Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC118945881 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_050570.1 |
| NCBI id | CM025857.1 |
| chromosome length | 46327593 |
| location | 38261239 ~ 38261385 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| LOC118945881 | True | 147 | mRNA | 0.52 | 1 | 38261239 | 38261385 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110521799 | NA | coding | upstream | 36436 | 38223112 ~ 38224803 (+) |
| LOC118945789 | NA | coding | upstream | 204599 | 38038367 ~ 38056640 (+) |
| insl5a | rel3 | coding | upstream | 674238 | 37584989 ~ 37587002 (+) |
| LOC110521788 | cef10 | coding | upstream | 1195385 | 37062893 ~ 37065854 (+) |
| LOC110521785 | LOC106584051 | coding | upstream | 1469304 | 36768259 ~ 36791935 (+) |
| LOC110521807 | NA | coding | downstream | 572399 | 38833784 ~ 38838725 (+) |
| LOC110521001 | LOC106584026 | coding | downstream | 856099 | 39117484 ~ 39202411 (+) |
| LOC110521810 | LOC106584025 | coding | downstream | 977225 | 39238610 ~ 39332571 (+) |
| LOC110521814 | dmrt2b | coding | downstream | 1451639 | 39713024 ~ 39722927 (+) |
| LOC110521815 | fam183a | coding | downstream | 1498516 | 39759901 ~ 39761629 (+) |
| G2231336 | NA | non-coding | upstream | 43837 | 38216934 ~ 38217402 (+) |
| G2231334 | NA | non-coding | upstream | 47715 | 38213230 ~ 38213524 (+) |
| G2231333 | NA | non-coding | upstream | 51224 | 38209468 ~ 38210015 (+) |
| G2231329 | NA | non-coding | upstream | 58727 | 38202311 ~ 38202512 (+) |
| G2231231 | NA | non-coding | downstream | 26048 | 38287433 ~ 38288729 (+) |
| G2231371 | NA | non-coding | downstream | 54398 | 38315783 ~ 38336981 (+) |
| G2231398 | NA | non-coding | downstream | 117430 | 38378815 ~ 38379229 (+) |
| G2231400 | LOC106584031 | non-coding | downstream | 120817 | 38382202 ~ 38385740 (+) |
| G2232463 | NA | non-coding | downstream | 213991 | 38475376 ~ 38475620 (+) |
| LOC110521770 | igfbp-1a2 | other | upstream | 2458271 | 35800643 ~ 35805071 (+) |
| LOC110521768 | sirt5 | other | upstream | 2525839 | 35693310 ~ 35735400 (+) |
| G2228777 | NA | other | upstream | 2741997 | 35518234 ~ 35519242 (+) |
| LOC110521757 | NA | other | upstream | 3071088 | 35181902 ~ 35190209 (+) |
| G2232661 | LOC105030512 | other | downstream | 528930 | 38790315 ~ 38790675 (+) |
| G2232855 | LOC100380853 | other | downstream | 551265 | 38812650 ~ 38813379 (+) |
| LOC110521817 | LOC106584021 | other | downstream | 1538888 | 39800038 ~ 39812756 (+) |
