LOC110521794


Basic Information

Item Value
gene id LOC110521794
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050570.1
NCBI id CM025857.1
chromosome length 46327593
location 37828066 ~ 37829673 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_002473213.2
cagccaGACaaacaggagaaggagagagaagaaacagagaTACTAGCTTACAAGTAGCACGCATTGGACAGGAGACAGATCGTCAGACCTCAGGTGGAAAAGTCCTTCTAAAGGAGAAGATCTTACAGCACTGAATCTCTTTACAGTGAATATCTACTCATCATTGGGCCGTACTGTACTACTATAGTGAGATGCTATAACCTGAGCACTCCGTATAAACGTTTTTGGCTCTAGGTGCTCTGAGATCAAACCTGCTCTTCCTTGGACAGAGGAAGTCATTTCTTTCCAACAGCCAATCAGCTATAGTGTGATGATGTCCAGCCTGGCACTGCCCTCCAGGCCAATCTCTCCCTGCTACCTCTACCACTCCTGGATCGGTCTAAAAGCGGTTTCTCTGTCTGACAACTCTCCACTCCTAAAGATTGGCCGCTTCGTGGGCGTAGGCGTGAACCTATTCAAGTCaATATGGAGAGCTGCGAAACTGCGGTCCCAGTAAATGTCCCAAGAGACTGCTGGCACATGCTTGTATGCCATGGGTTGTATGTGTACTTACTGTATGTTAGCAAAAGTTGTACACAATGTAGGCTACAAACGTATTACAACTGTATCATGCCAATCCTTCTCCTGGAGGTatgctgggtgtgcaggcttctgttccagcccagcactaacacacctgattcaacttatcAAACCTAATGAGTTGATAAAACTGTGTATTATTGCTGGTCTGGAATAGAAGTGTGCTCACCAAGTAGATCAGGGAGGGGAGCAAGGTTGGTCACCTCTGGTATGGACTTTTTTGTTCACCCAAAATTATTCTTTAGTAATAACAGCCTTCTTACTAAGATGTCTAACATTCACAAACAAGTTCATTATTTGTATATTTTGAAGTTATATTTTTTTCAACATAAAAACATTATTCAAGATGAACTAGGGTCAATGTTCATTCACCACAGATCACAACCCTGCAATAAAAAGACCGAAGGGGGATCTGTCTCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_002473213.2 True 1002 mRNA 0.44 3 37828066 37829673

Neighbor

gene id symbol gene type direction distance location
LOC110521793 LOC106584037 coding downstream 9736 37730498 ~ 37818330 (-)
LOC110520999 sgip1 coding downstream 129100 37588048 ~ 37698966 (-)
pars2 LOC106584039 coding downstream 265283 37560230 ~ 37562783 (-)
LOC110520997 LOC106584040 coding downstream 268831 37549840 ~ 37559235 (-)
LOC110521791 LOC106584041 coding downstream 305002 37498832 ~ 37523064 (-)
LOC118945821 LOC106584037 coding upstream 94173 37923846 ~ 38011831 (-)
LOC110521795 LOC106584036 coding upstream 215858 38045531 ~ 38121078 (-)
LOC110521797 dnajc6 coding upstream 323095 38152766 ~ 38213493 (-)
LOC110521798 LOC106584033 coding upstream 387254 38216927 ~ 38221934 (-)
LOC110521000 LOC106584032 coding upstream 458293 38287397 ~ 38378117 (-)
G2232003 NA non-coding downstream 106208 37721628 ~ 37721858 (-)
G2232001 NA non-coding downstream 108428 37719080 ~ 37719638 (-)
G2231993 NA non-coding downstream 121567 37706237 ~ 37706499 (-)
G2231991 NA non-coding downstream 125120 37702733 ~ 37702946 (-)
G2232312 LOC106600668 non-coding upstream 312299 38141972 ~ 38143264 (-)
G2232321 NA non-coding upstream 326913 38156586 ~ 38156986 (-)
G2232342 NA non-coding upstream 371948 38201621 ~ 38202115 (-)
LOC110521777 LOC106584061 other downstream 1303269 36520352 ~ 36541228 (-)
G2229647 NA other downstream 1613681 36213146 ~ 36214385 (-)
G2229175 NA other downstream 2028709 35798804 ~ 35799357 (-)
G2227801 NA other downstream 3285447 34542217 ~ 34542619 (-)
G2232820 NA other upstream 935749 38765422 ~ 38767903 (-)
LOC110521806 NA other upstream 1009233 38838904 ~ 38856693 (-)
G2234611 NA other upstream 2127242 39956915 ~ 39993914 (-)
G2234837 NA other upstream 2455981 40285654 ~ 40286282 (-)
G2237502 NA other upstream 4451083 42280756 ~ 42281362 (-)

Expression


Co-expression Network