LOC118945819


Basic Information

Item Value
gene id LOC118945819
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050570.1
NCBI id CM025857.1
chromosome length 46327593
location 38775530 ~ 38780089 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005040980.1
CCTGTTGCACCACCAGGGTGCGCTGTCATATCTTTGAGGTGATAGACCTAGGGAACAGCCTGCTCAGTCTGGAGGAATACAACTTCTTTGGGGAGAAGTGTGACAGGGATGCCTGGGCTGCAGTGTTGTGGTCCGGTCTCGAGGTCTCAgtgtcaaatacatttttactcgGATCTTGGACAATGAGGACTTGTAATTTCTTCCCGAGACCAGCGGAGTACAAAACAAATAATTATCAGCTCCAATTAAATCCCTCGCCCCCCTCCCGGTCTCGGCCTTGACTCGGTCCCCCCTCTGGCCTTGGTCCTGACTCATATTTGATTTGCTCTGGTCTTGGTCTCAAACACTGCTGGGCAGTCTGCAAAGTGTGACTCCCTTCCAGAGAACTTTGACACCAGGAAGAACCAGCTGTTGTCAGATCTTCATGGAGCTCAACATGATGGAggccagtgagagggagggagaacacaCAGACCTCAGGTAGTGTACTTTGGAGCCGGTCAGTCTGGAGTCAAGCAACAGGATGCTGAACACGGCCCTGCAGAGGCCCATCACGGCCAGGTCATAGGTCAAAACTCTCAGGGATCAGGAGAACGTCCTGGTCTACACCTACAGAGGATAACACAGGATCTCAACTGTCAATTCCAACTAGGTGAAGGACTAGAATCAACACTATTTAGAGGTTTATTCAACCAACAAGATGATCTTCCActagagcagggtttcccaaactcggtcctggggccctactttggtgcacattttgttttttgcccaagtactacacagctgattcaaataataaaggcttgatgatgagttggttatttgaatcagctgtgtagtgctagggcaaaaaactaaaCGTGCACCCAAGTGGGGCACCAGGAACGAGTATGGGAAACACGAGAGCCCTCAAACttaactctggacctcgaagccagtttcATTGCTttgtttcattgttcccctctaatcaatgactgatttagacctgggacaccaggtgggtgcaattaattatcaggtagaacagaaaaccagcaggctccggaccttgtAGGgcaagagttgaatacccctgcacTCTAATGAGTGTAATACCTTCTAAGTATTTTTGATACACACTAGCTGCTGTTGAGAAACAAACATGGCTGTTTCTTCATGTATCTGATCCATGTTTAACCAACTCTGTTTtcatatattttgtgtgtgtgtgtatatgatagACCTCCAAAGTAACACATTACTGCAAGTTTAGAACTAGTGAGTGTCTATCACATGATGCTGTCATTGATATGCAGCTATCGCCTCCATAAACATGGCAACAGGATCCCCCTGTGAGAATGCCCTGGTCACATGAT

Function

NR:

description
EF-hand calcium-binding domain-containing protein 7, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005040980.1 True 1364 mRNA 0.47 4 38775530 38780089

Neighbor

gene id symbol gene type direction distance location
LOC110521805 pgm1 coding downstream 15567 38747442 ~ 38759963 (-)
LOC110521804 LOC106584030 coding downstream 65469 38513982 ~ 38710061 (-)
LOC110521803 LOC106584031 coding downstream 310939 38384191 ~ 38464591 (-)
LOC110521000 LOC106584032 coding downstream 397413 38287397 ~ 38378117 (-)
LOC110521798 LOC106584033 coding downstream 553596 38216927 ~ 38221934 (-)
LOC110521806 NA coding upstream 58815 38838904 ~ 38856693 (-)
LOC110521808 LOC106584029 coding upstream 82392 38862481 ~ 38864063 (-)
LOC110521809 LOC106584028 coding upstream 370616 39150705 ~ 39155800 (-)
LOC110521002 NA coding upstream 423320 39203409 ~ 39260235 (-)
LOC110521811 NA coding upstream 485650 39265739 ~ 39268766 (-)
G2232828 NA non-coding downstream 673 38774542 ~ 38774857 (-)
G2232826 NA non-coding downstream 3725 38771604 ~ 38771805 (-)
G2232823 NA non-coding downstream 5934 38769392 ~ 38769596 (-)
G2232817 NA non-coding downstream 12799 38761062 ~ 38762731 (-)
G2232811 NA non-coding downstream 30092 38744900 ~ 38745438 (-)
G2232835 NA non-coding upstream 1455 38781544 ~ 38781755 (-)
G2232836 NA non-coding upstream 1910 38781999 ~ 38782217 (-)
G2232849 NA non-coding upstream 21000 38801089 ~ 38801391 (-)
G2233503 NA non-coding upstream 309350 39089439 ~ 39090952 (-)
G2232820 NA other downstream 7627 38765422 ~ 38767903 (-)
LOC110521791 LOC106584041 other downstream 1252524 37498832 ~ 37523064 (-)
LOC110521777 LOC106584061 other downstream 2250733 36520352 ~ 36541228 (-)
G2229647 NA other downstream 2561145 36213146 ~ 36214385 (-)
G2229175 NA other downstream 2976173 35798804 ~ 35799357 (-)
G2234611 NA other upstream 1176826 39956915 ~ 39993914 (-)
G2234837 NA other upstream 1505565 40285654 ~ 40286282 (-)
G2237502 NA other upstream 3500667 42280756 ~ 42281362 (-)
G2237814 NA other upstream 3962805 42742894 ~ 42743592 (-)

Expression


Co-expression Network