAGGGCTATCGGCCTGTCCAACTTCAACAGCAGACAGATAGACGACGTGCTGTCTGTAGCCAACATCAAACCCACTGTGCTTCAGGTGGAAAGCCATCCGTATCTGGCTCAGGTGTTGTTGCTGCAACACTGCCGGGACAGGGGCCTGGTGATGACAGCGTACAGCCCACTGGGGTCACCGGATCGGGCATGGAAGCATCCTGACGAGCCCGTCCTCCTGGATGAACCAGCCATCGGCACCTTGGCCAAGAAGTACAACAAGTCCCCAGCACAAATTATCATTAGATGGCAGACGCAGCGAGGAGTGGTGACGATCCCTAAAAGTGTGACAGAGGCTCGGATCAAAGAGAATATCCAGGTGTTTGACTTTACCCTTGCAGCAGAAGAGATGAAGTGTATAACAGCATTGAACAAAGGCTGGCGCTACATTGTACCAACCATCACAGTTGATGGGAAGCCCGTCCCCAGGGATGCAGGACATCCACACTACCCCTTCATTGACCCCTACTGAGTAAATCCCCAACTGCTGCCCACTTGTGCCttgggaaccccccccccccttcctcaacCCCATCCTAGGCTGTGTCCCAATTAAATAGCTTCATTTTGTCATAATCCTCCTGAGTGACAACTGATTTGAGAAGTATTATTTTTAGGGGAAAGAAGGTTGGTAGAAAAAGTCCAGCTCCTGTCAGATCAGTTTTCATGGTGGTGAGGTGGCGGGGAAAGAGTGCTTTAGAGTGTATTAGGACATAGCATCTGTGTTCTTCGTAATAAAAATGTTTTGTTACTGCCCTTGAA

Function

NR:

description
alcohol dehydrogenase [NADP(+)] isoform X1

GO:

id name namespace
GO:0055114 oxidation-reduction process biological_process
GO:0047939 L-glucuronate reductase activity molecular_function
GO:0004032 alditol molecular_function

KEGG:

id description
K00002 AKR1A1, adh; alcohol dehydrogenase (NADP+)

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036968902.1 False 1433 mRNA 0.50 9 36676157 36685931
XM_021599636.2 True 1668 mRNA 0.49 9 36676390 36685931

Neighbor

gene id symbol gene type direction distance location
LOC110521776 LOC106584062 coding upstream 158924 36503151 ~ 36517233 (+)
LOC118945799 NA coding upstream 159618 36514802 ~ 36516539 (+)
LOC110520956 LOC106583994 coding upstream 187033 36438612 ~ 36489124 (+)
LOC110520994 LOC106584065 coding upstream 613457 36003309 ~ 36062700 (+)
LOC110521770 igfbp-1a2 coding upstream 871086 35800643 ~ 35805071 (+)
LOC110521782 LOC106584054 coding downstream 5485 36691416 ~ 36705489 (+)
LOC118945913 NA coding downstream 15439 36701370 ~ 36701505 (+)
LOC118945805 LOC106584052 coding downstream 49994 36735925 ~ 36740556 (+)
LOC110520996 stxbp3 coding downstream 75011 36760942 ~ 36767311 (+)
LOC110521785 LOC106584051 coding downstream 82328 36768259 ~ 36791935 (+)
G2230020 NA non-coding upstream 28220 36644590 ~ 36647937 (+)
G2230040 NA non-coding upstream 48922 36627015 ~ 36627235 (+)
G2229959 NA non-coding upstream 152473 36520347 ~ 36523684 (+)
G2229564 NA non-coding upstream 517250 36158642 ~ 36158907 (+)
G2229561 NA non-coding upstream 520049 36155686 ~ 36156108 (+)
G2230283 NA non-coding downstream 61493 36747424 ~ 36747831 (+)
G2230359 NA non-coding downstream 118097 36804028 ~ 36804227 (+)
G2230377 NA non-coding downstream 130205 36816136 ~ 36816547 (+)
G2230379 NA non-coding downstream 130685 36816616 ~ 36816816 (+)
LOC110521768 sirt5 other upstream 940757 35693310 ~ 35735400 (+)
G2228777 NA other upstream 1156915 35518234 ~ 35519242 (+)
LOC110521757 NA other upstream 1486006 35181902 ~ 35190209 (+)
G2225948 NA other upstream 3071263 33572140 ~ 33604894 (+)
insl5a rel3 other downstream 899095 37584989 ~ 37587002 (+)
G2231371 NA other downstream 1637429 38315783 ~ 38336981 (+)
G2232661 LOC105030512 other downstream 2104384 38790315 ~ 38790675 (+)
G2232855 LOC100380853 other downstream 2126719 38812650 ~ 38813379 (+)
LOC110521001 LOC106584026 other downstream 2488715 39117484 ~ 39202411 (+)

Expression


Co-expression Network