LOC118945789


Basic Information

Item Value
gene id LOC118945789
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050570.1
NCBI id CM025857.1
chromosome length 46327593
location 38038367 ~ 38056640 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005040901.1
CAGATGAAGACACATGTTTGGCTGCCAACACAGTTATCAGTGTGTTTAATCGGAAGATTGTGCGTGCATCCAAAAAGGTCATGTTGATGTTCCTAGTGGAGTATCCCTGGCTGTTCTGAGCCTTGACCGTCACAGAGTGGACCTCCTCTCGCCACTCAAAGCGGTAGGAGGACACCAGGCCTATCCGCTCCTCAGTCACAATGCCCCCAGAGGCCTGGTGCTGTACTACAAGGCCCTCCACACAGCTATGGACTGTACCTTGAAGAGAAGAGTGACGTTAGTCTGGTTCCTTGCTGGATCCTCCTGAAACACTCGCCAGAAATCAGGACCCTGGTCAGGAGCTGAGAGAACAGAACATAGATATTACAGCTCTGTGCATGTGCATGCTAGCATgcacgcttgtgtgtgtgtttatgtacctATGTCCTGAGGCTTTCATTTTCTATCAGATCTAAACATCAGAGAAGCTCATATTAAAGTGCTGGCTGTAGCACTCAATAACAGCGCTTAGACAGACACCACGCAAGGTCACTGTTAGATCAGGGTCAGAAAGAGCTTATACCACACAACAAACACTGGATAATGACGGGTTTGAAATGACCCATCCATTGTGGTTGTGAGAGTTAATGTGCTATTCATACACAGTAGGTCAGACTTGATAGTTGTGGTGTGCTGGCGCAATTATAAGAGAACTTTCAAGACAGCAGCTTAATTCCCCTCAAAAGTGTATTGCTGATGCGTTTTGTCAAAGCAACTTTGTCAAAACTGTTATGTACAATACATGTGTTAACTTGCtgaatagattttttttctttaatgagacTAAATTGTATAAATGCAGTTTCAATGACATAGATGAGACGgagacatactgtacacacctcTGCT

Function

NR:

description
PREDICTED: leptin receptor-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005040901.1 True 888 mRNA 0.45 3 38038367 38056640

Neighbor

gene id symbol gene type direction distance location
insl5a rel3 coding upstream 451366 37584989 ~ 37587002 (+)
LOC110521788 cef10 coding upstream 972513 37062893 ~ 37065854 (+)
LOC110521785 LOC106584051 coding upstream 1246432 36768259 ~ 36791935 (+)
LOC110520996 stxbp3 coding upstream 1271056 36760942 ~ 36767311 (+)
LOC118945805 LOC106584052 coding upstream 1297811 36735925 ~ 36740556 (+)
LOC110521799 NA coding downstream 166472 38223112 ~ 38224803 (+)
LOC110521800 LOC100286690 coding downstream 173812 38230452 ~ 38285097 (+)
LOC118945881 NA coding downstream 204599 38261239 ~ 38261385 (+)
LOC110521807 NA coding downstream 777144 38833784 ~ 38838725 (+)
LOC110521001 LOC106584026 coding downstream 1060844 39117484 ~ 39202411 (+)
G2231021 NA non-coding upstream 311569 37726591 ~ 37726798 (+)
G2231016 NA non-coding upstream 317943 37720184 ~ 37720424 (+)
G2231002 NA non-coding upstream 337929 37700138 ~ 37700438 (+)
G2231001 NA non-coding upstream 338351 37699155 ~ 37700016 (+)
G2230908 NA non-coding upstream 372941 37588056 ~ 37665426 (+)
G2231271 NA non-coding downstream 22530 38079170 ~ 38079627 (+)
G2231311 NA non-coding downstream 114444 38171084 ~ 38172018 (+)
G2231329 NA non-coding downstream 145671 38202311 ~ 38202512 (+)
G2231333 NA non-coding downstream 152828 38209468 ~ 38210015 (+)
G2231334 NA non-coding downstream 156590 38213230 ~ 38213524 (+)
LOC110521770 igfbp-1a2 other upstream 2235399 35800643 ~ 35805071 (+)
LOC110521768 sirt5 other upstream 2302967 35693310 ~ 35735400 (+)
G2228777 NA other upstream 2519125 35518234 ~ 35519242 (+)
LOC110521757 NA other upstream 2848216 35181902 ~ 35190209 (+)
G2231371 NA other downstream 266720 38315783 ~ 38336981 (+)
G2232661 LOC105030512 other downstream 733675 38790315 ~ 38790675 (+)
G2232855 LOC100380853 other downstream 756010 38812650 ~ 38813379 (+)
LOC110521817 LOC106584021 other downstream 1743633 39800038 ~ 39812756 (+)

Expression


Co-expression Network