LOC118945913


Basic Information

Item Value
gene id LOC118945913
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050570.1
NCBI id CM025857.1
chromosome length 46327593
location 36701370 ~ 36701505 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005041066.1
ACTGGCCCTCATCGAAGCCGATTTGGCATACTCTCTCAGCGGCGTCGGTCAACAAAGGAGCTAAAAGCGTCTTTTACCGACGACCGCTGTTTAGATCTCTTGTAGCTTTTcagcaacagtttgggaaagaaCATCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005041066.1 True 136 mRNA 0.49 1 36701370 36701505

Neighbor

gene id symbol gene type direction distance location
LOC110521781 LOC106584055 coding upstream 15439 36676157 ~ 36685931 (+)
LOC110521776 LOC106584062 coding upstream 184137 36503151 ~ 36517233 (+)
LOC118945799 NA coding upstream 184831 36514802 ~ 36516539 (+)
LOC110520956 LOC106583994 coding upstream 212246 36438612 ~ 36489124 (+)
LOC110520994 LOC106584065 coding upstream 638670 36003309 ~ 36062700 (+)
LOC118945805 LOC106584052 coding downstream 34420 36735925 ~ 36740556 (+)
LOC110520996 stxbp3 coding downstream 59437 36760942 ~ 36767311 (+)
LOC110521785 LOC106584051 coding downstream 66754 36768259 ~ 36791935 (+)
LOC110521788 cef10 coding downstream 361388 37062893 ~ 37065854 (+)
insl5a rel3 coding downstream 883484 37584989 ~ 37587002 (+)
G2230020 NA non-coding upstream 53433 36644590 ~ 36647937 (+)
G2230040 NA non-coding upstream 74135 36627015 ~ 36627235 (+)
G2229959 NA non-coding upstream 177686 36520347 ~ 36523684 (+)
G2229564 NA non-coding upstream 542463 36158642 ~ 36158907 (+)
G2229561 NA non-coding upstream 545262 36155686 ~ 36156108 (+)
G2230283 NA non-coding downstream 45919 36747424 ~ 36747831 (+)
G2230359 NA non-coding downstream 102523 36804028 ~ 36804227 (+)
G2230377 NA non-coding downstream 114631 36816136 ~ 36816547 (+)
G2230379 NA non-coding downstream 115111 36816616 ~ 36816816 (+)
LOC110521770 igfbp-1a2 other upstream 898402 35800643 ~ 35805071 (+)
LOC110521768 sirt5 other upstream 965970 35693310 ~ 35735400 (+)
G2228777 NA other upstream 1182128 35518234 ~ 35519242 (+)
LOC110521757 NA other upstream 1511219 35181902 ~ 35190209 (+)
G2225948 NA other upstream 3096476 33572140 ~ 33604894 (+)
G2231371 NA other downstream 1621855 38315783 ~ 38336981 (+)
G2232661 LOC105030512 other downstream 2088810 38790315 ~ 38790675 (+)
G2232855 LOC100380853 other downstream 2111145 38812650 ~ 38813379 (+)
LOC110521001 LOC106584026 other downstream 2473141 39117484 ~ 39202411 (+)

Expression


Co-expression Network