trnaa-ugc-194


Basic Information

Item Value
gene id trnaa-ugc-194
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050570.1
NCBI id CM025857.1
chromosome length 46327593
location 39789157 ~ 39789229 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>trnaa-ugc-194
TCccttgtggctcagttggtagagcacggcgcttgcaacgccagggttgtgggttcaattcccacggggGGCT

Function

NR:

description
Deoxyribonuclease gamma precursor

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnaa-ugc-194 True 73 mRNA 0.62 1 39789157 39789229

Neighbor

gene id symbol gene type direction distance location
LOC110521815 fam183a coding upstream 27528 39759901 ~ 39761629 (+)
LOC110521814 dmrt2b coding upstream 66230 39713024 ~ 39722927 (+)
LOC110521810 LOC106584025 coding upstream 456586 39238610 ~ 39332571 (+)
LOC110521001 LOC106584026 coding upstream 586746 39117484 ~ 39202411 (+)
LOC110521807 NA coding upstream 950432 38833784 ~ 38838725 (+)
LOC110521817 LOC106584021 coding downstream 10809 39800038 ~ 39812756 (+)
LOC110521820 LOC106584018 coding downstream 88616 39877845 ~ 39906318 (+)
LOC110521821 LOC106584017 coding downstream 122288 39911517 ~ 39918494 (+)
LOC110521822 pr38a coding downstream 131635 39920864 ~ 39924501 (+)
LOC110521823 pomgnt1 coding downstream 141777 39931006 ~ 39957917 (+)
G2233878 NA non-coding upstream 145290 39643647 ~ 39643867 (+)
G2233874 NA non-coding upstream 147922 39640921 ~ 39641235 (+)
G2233867 NA non-coding upstream 153673 39635264 ~ 39635484 (+)
G2233859 NA non-coding upstream 161190 39627554 ~ 39627967 (+)
G2233304 NA non-coding upstream 176258 39563375 ~ 39612899 (+)
G2234002 LOC106584020 non-coding downstream 61368 39850597 ~ 39852270 (+)
G2234003 LOC106584020 non-coding downstream 63221 39852450 ~ 39855097 (+)
G2234031 NA non-coding downstream 121769 39910998 ~ 39911462 (+)
G2234224 NA non-coding downstream 140083 39929312 ~ 39929520 (+)
G2232855 LOC100380853 other upstream 975778 38812650 ~ 38813379 (+)
G2232661 LOC105030512 other upstream 998482 38790315 ~ 38790675 (+)
G2231371 NA other upstream 1452176 38315783 ~ 38336981 (+)
insl5a rel3 other upstream 2202155 37584989 ~ 37587002 (+)
pik3r3b LOC106584012 other downstream 354392 40143590 ~ 40468579 (+)
LOC110521828 LOC106584006 other downstream 1313209 41101017 ~ 41158001 (+)
G2236045 NA other downstream 1596431 41385660 ~ 41385993 (+)
LOC110521840 LOC106583968 other downstream 2761091 42548328 ~ 42554269 (+)

Expression


Co-expression Network